CX297693

Overview
NameCX297693
Unique NameCX297693
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length754
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C99A2_ORYSJ (Cytochrome P450 99A2 OS=Oryza sativa subsp. japonica GN=CYP99A2 PE=2 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 2.787e-18
Identity = 54/154 (35.06%), Postives = 92/154 (59.74%), Query Frame = 1
Query:  304 DFFPVLENLD-LQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTESKDMLDALLKICEDKSVEIDIN--DIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIE-ESDITRLPYLQAVLKETFRLHPAVPLLL 753
            D FP L  +D + G+R R+    G++  VFD++I Q  + + +        +++ LL+I +   +E      +IK + L +F  GT+TTSS  EW M+EL+RNP++++KV+ E+ +     +P + E  I  L Y++ V+KET RL+P +PLL+
Sbjct:  252 DLFPSLRFIDAMTGLRSRLWRARGQLDSVFDKIIAQCEEHQGD-------SLVNVLLRIRDQGDLEFPFGTTNIKAIILDMFTGGTETTSSAAEWVMSELMRNPEVMAKVQAEVRRVFDNKSPQDHEGLIDNLRYMKMVIKETMRLNPVLPLLM 398          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C71B6_ARATH (Cytochrome P450 71B6 OS=Arabidopsis thaliana GN=CYP71B6 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.787e-18
Identity = 68/263 (25.86%), Postives = 132/263 (50.19%), Query Frame = 1
Query:    4 GDTVENLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFGTTLNLISNTIFSIDL--ADPTSKTARE-FKQTNWGMMEEAGKPNLSDFFP----VLENLDLQGIRRRMTVYFGKMLDVFDR--LIDQRLKQRQERDFTESKDMLDALLKICEDK----SVEIDINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHPAVPLLL 753
            GD   ++RK+C    FS ++ ++ +++R +++  L+    ++  +G+++ +         +      F +    +   ++T  E F + N       GK   +D FP    +L+ +      RR +    + LD F +  ++D R K++ E    + +D++D LLK+   +    S  I    I+ + + LF AG DT+  TL+W M EL R+P ++ KV+ E+ + +G    +   D+  L Y++ V+KET+RLH   P+L+
Sbjct:  125 GDYYRDVRKLCVLELFSVKRANSFRNIREEELSRLVNSFSDSASSGSSVDLTANLAKFVASFTCRMAFGLSFQGSGMDNETFLELFTEAN----RVIGKFAAADIFPGFGWILDRISGLDSSRRKSF---QDLDTFYQKAIVDHREKKKTE----DREDLIDVLLKLQSQETKLGSSRITDTHIRAIIMDLFVAGVDTSVITLDWTMAELSRHPRVMKKVQAEIREHVGDKGIVTYDDLEALVYMKMVIKETWRLHAPSPILI 376          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C71AF_ARATH (Cytochrome P450 71A15 OS=Arabidopsis thaliana GN=CYP71A15 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.641e-18
Identity = 64/257 (24.90%), Postives = 128/257 (49.81%), Query Frame = 1
Query:    4 GDTVENLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFGTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLD-LQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTESKDMLDALLKICEDKS--VEIDINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPI----EESDITRLPYLQAVLKETFRLHPAVPLLL 753
            GD    ++ +C  H  + + + +   +R ++   ++  V++     + +++ +     T ++ S   F    ++  S +  +FK     + E  G   +S++ P L  +D ++G+  R      ++  +F  L+D+ +++  +     +KD +D LL         +E+  +DIK + L +F  GT TT+S LEW MTEL+R+P+ + K++ E+    G    +       ++  + YL+AV+KE  RLHP  PLL+
