CX297689

Overview
NameCX297689
Unique NameCX297689
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length763
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX297689 vs. ExPASy Swiss-Prot
Match: 1433_CANAL (14-3-3 protein homolog OS=Candida albicans GN=BMH1 PE=1 SV=2)

HSP 1 Score: 195.667 bits (496), Expect = 2.372e-49
Identity = 99/146 (67.81%), Postives = 117/146 (80.14%), Query Frame = 3
Query:   12 NLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWT--SDLPEEGGEQSKGDEVQA 443
            +LI S+ +GES VFYYKMKGDY+RYLAEF  A+ RKEAAD SL+          +ELPPTHPIRLGLALNFSVFYYEILNSP+RACHLAKQAFD+A+A+L++L+E+SYKDSTLIMQLLRDNLTLWT  S+ P    EQ +  +  A
Sbjct:  108 HLITSAQTGESKVFYYKMKGDYHRYLAEFAIAEKRKEAADLSLEAYKAASDVAVTELPPTHPIRLGLALNFSVFYYEILNSPDRACHLAKQAFDDAVADLETLSEDSYKDSTLIMQLLRDNLTLWTDLSEAPAATEEQQQSSQAPA 253          
BLAST of CX297689 vs. ExPASy Swiss-Prot
Match: 14334_SOLLC (14-3-3 protein 4 OS=Solanum lycopersicum GN=TFT4 PE=2 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 2.372e-49
Identity = 101/155 (65.16%), Postives = 121/155 (78.06%), Query Frame = 3
Query:   12 NLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSKGDEVQAES*PGMHEHQE 476
            NLIPS+++ ES VF+ KMKGDY+RYLAEFK   +RKEAA+++L           +EL PTHPIRLGLALNFSVFYYEILNSP+RAC+LAKQAFDEAI+ELD+L EESYKDSTLIMQLLRDNLTLWTSD  ++      GD+++  S P   E Q+
Sbjct:  111 NLIPSASTAESKVFHLKMKGDYHRYLAEFKTGTERKEAAENTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDNADD-----VGDDIKEASKPESGEGQQ 260          
BLAST of CX297689 vs. ExPASy Swiss-Prot
Match: 14332_MAIZE (14-3-3-like protein GF14-12 OS=Zea mays GN=GRF2 PE=2 SV=2)

HSP 1 Score: 195.667 bits (496), Expect = 2.372e-49
Identity = 96/136 (70.59%), Postives = 113/136 (83.09%), Query Frame = 3
Query:   12 NLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQ 419
            +L+PSST+ ES VFY KMKGDYYRYLAEFK   +RK+AA++++           +EL PTHPIRLGLALNFSVFYYEILNSP+RAC LAKQAFDEAI+ELD+L+EESYKDSTLIMQLL DNLTLWTSD+ E+  E+
Sbjct:  113 HLVPSSTAPESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACSLAKQAFDEAISELDTLSEESYKDSTLIMQLLHDNLTLWTSDISEDPAEE 248          
BLAST of CX297689 vs. ExPASy Swiss-Prot
Match: 14331_SOLTU (14-3-3-like protein OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 2.372e-49
Identity = 102/151 (67.55%), Postives = 119/151 (78.81%), Query Frame = 3
Query:   12 NLIPSSTSGESTVFYYKMKGDYYRYLAEFK-GADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPE-------EGGEQSKGDEVQ 440
            +L+PS+++ ES VFY KMKGDY+RYLAEFK GA +RKEAA+++L           +EL PTHPIRLGLALNFSVFYYEILNSP+RAC+LAKQAFD+AIAELD+L EESYKDSTLIMQLLRDNLTLWTSD  +       EG +Q  GD  Q
Sbjct:  109 HLVPSASTAESKVFYLKMKGDYHRYLAEFKTGARERKEAAENTLLAYKSAQDIALAELTPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDDAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDTTDDAEDEIREGSKQESGDGQQ 259          
BLAST of CX297689 vs. ExPASy Swiss-Prot
Match: RAD24_SCHPO (DNA damage checkpoint protein rad24 OS=Schizosaccharomyces pombe GN=rad24 PE=1 SV=2)

