CX297693

Overview
NameCX297693
Unique NameCX297693
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length754
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C93A1_SOYBN (Cytochrome P450 93A1 OS=Glycine max GN=CYP93A1 PE=2 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.089e-38
Identity = 100/258 (38.76%), Postives = 148/258 (57.36%), Query Frame = 1
Query:   22 LRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFGTTLNLISNTIFS-IDLADPTSKT---AREFKQTNWGMMEEAGKPNLSDFFPVLENLDLQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQER--------DFTESKDMLDALLKICEDKSVEI--DINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHPAVPLLL 753
            ++K+C S   S R +D    +R+++ +  ++ V     AG A+      FG  L  +SN I S + L+  TS+    A E K+    + E  GK N+SDF   L+  DLQG  R++     +  D FD ++D  +KQRQE            + KDMLD LL + ED++ EI  D  +IK   + +F AGTDT++ ++EWAM EL+ NPD+L K R E++  +GK   +EESDI  LPYLQA+++ET RLHP  PL++
Sbjct:  127 MKKLCMSELLSGRMMDQFLPVRQQETKRFISRVFRKGVAGEAVD-----FGDELMTLSNNIVSRMTLSQKTSENDNQAEEMKKLVSNIAELMGKFNVSDFIWYLKPFDLQGFNRKIK----ETRDRFDVVVDGIIKQRQEERRKNKETGTAKQFKDMLDVLLDMHEDENAEIKLDKKNIKAFIMDIFVAGTDTSAVSIEWAMAELINNPDVLEKARQEIDAVVGKSRMVEESDIANLPYLQAIVRETLRLHPGGPLVV 375          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C93A2_SOYBN (Cytochrome P450 93A2 OS=Glycine max GN=CYP93A2 PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.331e-36
Identity = 92/256 (35.94%), Postives = 141/256 (55.08%), Query Frame = 1
Query:    4 GDTVENLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFGTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLDLQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERD----FTESKDMLDALLKICEDKSVEIDIN--DIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHPAVPLLL 753
            G +V+ ++K+C S     R LD    +R+++ +  +  V +   AG A+  G      + N+IS    +   +    K A E +     + E  G  N+SDF   L+  DLQG  +R+     +   V DR+I QR ++R+         + KD+LD LL I ED S EI +   +IK   + +F AGTDT+++T+EWAM EL+ NP +L K R E++  +G    IEESDI  LPYLQA+++ET R+HP  PL++
Sbjct:  114 GPSVKFIKKLCMSELLGGRMLDQFLPVRQQETKKFIKRVLQKGIAGEAVDFGGEFMRLSNNIISRMTMN-QTSSEDEKQAEEMRMLVADVAELMGTFNVSDFIWFLKPFDLQGFNKRIRKTRIRFDAVLDRIIKQREEERRNNKEIGGTRQFKDILDVLLDIGEDDSSEIKLTKENIKAFIMDIFVAGTDTSAATMEWAMAELINNPCVLEKARQEIDAVVGNSRIIEESDIVNLPYLQAIVRETLRIHPGGPLIV 368          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C93B1_GLYEC (Licodione synthase OS=Glycyrrhiza echinata GN=CYP93B1 PE=1 SV=2)

HSP 1 Score: 152.14 bits (383), Expect = 2.964e-36
Identity = 94/261 (36.02%), Postives = 142/261 (54.41%), Query Frame = 1
Query:    4 GDTVENLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFGTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLDLQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTESK----------DMLDALLKICEDKSVEIDIN--DIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHPAVPLL 750
            GD    ++K+  +    SR ++  QHLR ++   LL  +    RA  A++I +     T N+IS  I  +  A+      R+       + E  G+ N+SDF  + + +DLQG  +R+   F +   + +R+I +R + R++R     K          D LD LL   ED++ EI I    IK L +  F AGTDTT+ + EWA+ EL++ P +L KVR E++  +GK   +EESD   LPYLQA+LKETFRLHP VP++
