CX297693

Overview
NameCX297693
Unique NameCX297693
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length754
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C75A7_EUSGR (Flavonoid 3',5'-hydroxylase OS=Eustoma grandiflorum GN=CYP75A7 PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 9.868e-32
Identity = 83/245 (33.88%), Postives = 131/245 (53.47%), Query Frame = 1
Query:   22 LRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFGTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLDLQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTESKDMLDALLKICEDKSVE-IDINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHPAVPLLL 753
            LRK+ N H    + L   + +R+K++  +L  + E+ R G  + + +       N++   + S  +       + EFK     +M  AG  N+ DF P +  +DLQGI+  M     K   +  RL+++      ER    S D LD ++   ++   E +   +IK L L +F AGTDT+SS +EWA+ ELL+NP IL + + E++  IG+     E+DI++LPYLQA+ KE FR HP+ PL L
Sbjct:  132 LRKLSNIHILGGKALQGWEEVRKKELGYMLYAMAESGRHGQPVVVSEMLTYAMANMLGQVMLSKRVFGSQGSESNEFKDMVVELMTVAGYFNIGDFIPSIAWMDLQGIQGGMKRLHKKFDALLTRLLEEHTASAHERK--GSPDFLDFVVANGDNSEGERLQTVNIKALLLNMFTAGTDTSSSVIEWALAELLKNPIILRRAQEEMDGVIGRDRRFLEADISKLPYLQAICKEAFRKHPSTPLNL 374          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C75A5_EUSGR (Flavonoid 3',5'-hydroxylase OS=Eustoma grandiflorum GN=CYP75A5 PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 9.868e-32
Identity = 83/245 (33.88%), Postives = 131/245 (53.47%), Query Frame = 1
Query:   22 LRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFGTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLDLQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTESKDMLDALLKICEDKSVE-IDINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHPAVPLLL 753
            LRK+ N H    + L   + +R+K++  +L  + E+ R G  + + +       N++   + S  +       + EFK     +M  AG  N+ DF P +  +DLQGI+  M     K   +  RL+++      ER    S D LD ++   ++   E +   +IK L L +F AGTDT+SS +EWA+ ELL+NP IL + + E++  IG+     E+DI++LPYLQA+ KE FR HP+ PL L
Sbjct:  132 LRKLSNIHILGGKALQGWEEVRKKELGYMLYAMAESGRHGQPVVVSEMLTYAMANMLGQVMLSKRVFGSQGSESNEFKDMVVELMTVAGYFNIGDFIPSIAWMDLQGIQGGMKRLHKKFDALLTRLLEEHTASAHERK--GSPDFLDFVVANRDNSEGERLHTVNIKALLLNMFTAGTDTSSSVIEWALAELLKNPIILKRAQEEMDGVIGRDRRFLEADISKLPYLQAICKEAFRKHPSTPLNL 374          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C80A1_BERST (Berbamunine synthase OS=Berberis stolonifera GN=CYP80A1 PE=1 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.198e-31
Identity = 74/244 (30.33%), Postives = 142/244 (58.20%), Query Frame = 1
Query:   25 RKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFGTTLNLISNTIFSIDLADPTSKTARE-FKQTNWGMMEEAGKPNLSDFFPVLENLDLQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTESKDMLDALLKICEDKSVEIDINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHPAVPLLL 753
            RKI ++  FS + L A +  R +   +L+ ++    + G  + +    FG  LN++ + +FS D+ + + ++      +   GM+   G  +++ +FPVL   DL G++R+M   F  ++ +++  +   L +R  R+  E KDMLD L+      + + + + I  +F+  F  G+DT S+ +EWA+ +L++NPD L+K+R EL++ +G+ + ++ES  + LPYLQA +KET RL+P + +++
Sbjct:  128 RKILHTEIFSQKMLQAQEKNRERVAGNLVNFIMT--KVGDVVELRSWLFGCALNVLGHVVFSKDVFEYSDQSDEVGMDKLIHGMLMTGGDFDVASYFPVLARFDLHGLKRKMDEQFKLLIKIWEGEV---LARRANRN-PEPKDMLDVLI------ANDFNEHQINAMFMETFGPGSDTNSNIIEWALAQLIKNPDKLAKLREELDRVVGRSSTVKESHFSELPYLQACVKETMRLYPPISIMI 359          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C71A1_PERAE (Cytochrome P450 71A1 OS=Persea americana GN=CYP71A1 PE=1 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.425e-30
