CX297691
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX297691 vs. ExPASy Swiss-Prot
Match: AB38G_ARATH (ABC transporter G family member 38 OS=Arabidopsis thaliana GN=ABCG38 PE=2 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.246e-29 Identity = 59/182 (32.42%), Postives = 104/182 (57.14%), Query Frame = 1 Query: 10 LAYAFSQVLIELIYVAFQTVVYVLILYSMMGFAWKAKRFFWFLYMVMMSFMQFTLYGMMIVALTPAPQIGAILSGFFLSLWNLFSGFLIPRVQIPIWWRWYYWLSPVAWTLYGLVTSQVGDIEGNVEIPGSTATMTVKQLLKDSFGFKYDXXXXXXXXXXXXXXXXXXXXTLAITLINFQRR 555 L YAFSQV+IE+ Y Q +Y +I+Y M+G+ W A +FF ++ +S + G+M+++++P +I +IL+G + WN+FSGF IPR ++ +W RW+ ++ P W LYGL +Q GD+E ++ TV + +K+ +G++Y+ ++ ++NFQ+R Sbjct: 1242 LPYAFSQVIIEIPYTMAQACIYGVIVYGMIGYEWTASKFFLNIFFTFISILYSIYTGIMVISVSPNQEIASILNGVISTSWNVFSGFTIPRPRMHVWLRWFTYVCPGWWGLYGLTIAQYGDVETRLD-----TGETVVEFMKNYYGYEYNFLWVVSLTLIAFSMFFVFIYAFSVKILNFQKR 1418
BLAST of CX297691 vs. ExPASy Swiss-Prot
Match: ABCG2_DICDI (ABC transporter G family member 2 OS=Dictyostelium discoideum GN=abcG2 PE=1 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 2.041e-14 Identity = 37/119 (31.09%), Postives = 70/119 (58.82%), Query Frame = 1 Query: 7 YLAYAFSQVLIELIYVAFQTVVYVLILYSMMGFAWKAKRFFWFLYMVMMSFMQFTLYGMMIVALTPAPQIGAILSGFFLSLWNLFSGFLIPRVQIPIWWRWYYWLSPVAWTLYGLVTSQ 363 +L+ FS++ I L+ +TVV+ +++Y M G A++F +FL M + + F + M+ A P + ++++ L+ + LFSGF+ P+ I WW W YW+SP+ + GL++++ Sbjct: 469 FLSLIFSEIPIALL----ETVVFCVLVYWMCGLQANAEKFIYFLLMNFVGDLAFQSFFKMVSAFAPNATLASVIAPAALAPFILFSGFMAPKRSIGGWWIWIYWISPIKYAFEGLMSNE 583 HSP 2 Score: 68.1662 bits (165), Expect = 4.704e-11 Identity = 32/123 (26.02%), Postives = 63/123 (51.22%), Query Frame = 1 Query: 16 YAFSQVLIELIYVAFQTVVYVLILYSMMGFAW--KAKRFFWFLYMVMMSFMQFTLYGMMIVALTPAPQIGAILSGFFLSLWNLFSGFLIPRVQIPIWWRWYYWLSPVAWTLYGLVTSQVGDIE 378 Y F+ ++ +L +V ++Y + +Y + G FF+ ++ ++ F++ M+ + P +I L G LS+ +LF+GF+IP I W W+Y L P + L ++ ++ D+E Sbjct: 1129 YLFTFIVTDLPWVFLSAIIYTVPMYFISGLRLDPNGAPFFYHSFISFTTYFNFSMLAMVFATVLPTDEIAHALGGVALSISSLFAGFMIPPASIAKGWHWFYQLDPTTYPLAIVMINEFQDLE 1251
BLAST of CX297691 vs. ExPASy Swiss-Prot
Match: ABCGG_DICDI (ABC transporter G family member 16 OS=Dictyostelium discoideum GN=abcG16 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.026e-13 Identity = 34/119 (28.57%), Postives = 66/119 (55.46%), Query Frame = 1 Query: 10 LAYAFSQVLIELIYVAFQTVVYVLILYSMMGFAWKAKRFFWFLYMVMMSFMQFTLYGMMIVALTPAPQIGAILSGFFLSLWNLFSGFLIPRVQIPIWWRWYYWLSPVAWTLYGLVTSQV 366 +AY F+ ++ +LI+ +++ I Y ++G A RFF+FL + + M+ +P I + ++ + SL+ L +G+LI R IPI+WRW +++SP W ++++Q+ Sbjct: 587 IAYFFAGLVSDLIWNFIDVIIFCSISYWLIGLNHSADRFFFFLLAIYLLDCLVNRVSKMVSIYSPNAAIASTIAPLYFSLFLLMAGYLIHRNSIPIYWRWMHYISPFKWVFEAILSNQL 705
BLAST of CX297691 vs. ExPASy Swiss-Prot
Match: ABCG6_DICDI (ABC transporter G family member 6 OS=Dictyostelium discoideum GN=abcG6 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.602e-11 Identity = 32/113 (28.32%), Postives = 57/113 (50.44%), Query Frame = 1 Query: 13 AYAFSQVLIELIYVAFQTVVYVLILYSMMGFAWKAKRFFWFLYMVMMSFMQFTLYGMMIVALTPAPQIGAILSGFFLSLWNLFSGFLIPRVQIPIWWRWYYWLSPVAWTLYGL 351 AY S ++ ++ + + I+Y + RF +F+ +++M+ + M A++P +I +++ LS+W LFSGF P+ I WW W Y++SP W GL Sbjct: 560 AYFISSIICDIPAGILEVAFFGPIVYWLANLRPVFIRFVYFMLLLIMTDNLSLSFAKMCAAISPTIEIANVIASVILSIWLLFSGFTAPKNDIGGWWIWLYYISPYTWIFQGL 672 The following BLAST results are available for this feature:
BLAST of CX297691 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX297691 ID=CX297691; Name=CX297691; organism=Citrus clementina; type=EST; length=681bpback to top |