CX297689

Overview
NameCX297689
Unique NameCX297689
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length763
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX297689 vs. ExPASy Swiss-Prot
Match: 1433B_MACFA (14-3-3 protein beta/alpha OS=Macaca fascicularis GN=YWHAB PE=2 SV=3)

HSP 1 Score: 180.644 bits (457), Expect = 7.897e-45
Identity = 89/139 (64.03%), Postives = 106/139 (76.26%), Query Frame = 3 
Query:   15 LIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSKGD 431
            LIP++T  ES VFY KMKGDY+RYL+E    D+++    +S +           E+ PTHPIRLGLALNFSVFYYEILNSPE+AC LAK AFDEAIAELD+LNEESYKDSTLIMQLLRDNLTLWTS+   + G+  +G+
Sbjct:  107 LIPNATQPESKVFYLKMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGDEGDAGEGE 245
[Close]
BLAST of CX297689 vs. ExPASy Swiss-Prot
Match: 1433B_HUMAN (14-3-3 protein beta/alpha OS=Homo sapiens GN=YWHAB PE=1 SV=3)

HSP 1 Score: 180.644 bits (457), Expect = 7.897e-45
Identity = 89/139 (64.03%), Postives = 106/139 (76.26%), Query Frame = 3 
Query:   15 LIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSKGD 431
            LIP++T  ES VFY KMKGDY+RYL+E    D+++    +S +           E+ PTHPIRLGLALNFSVFYYEILNSPE+AC LAK AFDEAIAELD+LNEESYKDSTLIMQLLRDNLTLWTS+   + G+  +G+
Sbjct:  107 LIPNATQPESKVFYLKMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGDEGDAGEGE 245
[Close]
BLAST of CX297689 vs. ExPASy Swiss-Prot
Match: 1433B_BOVIN (14-3-3 protein beta/alpha OS=Bos taurus GN=YWHAB PE=1 SV=2)

HSP 1 Score: 180.644 bits (457), Expect = 7.897e-45
Identity = 89/139 (64.03%), Postives = 106/139 (76.26%), Query Frame = 3 
Query:   15 LIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSKGD 431
            LIP++T  ES VFY KMKGDY+RYL+E    D+++    +S +           E+ PTHPIRLGLALNFSVFYYEILNSPE+AC LAK AFDEAIAELD+LNEESYKDSTLIMQLLRDNLTLWTS+   + G+  +G+
Sbjct:  107 LIPNATQPESKVFYLKMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGDEGDAGEGE 245
[Close]
BLAST of CX297689 vs. ExPASy Swiss-Prot
Match: 143B1_ONCMY (14-3-3 protein beta/alpha-1 OS=Oncorhynchus mykiss PE=2 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 2.298e-44
Identity = 88/139 (63.31%), Postives = 105/139 (75.54%), Query Frame = 3 
Query:   15 LIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSKGD 431
            LI ++T  ES VFY KMKGDYYRYL+E    D +K   ++S +           ++ PTHPIRLGLALNFSVFYYEILNSPE+AC LAK AFDEAIAELD+LNE+SYKDSTLIMQLLRDNLTLWTS+   + G+  +G+
Sbjct:  105 LIANATQAESKVFYLKMKGDYYRYLSEVASGDSKKTTVENSQQAYQEAFDISKKDMQPTHPIRLGLALNFSVFYYEILNSPEQACSLAKAAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSENQGDEGDAGEGE 243
[Close]
BLAST of CX297689 vs. ExPASy Swiss-Prot
Match: 1433T_XENLA (14-3-3 protein theta OS=Xenopus laevis GN=ywhaq PE=2 SV=2)

