CX297693

Overview
NameCX297693
Unique NameCX297693
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length754
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: TCMO_ZINEL (Trans-cinnamate 4-monooxygenase OS=Zinnia elegans GN=CYP73A12 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.812e-16
Identity = 55/156 (35.26%), Postives = 89/156 (57.05%), Query Frame = 1
Query:  295 NLSDFFPVLENLDLQGIRRRMTVYFGKMLDVF-DRLIDQRLK--QRQERDFTESKDMLDALLKICEDKSVEIDINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHPAVPLLL 753
            N  DF P+L    L+G  +       K   +F D  +D+R K    +  D  + K  +D +L   +DK  EI+ +++ ++   +  A  +TT  ++EWA+ EL+ +P+I +K+R EL   +G G  + E D+ +LPYLQAV+KET RL  A+PLL+
Sbjct:  223 NYGDFIPILRPF-LKGYLKLCKEVKEKRFQLFKDYFVDERKKLGSTKSMDNNQLKCAIDHILD-AKDKG-EINEDNVLYIVENINVAAIETTLWSIEWAIAELVNHPEIQAKLRHELVSQLGPGVQVTEPDLHKLPYLQAVIKETLRLRMAIPLLV 375          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: TCMO_CICAR (Trans-cinnamate 4-monooxygenase OS=Cicer arietinum GN=CYP73A19 PE=2 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 5.812e-16
Identity = 55/158 (34.81%), Postives = 88/158 (55.70%), Query Frame = 1
Query:  295 NLSDFFPVLENLDLQGIRRRMTVYFGKMLDVF-DRLIDQRLKQRQERDFTES--KDMLDALLKICEDKSVEIDINDIKHLFLV--LFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHPAVPLLL 753
            N  DF P+L    L+G  +       + L +F D  +D+R K    +  T    K  +D +L    D   + +IND   L++V  +  A  +TT  ++EW + EL+ +  I +KVR E+++ +G G+ + E D+ +LPYLQAV+KET RL  A+PLL+
Sbjct:  222 NYGDFIPILRPF-LKGYLKLCKEVKDRRLQLFKDYFVDERKKLGSTKSTTNEGLKCAIDHIL----DAQQKGEINDDNVLYIVENINVAAIETTLWSIEWGIAELVNHQKIQNKVREEIDRVLGPGHQVTEPDLQKLPYLQAVIKETLRLRMAIPLLV 374          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: TCMO_SOYBN (Trans-cinnamate 4-monooxygenase OS=Glycine max GN=CYP73A11 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 7.591e-16
Identity = 50/155 (32.26%), Postives = 88/155 (56.77%), Query Frame = 1
Query:  295 NLSDFFPVLENLDLQGIRRRMTVYFGKMLDVF-DRLIDQRLKQRQERDFTESKDMLDALLKICE-DKSVEIDINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHPAVPLLL 753
            N  DF P+L    L+G  +         L +F D  +D+R K    +    + ++  A+  I +  +  EI+ +++ ++   +  A  +TT  ++EW + EL+ +P+I  K+R E+++ +G G+ + E DI +LPYLQAV+KET RL  A+PLL+
Sbjct:  223 NYGDFIPILRPF-LKGYLKICKEVKETRLKLFKDYFVDERKKLGSTKSTNNNNELKCAIDHILDAQRKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQQKLRDEIDRVLGAGHQVTEPDIQKLPYLQAVVKETLRLRMAIPLLV 376          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: CP17A_CHICK (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Gallus gallus GN=CYP17A1 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.295e-15
Identity = 60/189 (31.75%), Postives = 101/189 (53.44%), Query Frame = 1
Query:  223 DPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLE---NLDLQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTES-KDMLDALLKI---CEDKSV---EIDINDIKHLFLV--LFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHPAVPLLL 753
            DP  +   E+ Q   G+++   K +L D FP L+   N DL  ++R         L V D+L+ Q+  + +E    ++ +D++DALL++    E+ S     +++ D   L  V  +F AG +TT++ L+WA+  LL  P++  K++ E++Q IG       SD   LPYL+A + E  R+ P  PLL+
Sbjct:  197 DPEFEAMLEYSQ---GIVDTVAKESLVDIFPWLQIFPNRDLALLKR--------CLKVRDQLLQQKFTEHKEAFCGDTVRDLMDALLQVRLNAENNSPLEPGLELTDDHLLMTVGDIFGAGVETTTTVLKWAVLYLLHYPEVQKKIQEEMDQKIGLARHPHLSDRPLLPYLEATISEGLRIRPVSPLLI 374          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C71BF_ARATH (Cytochrome P450 71B15 OS=Arabidopsis thaliana GN=CYP71B15 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.295e-15