Sbjct:  121 GDYWRQIKTVCVVHLLNKKMVQSFAKVREEERSVMMEKVEKASSDSSPLNLSKLLITLTSDVASRVSFGKKHSNEASMS--DFKNQVRKITELVGGFPVSEYIPCLAWIDQIRGLYNRAE----EVSKIFGDLMDKVVQEHLDATNKPTKDFVDILLSFERQSKDGIEVRRSDIKFIILDIFLGGTTTTNSLLEWTMTELIRHPECMKKLQDEIR---GDATNLTIYRSHEEVEDMKYLKAVIKEGLRLHPPFPLLV 368          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C99A1_SORBI (Cytochrome P450 CYP99A1 (Fragment) OS=Sorghum bicolor GN=CYP99A1 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 6.210e-18
Identity = 56/157 (35.67%), Postives = 87/157 (55.41%), Query Frame = 1
Query:  304 DFFPVLENLDL-QGIRRRMTVYFGKMLDVFDRLIDQ-RLKQRQERDFTESKDMLDALLKICED----KSVEIDINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTI-GKGNPIEESDITRLPYLQAVLKETFRLHPAVPLLL 753
            D FP L  +D+  G+ RR+     ++  +FDR++ +   +QRQE   T     L  LL+I +D    ++  I    IK +   + A GT+TTSS  EW M+EL+R P+ ++K + E+   + GK     E  + +L Y + V+KE  RLHP +PLLL
Sbjct:  220 DLFPSLWFVDVVTGLTRRLWTARRRLDAIFDRILAECEARQRQEEKMTGDDGFLGVLLRIRDDDGEPETGGISTTSIKAILFDMLAGGTETTSSAAEWIMSELMRKPEAMAKAQAEVRGALDGKSPEDHEGQMDKLSYTRMVVKEGLRLHPVLPLLL 376          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C98A1_SORBI (Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 6.210e-18
Identity = 74/262 (28.24%), Postives = 122/262 (46.56%), Query Frame = 1
Query:   22 LRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAI-----------HIGQAAFGTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFF-------PVLENLDLQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTESKDMLDALLKICEDKSVEIDINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHPAVPLLL 753
            +RK+CN   F+ ++L+A + +R  ++    A V+   RA TA            H+   AF     L     F     D   +  REFK      ++     ++++F        P+ E L      RR  +          ++I++  K  +E      +  +DAL  + +   +  D   +  L   +  AG DTT  ++EWAM EL+RNP +  K++ EL++ +G+   + E+D   LPYLQAV+KE+ RLHP  PL+L
Sbjct:  126 VRKLCNLELFTPKRLEALRPIREDEVT---AMVESVYRAATAPGNEGKPMVVRNHLSMVAFNNITRLAFGKRFMNANGD-IDEQGREFKTIVNNGIKIGASLSVAEFIWYLRWLCPLNEELYKTHNERRDRLTM--------KIIEEHAKSLKESG--AKQHFVDALFTLKQQYDLSEDT--VIGLLWDMITAGMDTTVISVEWAMAELVRNPRVQKKLQEELDRVVGRDRVMLETDFQNLPYLQAVVKESLRLHPPTPLML 371          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C79A1_SORBI (Tyrosine N-monooxygenase OS=Sorghum bicolor GN=CYP79A1 PE=1 SV=3)

HSP 1 Score: 91.2781 bits (225), Expect = 6.210e-18
Identity = 47/150 (31.33%), Postives = 86/150 (57.33%), Query Frame = 1
Query:  298 LSDFFPVLENLDLQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTESKDMLDALLKICEDKSVEI-DINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHPAVP 744
            +SD+ P L  LDL G  + +      +  + D +ID R +Q +  +  E +D LD L+ + + +   +  I ++K     +  A  D  S+ +EWA+ E++ NP++++K   EL++ +G+   ++ESDI +L Y++A ++E FRLHP  P
Sbjct:  268 VSDYLPWLRGLDLDGHEKIVKEANVAVNRLHDTVIDDRWRQWKSGERQEMEDFLDVLITLKDAQGNPLLTIEEVKAQSQDITFAAVDNPSNAVEWALAEMVNNPEVMAKAMEELDRVVGRERLVQESDIPKLNYVKACIREAFRLHPVAP 417          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C71A6_NEPRA (Cytochrome P450 71A6 (Fragment) OS=Nepeta racemosa GN=CYP71A6 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 8.110e-18