HSP 1 Score: 179.104 bits (453), Expect = 2.298e-44
Identity = 92/140 (65.71%), Postives = 106/140 (75.71%), Query Frame = 3 
Query:   15 LIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSKGDE 434
            LI ++T+ ES VFY KMKGDY+RYLAE    DDRK+  ++S             E+ PTHPIRLGLALNFSVFYYEILN+PE AC LAK AFDEAIAELD+LNE+SYKDSTLIMQLLRDNLTLWTSD   E  + ++G E
Sbjct:  105 LIANATNPESKVFYLKMKGDYFRYLAEVACGDDRKQTIENSQGAYQEAFDISKKEMQPTHPIRLGLALNFSVFYYEILNNPELACTLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDSAGEECDAAEGAE 244
[Close]
BLAST of CX297689 vs. ExPASy Swiss-Prot
Match: 1433T_RAT (14-3-3 protein theta OS=Rattus norvegicus GN=Ywhaq PE=1 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 2.298e-44
Identity = 92/140 (65.71%), Postives = 106/140 (75.71%), Query Frame = 3 
Query:   15 LIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSKGDE 434
            LI ++T+ ES VFY KMKGDY+RYLAE    DDRK+  ++S             E+ PTHPIRLGLALNFSVFYYEILN+PE AC LAK AFDEAIAELD+LNE+SYKDSTLIMQLLRDNLTLWTSD   E  + ++G E
Sbjct:  105 LIANATNPESKVFYLKMKGDYFRYLAEVACGDDRKQTIENSQGAYQEAFDISKKEMQPTHPIRLGLALNFSVFYYEILNNPELACTLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDSAGEECDAAEGAE 244
[Close]
BLAST of CX297689 vs. ExPASy Swiss-Prot
Match: 1433T_RABIT (14-3-3 protein theta OS=Oryctolagus cuniculus GN=YWHAQ PE=2 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 2.298e-44
Identity = 92/140 (65.71%), Postives = 106/140 (75.71%), Query Frame = 3 
Query:   15 LIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSKGDE 434
            LI ++T+ ES VFY KMKGDY+RYLAE    DDRK+  ++S             E+ PTHPIRLGLALNFSVFYYEILN+PE AC LAK AFDEAIAELD+LNE+SYKDSTLIMQLLRDNLTLWTSD   E  + ++G E
Sbjct:  105 LIANATNPESKVFYLKMKGDYFRYLAEVACGDDRKQTIENSQGAYQEAFDISKKEMQPTHPIRLGLALNFSVFYYEILNNPELACTLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDSAGEECDAAEGAE 244
[Close]
BLAST of CX297689 vs. ExPASy Swiss-Prot
Match: 1433T_MOUSE (14-3-3 protein theta OS=Mus musculus GN=Ywhaq PE=1 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 2.298e-44
Identity = 92/140 (65.71%), Postives = 106/140 (75.71%), Query Frame = 3 
Query:   15 LIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSKGDE 434
            LI ++T+ ES VFY KMKGDY+RYLAE    DDRK+  ++S             E+ PTHPIRLGLALNFSVFYYEILN+PE AC LAK AFDEAIAELD+LNE+SYKDSTLIMQLLRDNLTLWTSD   E  + ++G E
Sbjct:  105 LIANATNPESKVFYLKMKGDYFRYLAEVACGDDRKQTIENSQGAYQEAFDISKKEMQPTHPIRLGLALNFSVFYYEILNNPELACTLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDSAGEECDAAEGAE 244
[Close]
BLAST of CX297689 vs. ExPASy Swiss-Prot
Match: 1433T_CHICK (14-3-3 protein theta OS=Gallus gallus GN=YWHAQ PE=2 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 2.298e-44
Identity = 92/140 (65.71%), Postives = 106/140 (75.71%), Query Frame = 3 
Query:   15 LIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSKGDE 434
            LI ++T+ ES VFY KMKGDY+RYLAE    DDRK+  ++S             E+ PTHPIRLGLALNFSVFYYEILN+PE AC LAK AFDEAIAELD+LNE+SYKDSTLIMQLLRDNLTLWTSD   E  + ++G E
Sbjct:  105 LIANATNPESKVFYLKMKGDYFRYLAEVACGDDRKQTIENSQGAYQEAFDISKKEMQPTHPIRLGLALNFSVFYYEILNNPELACTLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDSAGEECDAAEGAE 244
[Close]
BLAST of CX297689 vs. ExPASy Swiss-Prot
Match: 1433Z_XENTR (14-3-3 protein zeta OS=Xenopus tropicalis GN=ywhaz PE=2 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 3.001e-44
Identity = 91/140 (65.00%), Postives = 103/140 (73.57%), Query Frame = 3 
Query:   15 LIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSKGDE 434
            LI +++  ES VFY KMKGDYYRYLAE    D + +    S K          +E+ PTHPIRLGLALNFSVFYYEILN PE+AC LAK AFDEAIAELD+L+EESYKDSTLIMQLLRDNLTLWTSD   +  EQ +G E
Sbjct:  105 LIANASQPESKVFYLKMKGDYYRYLAEVASGDAKADIVAQSQKAYQDAFDISKTEMQPTHPIRLGLALNFSVFYYEILNCPEKACSLAKAAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQGDEAEQGEGGE 244
The following BLAST results are available for this feature:
BLAST of CX297689 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
1433B_MACFA7.897e-4564.0314-3-3 protein beta/alpha OS=Macaca fascicularis G... [more]
1433B_HUMAN7.897e-4564.0314-3-3 protein beta/alpha OS=Homo sapiens GN=YWHAB... [more]
1433B_BOVIN7.897e-4564.0314-3-3 protein beta/alpha OS=Bos taurus GN=YWHAB P... [more]
143B1_ONCMY2.298e-4463.3114-3-3 protein beta/alpha-1 OS=Oncorhynchus mykiss... [more]
1433T_XENLA2.298e-4465.7114-3-3 protein theta OS=Xenopus laevis GN=ywhaq PE... [more]
1433T_RAT2.298e-4465.7114-3-3 protein theta OS=Rattus norvegicus GN=Ywhaq... [more]
1433T_RABIT2.298e-4465.7114-3-3 protein theta OS=Oryctolagus cuniculus GN=Y... [more]
1433T_MOUSE2.298e-4465.7114-3-3 protein theta OS=Mus musculus GN=Ywhaq PE=1... [more]
1433T_CHICK2.298e-4465.7114-3-3 protein theta OS=Gallus gallus GN=YWHAQ PE=... [more]
1433Z_XENTR3.001e-4465.0014-3-3 protein zeta OS=Xenopus tropicalis GN=ywhaz... [more]