Identity = 68/255 (26.67%), Postives = 121/255 (47.45%), Query Frame = 1
Query:    4 GDTVENLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFGTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFP--VLENLD-LQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTESKDMLDALLKICED-KSVEIDINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIG-KGNPIEESDITRLPYLQAVLKETFRLHPAVPLLL 753
            GD    +RK+     FS ++L + +++  ++    +  + E     + +++ +A F    N++    + I+L +     A               +   SDFFP  +   +D + G  RR+   F  +   F  ++++ LK  +E   T    M+D   K   D  +++   + +K +   +F AG    +    W MTEL+RNP ++ KV+ E+  T+G K   I+E D+ +L Y + V+KET RLHP  PLLL
Sbjct:  117 GDEWSLMRKLSVVELFSVKKLQSFKYIIEEENNLCVKKLSEFATRQSPVNLERAIFTLVGNIVCRIGYGINLYECDFFEADRVVDLVLKAEAVIRETVFSDFFPGRIGRFIDCISGQNRRLKNNFSVVDTFFQNVLNEHLKPGRESS-TIVDLMIDMKKKQENDGDALKFTTDHLKGMISDIFVAGIGGVAGITLWGMTELIRNPRVMKKVQDEIRTTLGDKKERIKEEDLNQLHYFKLVVKETLRLHPTTPLLL 370          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: TCMO_HELTU (Trans-cinnamate 4-monooxygenase OS=Helianthus tuberosus GN=CYP73A1 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.691e-15
Identity = 53/156 (33.97%), Postives = 88/156 (56.41%), Query Frame = 1
Query:  295 NLSDFFPVLENLDLQGIRRRMTVYFGKMLDVF-DRLIDQRLK--QRQERDFTESKDMLDALLKICEDKSVEIDINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHPAVPLLL 753
            N  DF P+L    L+   +       K + +F D  +D+R K    ++ D  + K  +D +L+  E    EI+ +++ ++   +  A  +TT  ++EW + EL+ +P+I +K+R EL+  +G G  I E D+  LPYLQAV+KET RL  A+PLL+
Sbjct:  223 NYGDFIPILRPF-LRNYLKLCKEVKDKRIQLFKDYFVDERKKIGSTKKMDNNQLKCAIDHILEAKEKG--EINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQAKLRHELDTKLGPGVQITEPDVQNLPYLQAVVKETLRLRMAIPLLV 375          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: TCMO_PHAAU (Trans-cinnamate 4-monooxygenase OS=Phaseolus aureus GN=CYP73A2 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.209e-15
Identity = 53/155 (34.19%), Postives = 89/155 (57.42%), Query Frame = 1
Query:  295 NLSDFFPVLENLDLQGIRRRMTVYFGKMLDVF-DRLIDQRLKQRQERDFTESKDMLDALLKICE-DKSVEIDINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHPAVPLLL 753
            N  DF P+L    L+G  +         L +F D  +D+R K       T ++ +  A+  I + +K  EI+ +++ ++   +  A  +TT  ++EW + EL+ +P+I  KVR E+++ +G G+ + E DI +LPYLQAV+KET RL  A+PLL+
Sbjct:  223 NYGDFIPILRPF-LKGYLKICKEVKETRLKLFKDYFVDER-KNIGSTKSTNNEGLKCAIDHILDAEKKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQQKVRDEIDRVLGVGHQVTEPDIQKLPYLQAVVKETLRLRMAIPLLV 375          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: TCMO_ARATH (Trans-cinnamate 4-monooxygenase OS=Arabidopsis thaliana GN=CYP73A5 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.885e-15
Identity = 51/154 (33.12%), Postives = 86/154 (55.84%), Query Frame = 1
Query:  295 NLSDFFPVLENLDLQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTESKDMLDALLKICE-DKSVEIDINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHPAVPLLL 753
            N  DF P+L    L+G  +       + + +F +      KQ      T S+ +  A+  I E ++  EI+ +++ ++   +  A  +TT  ++EW + EL+ +P+I SK+R EL+  +G G  + E D+ +LPYLQAV+KET RL  A+PLL+
Sbjct:  223 NYGDFIPILRPF-LRGYLKICQDVKDRRIALFKKYFVDERKQIASSKPTGSEGLKCAIDHILEAEQKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQSKLRNELDTVLGPGVQVTEPDLHKLPYLQAVVKETLRLRMAIPLLV 375          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: TCMO_PEA (Trans-cinnamate 4-monooxygenase OS=Pisum sativum GN=CYP73A9 PE=2 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 3.767e-15