Sbjct:  121 GDYWRFIKKLSMNELLGSRSINNFQHLRAQETHQLLRLLSNRARAFEAVNITEELLKLTNNVIS--IMMVGEAEEARDVVRD-------VTEIFGEFNVSDFIWLFKKMDLQGFGKRIEDLFQRFDTLVERIISKREQTRKDRRRNGKKGEQGSGDGIRDFLDILLDCTEDENSEIKIQRVHIKALIMDFFTAGTDTTAISTEWALVELVKKPSVLQKVREEIDNVVGKDRLVEESDCPNLPYLQAILKETFRLHPPVPMV 372          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: F3PH_PETHY (Flavonoid 3'-monooxygenase OS=Petunia hybrida GN=CYP75B2 PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 8.625e-36
Identity = 92/253 (36.36%), Postives = 144/253 (56.92%), Query Frame = 1
Query:   22 LRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTA-IHIGQAAFGTTLNLISNTIFS----IDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLDLQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTESKDMLDALLKICEDKSV----EIDINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHPAVPLLL 753
            LRKIC+ H FS++ LD  +H+R+ +++ L   +     AG   + +GQ     T N ++  +       D +      A EFK     MM  AG  N+ DF P L  LD+QG+  +M     K+   FD  +   L++ + + F E KD+L  L+ +  D +     ++   +IK L L LF AGTDT+SST+EWA+ EL+RNP IL++ + E+++ +G+   + E D+ +L YL+A++KETFRLHP+ PL L
Sbjct:  128 LRKICSVHLFSTKALDDFRHVRQDEVKTLTRALAS---AGQKPVKLGQLLNVCTTNALARVMLGKRVFADGSGDVDPQAAEFKSMVVEMMVVAGVFNIGDFIPQLNWLDIQGVAAKMK----KLHARFDAFLTDILEEHKGKIFGEMKDLLSTLISLKNDDADNDGGKLTDTEIKALLLNLFVAGTDTSSSTVEWAIAELIRNPKILAQAQQEIDKVVGRDRLVGELDLAQLTYLEAIVKETFRLHPSTPLSL 373          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: F3PH_ARATH (Flavonoid 3'-monooxygenase OS=Arabidopsis thaliana GN=CYP75B1 PE=1 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.627e-34
Identity = 96/255 (37.65%), Postives = 146/255 (57.25%), Query Frame = 1
Query:   22 LRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTA-IHIGQAAFGTTLNLISNTIFSIDL--ADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLDLQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTESK-DMLDALLKICEDKSVEIDIN-------DIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHPAVPLLL 753
            LRKI + H FS++ L+  +H+R++++  L    +E  R GT  +++GQ      +N +   +    L  AD   K A EF+     MM  AG  N+ DF P L+ LDLQG+  +M     ++   FD  +   LK+ +     +   DML  L+ +   K  ++D +       +IK L L +F AGTDT++ST++WA+ EL+R+PDI+ K + EL+  +G+  P+ ESDI +LPYLQAV+KE FRLHP  PL L
Sbjct:  128 LRKISSVHLFSAKALEDFKHVRQEEVGTL---TRELVRVGTKPVNLGQLVNMCVVNALGREMIGRRLFGADADHK-ADEFRSMVTEMMALAGVFNIGDFVPSLDWLDLQGVAGKMK----RLHKRFDAFLSSILKEHEMNGQDQKHTDMLSTLISL---KGTDLDGDGGSLTDTEIKALLLNMFTAGTDTSASTVDWAIAELIRHPDIMVKAQEELDIVVGRDRPVNESDIAQLPYLQAVIKENFRLHPPTPLSL 371          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C75A6_CAMME (Flavonoid 3',5'-hydroxylase OS=Campanula medium GN=CYP75A6 PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.349e-33
Identity = 88/259 (33.98%), Postives = 139/259 (53.67%), Query Frame = 1
Query:   22 LRKICNSHAFSSRQLDANQHLRRKKIQDLLA--YVQENCRAGTAIHIGQAAFGTTLNLISNTIFS---------IDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLDLQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQE--RDFTESKDMLDALLKICEDKSVEIDIN--DIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHPAVPLLL 753
            LRK+C+ H    + L+   H++  ++  +L   Y Q +      + + +       N+I   I S         +D +   S +  EF+     +M  AG  N+ DF P +  +DLQGI+R M V   K    FD L+++ +K+  E   D  ++ D LD L+   ++ +  I +N  ++K L L LF AGTDT+SS +EWA+ E+L +  IL++   E++Q IG+   +E+SDI  LPY QA+ KETFR HP+ PL L