Identity = 58/165 (35.15%), Postives = 91/165 (55.15%), Query Frame = 1
Query:  298 LSDFFPVLE-NLDLQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTESK---------DMLDALLKIC---EDKSVEIDINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHPAVPLLL 753
            L ++ P LE      G+ RR+     ++   FD  + + +++ + RD  E           D +D LL+     E  S  +D   IK + L +F AGTDTT + LEWA++EL++NP  +  ++ E+    G    IEESD+ ++PYL+AV+KE+ RLH  VPLL+
Sbjct:  220 LWEYIPWLEWTRRFDGVDRRIE----EVSRTFDEFLGKVIQEHRVRDKREDTTVVGDTVGLDFVDLLLQFQRENERSSSPVDDLTIKAVILDMFLAGTDTTVTALEWALSELIKNPRAMKILQKEVRGVAGSKGEIEESDLEKMPYLKAVMKESLRLHAPVPLLV 380          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C71AO_ARATH (Cytochrome P450 71A24 OS=Arabidopsis thaliana GN=CYP71A24 PE=2 SV=3)

HSP 1 Score: 90.5077 bits (223), Expect = 1.059e-17
Identity = 68/253 (26.88%), Postives = 130/253 (51.38%), Query Frame = 1
Query:    4 GDTVENLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFGTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLD-LQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTESKDMLDALLKICEDKSV--EIDINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHPAVPLLL 753
            G+    ++ +C  H FS++ + + + +R+++I  ++    E  R  +++ I  +     +NL +N I  + L         +FK     +    G+ ++  +   L  +D ++G+  ++     K+ +  D  +++ ++   + D     D +D LL I  +KSV  EID   IK + L +F    DTT + LEWAMTELL + + L +++ E+       + + E D+  + YL+AV+KET RLHP +PL++
Sbjct:  122 GEYWRQMKSVCVLHLFSNKMVRSFRDVRQEEISLMI----EKIRISSSLRINLSEI--LVNLTNNVICRVALGRKYGGKT-DFKDLMKRLTRLLGEFSVGSYVSWLAWIDWIRGLDGQLI----KISNDLDEFLERVVQDHVDGD-GHKNDFVDFLLTIEREKSVGFEIDRLSIKAIILDVFVGDMDTTYTLLEWAMTELLCHHECLDRLQEEVRMVCKDKSGVSEDDLQDMKYLKAVIKETLRLHPPLPLMV 362          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C71A4_SOLME (Cytochrome P450 71A4 OS=Solanum melongena GN=CYP71A4 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.059e-17
Identity = 60/250 (24.00%), Postives = 130/250 (52.00%), Query Frame = 1
Query:   22 LRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFGTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLD-LQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFT---ESKDMLDALLKICEDKSVEIDI--NDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHPAVPLLL 753
            +R I   H  S++++ + + +R ++  +++  +++ C A + I++G+     T N+ S    ++       ++  + K      ++     N+ D+ P L+ ++ + G+  ++     K+    D +I++ + + ++ ++    E+KD +D LL+I   K  +  +  + +K + L  FAAGTDT  + L+W M ++LR P  +  ++ E+       + I E D+  + YL+AV+KE+ RLHP   LL+
Sbjct:  131 VRSIVVLHLLSNKRVQSYRDVREEETANMIEKIRQGCDA-SVINLGEHLCFLTNNITSRV--ALGRTYDERESGIDAKDILEQFLQLLDTFNVGDYIPWLKWVNKITGLDTKVEKIAKKLDTFLDSVIEEHIIRNKKEEYAITDEAKDFVDVLLEIQNGKETDFPLQRDSLKAILLDAFAAGTDTIYTNLDWTMADVLRQPRAMKTLQNEVRGLAQGKSEITEDDLKNMQYLRAVIKESLRLHPPNSLLV 377          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: TCMO_MEDSA (Trans-cinnamate 4-monooxygenase OS=Medicago sativa GN=CYP73A3 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.383e-17