Identity = 54/158 (34.18%), Postives = 90/158 (56.96%), Query Frame = 1
Query:  295 NLSDFFPVLENLDLQGIRRRMTVYFGKMLDVF-DRLIDQRLKQRQERD-FTES-KDMLDALLKICEDKSVEIDINDIKHLFLV--LFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHPAVPLLL 753
            N  DF P+L    L+G  +       + L +F D  +D+R K    +  + E  K  +D +L    D   + +IND   L++V  +  A  +TT  ++EW + EL+ + +I +K+R E+++ +G G+ + E D+ +LPYLQAV+KET RL  A+PLL+
Sbjct:  223 NYGDFIPILRPF-LKGYLKVCKEVKDRRLQLFKDYFVDERKKLGSTKSTYNEGLKCAIDHIL----DAQKKGEINDDNVLYIVENINVAAIETTLWSIEWGIAELVNHQEIQNKLREEMDKVLGPGHQVTEPDLEKLPYLQAVIKETLRLRMAIPLLV 375          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: TCMO_POPKI (Trans-cinnamate 4-monooxygenase OS=Populus kitakamiensis GN=CYP73A16 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.920e-15
Identity = 52/156 (33.33%), Postives = 86/156 (55.13%), Query Frame = 1
Query:  295 NLSDFFPVLENLDLQGIRRRMTVYFGKMLDVF-DRLIDQRLKQRQERDFTES--KDMLDALLKICEDKSVEIDINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHPAVPLLL 753
            N  DF P+L    L+G  +       + L +F D  +D+R K    ++ +    K  +D +L     K  EI+ +++ ++   +  A  +TT  ++EW + EL+ +P+I  K+R EL+  +G G+ I E D  +LPYL AV+KET RL  A+PLL+
Sbjct:  223 NYGDFIPILRPF-LRGYLKICQEVKERRLQLFKDYFVDERKKLASTKNMSNEGLKCAIDHILDA--QKKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRHELDTLLGPGHQITEPDTYKLPYLNAVVKETLRLRMAIPLLV 375          
The following BLAST results are available for this feature:
BLAST of CX297693 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 219
Match NameE-valueIdentityDescription
TCMO_ZINEL5.812e-1635.26Trans-cinnamate 4-monooxygenase OS=Zinnia elegans ... [more]
TCMO_CICAR5.812e-1634.81Trans-cinnamate 4-monooxygenase OS=Cicer arietinum... [more]
TCMO_SOYBN7.591e-1632.26Trans-cinnamate 4-monooxygenase OS=Glycine max GN=... [more]
CP17A_CHICK1.295e-1531.75Steroid 17-alpha-hydroxylase/17,20 lyase OS=Gallus... [more]
C71BF_ARATH1.295e-1526.67Cytochrome P450 71B15 OS=Arabidopsis thaliana GN=C... [more]
TCMO_HELTU1.691e-1533.97Trans-cinnamate 4-monooxygenase OS=Helianthus tube... [more]
TCMO_PHAAU2.209e-1534.19Trans-cinnamate 4-monooxygenase OS=Phaseolus aureu... [more]
TCMO_ARATH2.885e-1533.12Trans-cinnamate 4-monooxygenase OS=Arabidopsis tha... [more]
TCMO_PEA3.767e-1534.18Trans-cinnamate 4-monooxygenase OS=Pisum sativum G... [more]
TCMO_POPKI4.920e-1533.33Trans-cinnamate 4-monooxygenase OS=Populus kitakam... [more]

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Properties
Property NameValue
Genbank descriptionC06004C03SK RindPdig24 Citrus clementina cDNA clone C06004C03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX297693 ID=CX297693; Name=CX297693; organism=Citrus clementina; type=EST; length=754bp
GAGGGCGACACTGTGGAGAATCTTCGAAAAATATGCAACTCACATGCTTT
CTCTAGTCGCCAACTCGATGCCAATCAGCACCTTCGGCGTAAGAAAATCC
AAGATCTTCTAGCTTATGTCCAAGAAAATTGCCGTGCAGGTACAGCAATA
CATATTGGCCAAGCTGCTTTCGGCACTACGCTTAATTTGATATCCAACAC
AATTTTTTCTATTGACTTGGCTGATCCCACATCAAAAACTGCGCGAGAGT
TTAAGCAAACAAATTGGGGTATGATGGAAGAAGCTGGAAAGCCTAACTTG
TCCGATTTTTTTCCTGTGCTTGAGAATCTTGACTTGCAAGGTATAAGGCG
TCGCATGACAGTTTATTTTGGCAAGATGCTCGATGTATTTGATCGCTTGA
TTGATCAACGATTGAAGCAAAGACAAGAACGAGATTTCACCGAATCCAAA
GATATGTTAGATGCTCTTCTCAAAATTTGTGAAGACAAAAGCGTGGAGAT
TGATATAAATGATATCAAACACTTGTTTCTGGTTTTGTTTGCTGCGGGGA
CTGATACTACTTCGAGTACATTGGAATGGGCAATGACAGAACTACTTCGC
AACCCAGATATTTTATCAAAAGTCCGATTAGAGTTAGAACAAACGATTGG
CAAAGGCAATCCAATTGAGGAATCAGACATCACCCGCTTACCTTATCTAC
AAGCAGTACTCAAAGAAACCTTCAGGTTGCACCCGGCAGTTCCTCTTTTA
CTTC
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