Sbjct:  133 LRKLCSLHMLGPKALEDWAHVKVSEVGHMLKEMYEQSSKSVPVPVVVPEMLTYAMANMIGRIILSRRPFVITSKLDSSASASASVSEFQYMVMELMRMAGLFNIGDFIPYIAWMDLQGIQRDMKVIQKK----FDVLLNKMIKEHTESAHDRKDNPDFLDILMAATQENTEGIQLNLVNVKALLLDLFTAGTDTSSSVIEWALAEMLNHRQILNRAHEEMDQVIGRNRRLEQSDIPNLPYFQAICKETFRKHPSTPLNL 387          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C75A1_PETHY (Flavonoid 3',5'-hydroxylase 1 OS=Petunia hybrida GN=CYP75A1 PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 3.068e-33
Identity = 84/245 (34.29%), Postives = 129/245 (52.65%), Query Frame = 1
Query:   22 LRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFGTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLDLQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTESKDMLDALLKICEDKSVE-IDINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHPAVPLLL 753
            LRK+ N H    + L+   ++R  ++  +L  + +  R G  + + +       N+I   + S  +         EFK     +M  AG  N+ DF P L  +DLQGI +RM     K   +  ++ D+      ER      D LD +++  ++   E +   +IK L L LF AGTDT+SS +EWA+ E+++NP IL K + E++Q IG+   + ESDI  LPYL+A+ KETFR HP+ PL L
Sbjct:  128 LRKLSNLHMLGGKALENWANVRANELGHMLKSMSDMSREGQRVVVAEMLTFAMANMIGQVMLSKRVFVDKGVEVNEFKDMVVELMTIAGYFNIGDFIPCLAWMDLQGIEKRMKRLHKKFDALLTKMFDEHKATTYERK--GKPDFLDVVMENGDNSEGERLSTTNIKALLLNLFTAGTDTSSSAIEWALAEMMKNPAILKKAQAEMDQVIGRNRRLLESDIPNLPYLRAICKETFRKHPSTPLNL 370          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C75A4_GENTR (Flavonoid 3',5'-hydroxylase OS=Gentiana triflora GN=CYP75A4 PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.988e-32
Identity = 85/245 (34.69%), Postives = 134/245 (54.69%), Query Frame = 1
Query:   22 LRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFGTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLDLQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTESKDMLDALLKICEDKSVE-IDINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHPAVPLLL 753
            LRK+ N H    + L+    +R+ ++  +L  + E+ +    + I +       N++S  I S  + +     + EFK     +M  AG  N+ DF P +  +DLQGI   M     K   +  RL+D   +  QER   +  D LD ++   ++   E ++ ++IK L L LF AGTDT+SS +EWA+ ELL+N  +L++ + E+++ IG+   + ESDI  LPYLQA+ KETFR HP+ PL L
Sbjct:  136 LRKLSNLHMLGGKALENWADVRKTELGYMLKAMFESSQNNEPVMISEMLTYAMANMLSQVILSRRVFNKKGAKSNEFKDMVVELMTSAGYFNIGDFIPSIGWMDLQGIEGGMKRLHKKFDVLLTRLLDDHKRTSQERK--QKPDFLDFVIANGDNSDGERLNTDNIKALLLNLFTAGTDTSSSIIEWALAELLKNRTLLTRAQDEMDRVIGRDRRLLESDIPNLPYLQAICKETFRKHPSTPLNL 378          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C75A2_SOLME (Flavonoid 3',5'-hydroxylase OS=Solanum melongena GN=CYP75A2 PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.988e-32
Identity = 84/245 (34.29%), Postives = 126/245 (51.43%), Query Frame = 1
Query:   22 LRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFGTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLDLQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTESKDMLDALLKICEDKSVE-IDINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHPAVPLLL 753
            LRK+ N H    + L+   ++R  ++  +L  + +    G  I +         N+I   + S  +     K   EFK     +M  AG  N+ DF P +  +DLQGI + M     K  D+  ++ ++      ER      D LD ++   ++   E + I +IK L L LF AGTDT+SS +EWA+TE+++NP I  K + E++Q IGK     ESDI  LPYL+A+ KE FR HP+ PL L