Identity = 56/156 (35.90%), Postives = 88/156 (56.41%), Query Frame = 1
Query:  295 NLSDFFPVLENLDLQGIRRRMTVYFGKMLDVF-DRLIDQRLKQRQERDFTESKDMLDALLKICEDKSVEIDINDIKHLFLV--LFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHPAVPLLL 753
            N  DF P+L    L+G  +       + L +F D  +D+R K    +  T S D L   +    D   + +IND   L++V  +  A  +TT  ++EW + EL+ + DI +KVR E+++ +G G+ + E D+ +LPYLQAV+KET RL  A+PLL+
Sbjct:  223 NYGDFIPILRPF-LKGYLKVCKEVKDRRLQLFKDYFVDERKKLESTKS-TTSNDGLKCAIDHILDAQKKGEINDDNVLYIVENINVAAIETTLWSIEWGIAELVNHQDIQNKVREEMDRVLGPGHQVTEPDLHKLPYLQAVIKETLRLRMAIPLLV 376          
The following BLAST results are available for this feature:
BLAST of CX297693 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 219
Match NameE-valueIdentityDescription
C99A2_ORYSJ2.787e-1835.06Cytochrome P450 99A2 OS=Oryza sativa subsp. japoni... [more]
C71B6_ARATH2.787e-1825.86Cytochrome P450 71B6 OS=Arabidopsis thaliana GN=CY... [more]
C71AF_ARATH3.641e-1824.90Cytochrome P450 71A15 OS=Arabidopsis thaliana GN=C... [more]
C99A1_SORBI6.210e-1835.67Cytochrome P450 CYP99A1 (Fragment) OS=Sorghum bico... [more]
C98A1_SORBI6.210e-1828.24Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1... [more]
C79A1_SORBI6.210e-1831.33Tyrosine N-monooxygenase OS=Sorghum bicolor GN=CYP... [more]
C71A6_NEPRA8.110e-1835.15Cytochrome P450 71A6 (Fragment) OS=Nepeta racemosa... [more]
C71AO_ARATH1.059e-1726.88Cytochrome P450 71A24 OS=Arabidopsis thaliana GN=C... [more]
C71A4_SOLME1.059e-1724.00Cytochrome P450 71A4 OS=Solanum melongena GN=CYP71... [more]
TCMO_MEDSA1.383e-1735.90Trans-cinnamate 4-monooxygenase OS=Medicago sativa... [more]

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Properties
Property NameValue
Genbank descriptionC06004C03SK RindPdig24 Citrus clementina cDNA clone C06004C03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX297693 ID=CX297693; Name=CX297693; organism=Citrus clementina; type=EST; length=754bp
GAGGGCGACACTGTGGAGAATCTTCGAAAAATATGCAACTCACATGCTTT
CTCTAGTCGCCAACTCGATGCCAATCAGCACCTTCGGCGTAAGAAAATCC
AAGATCTTCTAGCTTATGTCCAAGAAAATTGCCGTGCAGGTACAGCAATA
CATATTGGCCAAGCTGCTTTCGGCACTACGCTTAATTTGATATCCAACAC
AATTTTTTCTATTGACTTGGCTGATCCCACATCAAAAACTGCGCGAGAGT
TTAAGCAAACAAATTGGGGTATGATGGAAGAAGCTGGAAAGCCTAACTTG
TCCGATTTTTTTCCTGTGCTTGAGAATCTTGACTTGCAAGGTATAAGGCG
TCGCATGACAGTTTATTTTGGCAAGATGCTCGATGTATTTGATCGCTTGA
TTGATCAACGATTGAAGCAAAGACAAGAACGAGATTTCACCGAATCCAAA
GATATGTTAGATGCTCTTCTCAAAATTTGTGAAGACAAAAGCGTGGAGAT
TGATATAAATGATATCAAACACTTGTTTCTGGTTTTGTTTGCTGCGGGGA
CTGATACTACTTCGAGTACATTGGAATGGGCAATGACAGAACTACTTCGC
AACCCAGATATTTTATCAAAAGTCCGATTAGAGTTAGAACAAACGATTGG
CAAAGGCAATCCAATTGAGGAATCAGACATCACCCGCTTACCTTATCTAC
AAGCAGTACTCAAAGAAACCTTCAGGTTGCACCCGGCAGTTCCTCTTTTA
CTTC
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