Identity = 76/255 (29.80%), Postives = 140/255 (54.90%), Query Frame = 1
Query:    4 GDTVENLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFGTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLD-LQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQER--DFTESKDMLDALLKICEDKS--VEIDINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHPAVPLLL 753
            G+    +RKIC     S +++++ + +R +++  ++  + ++C  G A+++ +     +   I+   F     +   +   +F      +    G   + D+FP    +D L G+  R+    G++    D +ID  L  R+    D  E KD++D LL + +D S  V ++ N++K + L +F+ GTDTT+ TLEWAM EL+++PD++ K + E+ + +GK   +EE D+ +L YL+ ++KET RLHP  PLL+
Sbjct:  120 GEYWRQVRKICVLELLSIKRVNSYRSIREEEVGLMMERISQSCSTGEAVNLSELLLLLSSGTITRVAFGKKY-EGEEERKNKFADLATELTTLMGAFFVGDYFPSFAWVDVLTGMDARLKRNHGELDAFVDHVIDDHLLSRKANGSDGVEQKDLVDVLLHLQKDSSLGVHLNRNNLKAVILDMFSGGTDTTAVTLEWAMAELIKHPDVMEKAQQEVRRVVGKKAKVEEEDLHQLHYLKLIIKETLRLHPVAPLLV 373          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C75A1_PINTA (Cytochrome P450 750A1 OS=Pinus taeda GN=CYP750A1 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.275e-28
Identity = 73/259 (28.19%), Postives = 142/259 (54.83%), Query Frame = 1
Query:    4 GDTVENLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGT-AIHIGQAAFGTTLNLISNTIFSIDLAD-PTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLDLQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTES-----KDMLDALLKICEDKSVEIDIND--IKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHPAVPLLL 753
            GD    +RKIC     +S+++++ +H+R++++  ++  + E   +G  A+++ +A   +  N++   +     +D       + F      +    G  N+ DF P L+ LDLQGI+R +     +     +++ID+ +     R+         KD++D LL++ ++ +    +    IK +   LF+AG +T+++ LEWAM+ELLR+P  + K++ E+E  +G+   ++ESD+  + YL  V+KET RL+P++PL L
Sbjct:  131 GDHWRKMRKICVLELLTSKRIESFKHVRQEELSAMIHSIWEESESGRIAVNVSKAISTSLANILWRILARKKFSDNDLGADGKGFADLVVEVSIAVGSLNIGDFIPYLDCLDLQGIKRALKKANARFDAFAEKMIDEHINASTIRNGEADAGCHVKDIIDVLLEMAKNDNTGAKVTREIIKAITYELFSAGMETSANVLEWAMSELLRHPHAMKKLQQEIESVVGQQGTVKESDLASIVYLHCVVKETLRLYPSLPLAL 389          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C84A1_ARATH (Cytochrome P450 84A1 OS=Arabidopsis thaliana GN=CYP84A1 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.881e-28
Identity = 77/261 (29.50%), Postives = 136/261 (52.11%), Query Frame = 1
Query:   22 LRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFGTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLDLQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTES-----KDMLDALLKICEDK------------SVEIDINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHPAVPLLL 753
            +RK+C    FS ++ ++   +R  ++  ++  V  +C  G  I++G+  F  T N+     F         K   EF +      +  G  N++DF P    +D QGI +R+      +    D +ID+ +K+++ ++  +       DM+D LL    ++            S+++  ++IK + + +   GT+T +S +EWA+TELLR+P+ L +V+ EL + +G    +EESDI +L YL+  LKET R+HP +PLLL