HSP 1 Score: 194.512 bits (493), Expect = 5.284e-49
Identity = 96/128 (75.00%), Postives = 108/128 (84.38%), Query Frame = 3
Query:   12 NLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSD 395
            +LIP++ S ES VFYYKMKGDYYRYLAEF   + R+ +AD SL+          +EL PTHPIRLGLALNFSVFYYEILNSP+RAC+LAKQAFDEAI+ELDSL+EESYKDSTLIMQLLRDNLTLWTSD
Sbjct:  109 HLIPNAASAESKVFYYKMKGDYYRYLAEFAVGEKRQHSADQSLEGYKAASEIATAELAPTHPIRLGLALNFSVFYYEILNSPDRACYLAKQAFDEAISELDSLSEESYKDSTLIMQLLRDNLTLWTSD 236          
BLAST of CX297689 vs. ExPASy Swiss-Prot
Match: 1433_TRIHA (14-3-3 protein homolog OS=Trichoderma harzianum PE=2 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 5.284e-49
Identity = 96/131 (73.28%), Postives = 111/131 (84.73%), Query Frame = 3
Query:   12 NLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPE 404
            +LIPS+ SGES VFY+K+KGDY+RYLAEF   D RK++AD SL+          +ELPPTHPIRLGLALNFSVFYYEILN+P++ACHLAKQAFD+AIAELD+L+EESYKDSTLIMQLLRDNLTLWTS   E
Sbjct:  106 HLIPSAKSGESKVFYHKIKGDYHRYLAEFAIGDRRKDSADKSLEAYKAATEVAQTELPPTHPIRLGLALNFSVFYYEILNAPDQACHLAKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSSEAE 236          
BLAST of CX297689 vs. ExPASy Swiss-Prot
Match: 14337_ARATH (14-3-3-like protein GF14 nu OS=Arabidopsis thaliana GN=GRF7 PE=1 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 5.284e-49
Identity = 101/157 (64.33%), Postives = 120/157 (76.43%), Query Frame = 3
Query:   12 NLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSKGDEVQAES*PGMHEHQEEK 482
            +L+P+++  ES VFY KMKGDY+RYLAEFK   +RKEAA+ +L           ++L PTHPIRLGLALNFSVFYYEILNSP+RAC LAKQAFDEAI+ELD+L EESYKDSTLIMQLLRDNLTLW SD+ +E G    GDE++  S    HE +E K
Sbjct:  110 HLVPTASLAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLVAYKSAQDIALADLAPTHPIRLGLALNFSVFYYEILNSPDRACSLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWNSDINDEAG----GDEIKEAS---KHEPEEGK 259          
BLAST of CX297689 vs. ExPASy Swiss-Prot
Match: 1433_DICDI (14-3-3-like protein OS=Dictyostelium discoideum GN=fttB PE=1 SV=2)