Sbjct:  131 LRKLSNLHMLGGKALENWANVRANELGHMLKSMFDASHVGERIVVADMLTFAMANMIGQVMLSKRVFVEKGKEVNEFKNMVVELMTVAGYFNIGDFIPQIAWMDLQGIEKGMKKLHKKFDDLLTKMFEEHEATSNERK--GKPDFLDFIMANRDNSEGERLSITNIKALLLNLFTAGTDTSSSVIEWALTEMMKNPTIFKKAQQEMDQIIGKNRRFIESDIPNLPYLRAICKEAFRKHPSTPLNL 373          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C75A3_PETHY (Flavonoid 3',5'-hydroxylase 2 OS=Petunia hybrida GN=CYP75A3 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 5.785e-32
Identity = 84/245 (34.29%), Postives = 127/245 (51.84%), Query Frame = 1
Query:   22 LRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFGTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLDLQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTESKDMLDALLKICEDKSVE-IDINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHPAVPLLL 753
            LRK+ N H    + L+   ++R  ++  +L  + +  R G  + + +       N+I   I S  +         EFK     +M  AG  N+ DF P L  +DLQGI + M     K   +  ++ D+      ER      D LD +++  ++   E +   +IK L L LF AGTDT+SS +EWA+ E+++NP IL K + E++Q IG    + ESDI  LPYL+A+ KETFR HP+ PL L
Sbjct:  128 LRKLSNLHMLGGKALENWANVRANELGHMLKSMFDMSREGERVVVAEMLTFAMANMIGQVILSKRVFVNKGVEVNEFKDMVVELMTTAGYFNIGDFIPCLAWMDLQGIEKGMKRLHKKFDALLTKMFDEHKATSYERK--GKPDFLDCVMENRDNSEGERLSTTNIKALLLNLFTAGTDTSSSAIEWALAEMMKNPAILKKAQGEMDQVIGNNRRLLESDIPNLPYLRAICKETFRKHPSTPLNL 370          
The following BLAST results are available for this feature:
BLAST of CX297693 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 219
Match NameE-valueIdentityDescription
C93A1_SOYBN1.089e-3838.76Cytochrome P450 93A1 OS=Glycine max GN=CYP93A1 PE=... [more]
C93A2_SOYBN1.331e-3635.94Cytochrome P450 93A2 OS=Glycine max GN=CYP93A2 PE=... [more]
C93B1_GLYEC2.964e-3636.02Licodione synthase OS=Glycyrrhiza echinata GN=CYP9... [more]
F3PH_PETHY8.625e-3636.36Flavonoid 3'-monooxygenase OS=Petunia hybrida GN=C... [more]
F3PH_ARATH1.627e-3437.65Flavonoid 3'-monooxygenase OS=Arabidopsis thaliana... [more]
C75A6_CAMME2.349e-3333.98Flavonoid 3',5'-hydroxylase OS=Campanula medium GN... [more]
C75A1_PETHY3.068e-3334.29Flavonoid 3',5'-hydroxylase 1 OS=Petunia hybrida G... [more]
C75A4_GENTR1.988e-3234.69Flavonoid 3',5'-hydroxylase OS=Gentiana triflora G... [more]
C75A2_SOLME1.988e-3234.29Flavonoid 3',5'-hydroxylase OS=Solanum melongena G... [more]
C75A3_PETHY5.785e-3234.29Flavonoid 3',5'-hydroxylase 2 OS=Petunia hybrida G... [more]

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Properties
Property NameValue
Genbank descriptionC06004C03SK RindPdig24 Citrus clementina cDNA clone C06004C03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX297693 ID=CX297693; Name=CX297693; organism=Citrus clementina; type=EST; length=754bp
GAGGGCGACACTGTGGAGAATCTTCGAAAAATATGCAACTCACATGCTTT
CTCTAGTCGCCAACTCGATGCCAATCAGCACCTTCGGCGTAAGAAAATCC
AAGATCTTCTAGCTTATGTCCAAGAAAATTGCCGTGCAGGTACAGCAATA
CATATTGGCCAAGCTGCTTTCGGCACTACGCTTAATTTGATATCCAACAC
AATTTTTTCTATTGACTTGGCTGATCCCACATCAAAAACTGCGCGAGAGT
TTAAGCAAACAAATTGGGGTATGATGGAAGAAGCTGGAAAGCCTAACTTG
TCCGATTTTTTTCCTGTGCTTGAGAATCTTGACTTGCAAGGTATAAGGCG
TCGCATGACAGTTTATTTTGGCAAGATGCTCGATGTATTTGATCGCTTGA
TTGATCAACGATTGAAGCAAAGACAAGAACGAGATTTCACCGAATCCAAA
GATATGTTAGATGCTCTTCTCAAAATTTGTGAAGACAAAAGCGTGGAGAT
TGATATAAATGATATCAAACACTTGTTTCTGGTTTTGTTTGCTGCGGGGA
CTGATACTACTTCGAGTACATTGGAATGGGCAATGACAGAACTACTTCGC
AACCCAGATATTTTATCAAAAGTCCGATTAGAGTTAGAACAAACGATTGG
CAAAGGCAATCCAATTGAGGAATCAGACATCACCCGCTTACCTTATCTAC
AAGCAGTACTCAAAGAAACCTTCAGGTTGCACCCGGCAGTTCCTCTTTTA
CTTC
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