Sbjct:  135 MRKVCVMKVFSRKRAESWASVR-DEVDKMVRSV--SCNVGKPINVGEQIFALTRNITYRAAFG----SACEKGQDEFIRILQEFSKLFGAFNVADFIPYFGWIDPQGINKRLVKARNDLDGFIDDIIDEHMKKKENQNAVDDGDVVDTDMVDDLLAFYSEEAKLVSETADLQNSIKLTRDNIKAIIMDVMFGGTETVASAIEWALTELLRSPEDLKRVQQELAEVVGLDRRVEESDIEKLTYLKCTLKETLRMHPPIPLLL 388          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C81F1_ARATH (Cytochrome P450 81F1 OS=Arabidopsis thaliana GN=CYP81F1 PE=2 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 3.285e-27
Identity = 83/261 (31.80%), Postives = 133/261 (50.96%), Query Frame = 1
Query:    4 GDTVENLRKICNSHAFSSRQLDANQHLRRKKIQDLLA----YVQENCRAGTAIHI------GQAAFGTTLNLISNTIFSIDLADPTSKTARE-FKQTNWGMMEEAGKPNLSDFFPVLENLDLQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTESKDMLDALLKICEDKSVEIDINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHPAVPLLL 753
            GD   NLR+IC+    SS +L   QH+R+ +I  +L     Y Q +  +    HI          F   + +++   +  D  D  +K   E FK+  + +   +G  + +D+ P+L+ L      + +      M D+  RL+D+  + +      E   M++ L+ + + +        IK L + +  AGT+T++ TLEWAM  LLRNP++L K R E+++ IGK   I+ESDI  LPYLQ V+ ETFRL P  P L+
Sbjct:  118 GDHWRNLRRICSQEILSSHRLINFQHIRKDEILRMLTRLSRYTQTSNESNDFTHIELEPLLSDLTFNNIVRMVTGKRYYGD--DVNNKEEAELFKKLVYDIAMYSGANHSADYLPILK-LFGNKFEKEVKAIGKSMDDILQRLLDECRRDK------EGNTMVNHLISLQQQQPEYYTDVIIKGLMMSMMLAGTETSAVTLEWAMANLLRNPEVLEKARSEIDEKIGKDRLIDESDIAVLPYLQNVVSETFRLFPVAPFLI 369          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C71BV_ARATH (Cytochrome P450 71B34 OS=Arabidopsis thaliana GN=CYP71B34 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 8.091e-26
Identity = 76/258 (29.46%), Postives = 136/258 (52.71%), Query Frame = 1
Query:    7 DTVENLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFGTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENL-----DLQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTESKDMLDALLKICEDKSV----EIDINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHPAVPLLL 753
            D  + +RK+     FSS+Q+ + Q ++ ++++ L+  + E+    T I++ +     T++++  T FS++  + T   +  F       +E  G  + SDF P +  +      LQG R R      + LD F   +    KQ++E     S+D +D LL++ ++++V    ++  N IK + + +  AG DT++ T+ WAM EL +NP ++ KV+ E+   I     I   D  +L YL+ V+KET+RLHP  PLL+
Sbjct:  121 DYWKEVRKLAVQELFSSKQVHSIQPIKDEEVKKLIDSISESAAQKTPINLNKTLLALTVSVVCRTAFSVNF-EGTVLNSERFNNIVREALEMLGSFSASDFIPYVGRIIDLLTGLQGRRERSM----RDLDAFYEQMFDLHKQKKEEG---SEDFVDLLLRLEKEEAVLGNDKLTRNHIKAILMDVLLAGMDTSAITMTWAMAELAKNPRVMKKVQSEIRSQIKNKERISFDDTDKLEYLKMVIKETWRLHPTTPLLI 370          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C71AC_ARATH (Cytochrome P450 71A12 OS=Arabidopsis thaliana GN=CYP71A12 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 8.091e-26
Identity = 69/254 (27.17%), Postives = 145/254 (57.09%), Query Frame = 1
Query:    4 GDTVENLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFGTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLD-LQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTESKDMLDALLKICEDKSV--EIDINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTI-GKGNPIEESDITRLPYLQAVLKETFRLHPAVPLLL 753
            G+    ++ +C  +  +++ + + + +R +++ +++  +++   + ++ ++ +  F T  + +++ I ++       +TAR+ K+    +ME  G+  + D+ P L  +D + G   R+        D+ D+++ + L+    ++     D +D LL I  +KS+  +   +DIK + L +F  GT T+S+ LEW MTEL+RNP+++ K++ E+  TI   G+ I+E D+  + YL+AV+KE FR+HP +PL+L