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Properties
Property NameValue
Genbank descriptionC06004B11SK RindPdig24 Citrus clementina cDNA clone C06004B11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX297689 ID=CX297689; Name=CX297689; organism=Citrus clementina; type=EST; length=763bp
GAGGTTGATGAAACCTAATCCCATCCTCCACATCTGGAGAATCAACCGTG
TTTTACTATAAGATGAAAGGAGATTATTACCGTTACCTAGCTGAGTTCAA
AGGTGCTGATGATCGTAAGGAAGCTGCAGATCATTCACTTAAGGCTTACG
AGGCTGCTACAGCTGCAGCAGCCTCAGAGTTACCCCCAACTCATCCAATC
AGACTTGGCCTGGCTCTTAACTTTTCTGTTTTCTACTATGAGATTTTGAA
CTCACCTGAGAGGGCTTGCCACCTGGCTAAACAAGCATTTGATGAGGCGA
TTGCTGAACTTGATAGCCTTAATGAAGAGTCCTACAAGGACAGCACCCTT
ATTATGCAGCTTCTTCGGGATAATCTCACCTTGTGGACCTCGGATCTACC
GGAGGAGGGAGGTGAGCAATCTAAAGGTGATGAAGTTCAAGCAGAGAGCT
AGCCGGGGATGCATGAGCATCAGGAGGAGAAATTGTGCTAGTTGGGTTCT
AATATCTATTAGTATTAGTAGTATAGGGATTGAAAGAACATTTGGCTTGT
ATAATACTTATTACATGTTTTTAATTTCAGGTTGTTGTGCTATTTTCTGT
TTACAAAAAAAAAAGGCCGCTCTTTGTGCTGCAGCTAGAGTATATAAATT
CTGAAAGAGAGTAAGCGACTAAGCGCTATAGAAAAGGACAAAAGAGAGAG
AGGCTGGAGAAATGGCTACTTGCTTGTGGATTCATCCGCATCAGCATCAG
CCTCAGCATCATC
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