HSP 1 Score: 193.741 bits (491), Expect = 9.014e-49
Identity = 103/150 (68.67%), Postives = 117/150 (78.00%), Query Frame = 3
Query:   12 NLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSKGDEVQAES*PGM 461
            +LI SS SGES VFYYKMKGDY+RYLAEF   + RK +A+ SL           +ELPPTHPIRLGLALNFSVFYYEILNSP+RAC+LAK AFD+AIAELD+L+E+SYKDSTLIMQLLRDNLTLWTSD+      Q  GD+ Q E  PGM
Sbjct:  106 HLIVSSASGESKVFYYKMKGDYFRYLAEFATGNPRKTSAESSLIAYKAASDIAVTELPPTHPIRLGLALNFSVFYYEILNSPDRACNLAKTAFDDAIAELDTLSEDSYKDSTLIMQLLRDNLTLWTSDVHNMEKNQD-GDDDQNE--PGM 252          
BLAST of CX297689 vs. ExPASy Swiss-Prot
Match: 14331_ORYSJ (14-3-3-like protein GF14-A OS=Oryza sativa subsp. japonica GN=GF14A PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.623e-48
Identity = 93/137 (67.88%), Postives = 112/137 (81.75%), Query Frame = 3
Query:   15 LIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSK 425
            L+P++ + ++ VFY KMKGDY+RYLAEFK   +RK+AAD +L            EL PTHPIRLGLALNFSVFYYEILNSP+RAC LAKQAFDEAI+ELD+L EESYKDSTLIMQLLRDNLTLWTSD+ ++GG++ +
Sbjct:  119 LVPAAAAVDAKVFYLKMKGDYHRYLAEFKTGAERKDAADATLAAYQAAQDIAMKELSPTHPIRLGLALNFSVFYYEILNSPDRACTLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGGDEMR 255          
BLAST of CX297689 vs. ExPASy Swiss-Prot
Match: 1433_SPIOL (14-3-3-like protein (Fragment) OS=Spinacia oleracea PE=2 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 3.425e-48
Identity = 94/135 (69.63%), Postives = 111/135 (82.22%), Query Frame = 3
Query:   15 LIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQ 419
            L+P+++SG+S VFY KMKGDY+RYLAEFK    RKEAA+ +L           +EL PTHPIRLGLALNFSVFYYEILNSP+RAC+LAKQAF EAIAELD+L E+SYKDSTLIMQLLRDNLTLWTSD+ +E  ++
Sbjct:   67 LVPAASSGDSKVFYLKMKGDYHRYLAEFKTGAQRKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFVEAIAELDTLGEDSYKDSTLIMQLLRDNLTLWTSDMQDEAADE 201          
The following BLAST results are available for this feature:
BLAST of CX297689 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
1433_CANAL2.372e-4967.8114-3-3 protein homolog OS=Candida albicans GN=BMH1... [more]
14334_SOLLC2.372e-4965.1614-3-3 protein 4 OS=Solanum lycopersicum GN=TFT4 P... [more]
14332_MAIZE2.372e-4970.5914-3-3-like protein GF14-12 OS=Zea mays GN=GRF2 PE... [more]
14331_SOLTU2.372e-4967.5514-3-3-like protein OS=Solanum tuberosum PE=2 SV=1[more]
RAD24_SCHPO5.284e-4975.00DNA damage checkpoint protein rad24 OS=Schizosacch... [more]
1433_TRIHA5.284e-4973.2814-3-3 protein homolog OS=Trichoderma harzianum PE... [more]
14337_ARATH5.284e-4964.3314-3-3-like protein GF14 nu OS=Arabidopsis thalian... [more]
1433_DICDI9.014e-4968.6714-3-3-like protein OS=Dictyostelium discoideum GN... [more]
14331_ORYSJ2.623e-4867.8814-3-3-like protein GF14-A OS=Oryza sativa subsp. ... [more]
1433_SPIOL3.425e-4869.6314-3-3-like protein (Fragment) OS=Spinacia olerace... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC06004B11SK RindPdig24 Citrus clementina cDNA clone C06004B11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX297689 ID=CX297689; Name=CX297689; organism=Citrus clementina; type=EST; length=763bp
GAGGTTGATGAAACCTAATCCCATCCTCCACATCTGGAGAATCAACCGTG
TTTTACTATAAGATGAAAGGAGATTATTACCGTTACCTAGCTGAGTTCAA
AGGTGCTGATGATCGTAAGGAAGCTGCAGATCATTCACTTAAGGCTTACG
AGGCTGCTACAGCTGCAGCAGCCTCAGAGTTACCCCCAACTCATCCAATC
AGACTTGGCCTGGCTCTTAACTTTTCTGTTTTCTACTATGAGATTTTGAA
CTCACCTGAGAGGGCTTGCCACCTGGCTAAACAAGCATTTGATGAGGCGA
TTGCTGAACTTGATAGCCTTAATGAAGAGTCCTACAAGGACAGCACCCTT
ATTATGCAGCTTCTTCGGGATAATCTCACCTTGTGGACCTCGGATCTACC
GGAGGAGGGAGGTGAGCAATCTAAAGGTGATGAAGTTCAAGCAGAGAGCT
AGCCGGGGATGCATGAGCATCAGGAGGAGAAATTGTGCTAGTTGGGTTCT
AATATCTATTAGTATTAGTAGTATAGGGATTGAAAGAACATTTGGCTTGT
ATAATACTTATTACATGTTTTTAATTTCAGGTTGTTGTGCTATTTTCTGT
TTACAAAAAAAAAAGGCCGCTCTTTGTGCTGCAGCTAGAGTATATAAATT
CTGAAAGAGAGTAAGCGACTAAGCGCTATAGAAAAGGACAAAAGAGAGAG
AGGCTGGAGAAATGGCTACTTGCTTGTGGATTCATCCGCATCAGCATCAG
CCTCAGCATCATC
back to top