Sbjct:  122 GEYWRQMKSVCILNLLTNKMVASFEKIREEELNEMIKKLEKASSSSSSENLSEL-FVTLPSDVTSRI-ALGRKHSEDETARDLKKRVRQIMELLGEFPIGDYVPALAWIDRINGFNARIKEVSQGFSDLMDKVVQEHLEAGNHKE-----DFVDILLSIESEKSIGFQAQRDDIKFMILDMFIGGTSTSSTLLEWIMTELIRNPNVMKKLQDEIRSTIRPHGSYIKEKDVENMKYLKAVIKEVFRVHPPLPLIL 368          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C71BK_ARATH (Cytochrome P450 71B20 OS=Arabidopsis thaliana GN=CYP71B20 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.803e-25
Identity = 74/249 (29.72%), Postives = 128/249 (51.41%), Query Frame = 1
Query:   25 RKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFGTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLDL----QGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTESKD-MLDALLKICEDKSVEIDINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNP-IEESDITRLPYLQAVLKETFRLHPAVPLLL 753
            RK      F  +++ + +H+R ++   L+  + E+    + + + ++ F  T ++        +  +       + ++  +           SDFFPV     L     G  +R+   F K+  +F  +ID  L   + ++  +  D MLDA+ K  +D S+E+ I+ IK     +F AG DT + T+ WAMTEL++NP ++ KV+ E+ + +G     I E DI ++PYL+ V+KETFRLHPA PL+L
Sbjct:  126 RKFALRELFCLKKVQSFRHIREEECNFLVKQLSESAVNRSPVDLSKSLFWLTASIFFRVALGQNFHESNFIDKEKIEELVFEAETALASFTCSDFFPVAGLGWLVDWFSGQHKRLNDVFYKLDALFQHVIDDHLNPGRSKEHEDIIDSMLDAIHKEGKDSSLELIIDHIKGFLANIFLAGIDTGALTMIWAMTELVKNPKLIKKVQGEIREQLGSNKARITEEDIDKVPYLKMVIKETFRLHPAAPLIL 374          
The following BLAST results are available for this feature:
BLAST of CX297693 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 219
Match NameE-valueIdentityDescription
C75A7_EUSGR9.868e-3233.88Flavonoid 3',5'-hydroxylase OS=Eustoma grandifloru... [more]
C75A5_EUSGR9.868e-3233.88Flavonoid 3',5'-hydroxylase OS=Eustoma grandifloru... [more]
C80A1_BERST2.198e-3130.33Berbamunine synthase OS=Berberis stolonifera GN=CY... [more]
C71A1_PERAE1.425e-3029.80Cytochrome P450 71A1 OS=Persea americana GN=CYP71A... [more]
C75A1_PINTA2.275e-2828.19Cytochrome P450 750A1 OS=Pinus taeda GN=CYP750A1 P... [more]
C84A1_ARATH3.881e-2829.50Cytochrome P450 84A1 OS=Arabidopsis thaliana GN=CY... [more]
C81F1_ARATH3.285e-2731.80Cytochrome P450 81F1 OS=Arabidopsis thaliana GN=CY... [more]
C71BV_ARATH8.091e-2629.46Cytochrome P450 71B34 OS=Arabidopsis thaliana GN=C... [more]
C71AC_ARATH8.091e-2627.17Cytochrome P450 71A12 OS=Arabidopsis thaliana GN=C... [more]
C71BK_ARATH1.803e-2529.72Cytochrome P450 71B20 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionC06004C03SK RindPdig24 Citrus clementina cDNA clone C06004C03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX297693 ID=CX297693; Name=CX297693; organism=Citrus clementina; type=EST; length=754bp
GAGGGCGACACTGTGGAGAATCTTCGAAAAATATGCAACTCACATGCTTT
CTCTAGTCGCCAACTCGATGCCAATCAGCACCTTCGGCGTAAGAAAATCC
AAGATCTTCTAGCTTATGTCCAAGAAAATTGCCGTGCAGGTACAGCAATA
CATATTGGCCAAGCTGCTTTCGGCACTACGCTTAATTTGATATCCAACAC
AATTTTTTCTATTGACTTGGCTGATCCCACATCAAAAACTGCGCGAGAGT
TTAAGCAAACAAATTGGGGTATGATGGAAGAAGCTGGAAAGCCTAACTTG
TCCGATTTTTTTCCTGTGCTTGAGAATCTTGACTTGCAAGGTATAAGGCG
TCGCATGACAGTTTATTTTGGCAAGATGCTCGATGTATTTGATCGCTTGA
TTGATCAACGATTGAAGCAAAGACAAGAACGAGATTTCACCGAATCCAAA
GATATGTTAGATGCTCTTCTCAAAATTTGTGAAGACAAAAGCGTGGAGAT
TGATATAAATGATATCAAACACTTGTTTCTGGTTTTGTTTGCTGCGGGGA
CTGATACTACTTCGAGTACATTGGAATGGGCAATGACAGAACTACTTCGC
AACCCAGATATTTTATCAAAAGTCCGATTAGAGTTAGAACAAACGATTGG
CAAAGGCAATCCAATTGAGGAATCAGACATCACCCGCTTACCTTATCTAC
AAGCAGTACTCAAAGAAACCTTCAGGTTGCACCCGGCAGTTCCTCTTTTA
CTTC
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