CX297693

Overview
NameCX297693
Unique NameCX297693
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length754
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C81E1_GLYEC (Isoflavone 2'-hydroxylase OS=Glycyrrhiza echinata GN=CYP81E1 PE=1 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 2.354e-25
Identity = 76/256 (29.69%), Postives = 135/256 (52.73%), Query Frame = 1
Query:    4 GDTVENLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTA-IHIGQAAFGTTLNLISNTI-----FSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLDLQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTESKDMLDALLKICEDKSVEIDINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHPAVPLLL 753
            G+   NLR+I      S+ ++++   +RR + Q L+  + ++     A + +    +  T N I   I     +  D      + A +F+     +++ +G  N +DF P+L  LD + + +R+    GK  D F R + +  + ++ER  T    M+D LL + + +        IK L L +  AGTD+++ TLEW+M+ LL +P++L KV+ EL+  +G+   ++ESD+ +L YL+ V+ ET RL+   PLLL
Sbjct:  121 GEHWRNLRRITALDVLSNHRINSFSGIRRDETQRLITRLADDSSTNFAEMELSSRLYDMTFNNIMRMISGKRYYGEDCDTSDLQEASQFRDMVSELLQLSGANNKTDFMPLLRFLDFENLEKRLKDISGKT-DAFLRGLIEEHRTKKERANT----MIDHLLNLQDSQPEYYTDQIIKGLALAMLLAGTDSSAVTLEWSMSNLLNHPEVLKKVKDELDTHVGQDRLVDESDLPKLTYLKNVINETLRLYTPAPLLL 371          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C71BJ_ARATH (Cytochrome P450 71B19 OS=Arabidopsis thaliana GN=CYP71B19 PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 5.245e-25
Identity = 72/249 (28.92%), Postives = 128/249 (51.41%), Query Frame = 1
Query:   25 RKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFGTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLDL----QGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTESKD-MLDALLKICEDKSVEIDINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNP-IEESDITRLPYLQAVLKETFRLHPAVPLLL 753
            RK      F  +++ + +H+R ++   L+  + E+    + + + ++ F  T +++       +  +       + ++  +           SDFFPV     L     G  +R+   F K+  +F  +ID  L   + ++  +  D MLD + K  ED S+E+ I+ IK     +F AG DT + T+ WA+TEL++NP ++ KV+ ++ + +G     I E DI ++PYL+ V+KETFRLHPA PL+L
Sbjct:  126 RKFALRELFCLKKVQSFRHIREEECNFLVKQLSESAVDRSPVDLSKSLFWLTASILFRVALGQNFHESDFIDKEKIEELVFEAETALASFTCSDFFPVAGLGWLVDWFSGQHKRLNDVFYKLDALFQHVIDDHLNPGRSKEHEDIIDSMLDVIHKQGEDSSLELTIDHIKGFLANIFLAGIDTGAITMIWAVTELVKNPKLIKKVQGDIREQLGSNKERITEEDIEKVPYLKMVIKETFRLHPAAPLIL 374          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C78A4_PINRA (Cytochrome P450 78A4 OS=Pinus radiata GN=CYP78A4 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 8.946e-25
Identity = 74/246 (30.08%), Postives = 129/246 (52.44%), Query Frame = 1
Query:   22 LRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFGTTLNLISNTIFS--IDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLDLQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTESKDMLDALLKIC-EDKSVEIDINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHPAVPLL 750
            LR+I ++H F+ R++ A++  R+  +  +L  +Q+   +   + + +   G  LN I  ++F    D++    +  +  +  + G  +  G  N +D  P L  LD   I  R      ++      +I+Q  ++ Q R+  +  D +D LL +  EDK  E D+  I  L+ ++F  GTDTT+   EW M EL+ +P+   K + EL+  +G    +++SDI +LPY+QAV+KE  R+HP  PLL
Sbjct:  173 LRRIASAHLFAPRRIAAHEAGRQADVVAMLDDIQKEYHSKGVVRVRRHLQGAALNNIMGSVFGRRFDMSHENEEVKKLREMVDEGF-QLLGAFNWADHLPWLRPLDPLRIHARCARLVPRVTTFVSNIIEQHRREEQRRESGDQCDFVDVLLSLQGEDKLDEEDM--IAVLWEMIFR-GTDTTALLTEWTMAELVLHPEAQKKAQAELDAVVGHDRSVKDSDIPKLPYIQAVVKEALRMHPPGPLL 414          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C71BW_ARATH (Cytochrome P450 71B35 OS=Arabidopsis thaliana GN=CYP71B35 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.168e-24
Identity = 73/262 (27.86%), Postives = 139/262 (53.05%), Query Frame = 1
Query:    7 DTVENLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFGTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFP----VLENLD-LQGIRRR----MTVYFGKMLDVFDRLIDQRLKQRQERDFTESKDMLDALLKICEDKSV----EIDINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHPAVPLLL 753
            D  + +RK+C    FS++Q+ + Q ++ ++++ ++  + E+      +++       T++++  T F +   + T   +  F +     +E  G  + +DF P    +++ L  LQG R R    +  +F +M D+            +E     ++D +D LL++ ++++V    ++  N IK + L +  AG DT++ T+ WAMTEL RNP ++ KV+ E+   +G  + I   D+ +L YL+ V+KET+RLHP  PLLL
Sbjct:  120 DYWKEVRKLCVQELFSTKQVHSIQPIKDEEVKKMIDSIAESASQKNPVNLNNKCLELTVSVVCRTAFGVSF-EGTVLNSDRFNKIVREALEMLGSFSAADFIPYVGWIIDVLTGLQGRRERSKRDLNAFFEQMFDL-----------HKEGKKEGNEDFVDLLLRLEKEEAVLGNDKLTRNHIKAILLDVLLAGIDTSAITMTWAMTELARNPRVMKKVQSEIRTQMGNRSMISFEDMDQLEYLKMVIKETWRLHPTTPLLL 369          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C71AD_ARATH (Cytochrome P450 71A13 OS=Arabidopsis thaliana GN=CYP71A13 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.993e-24
Identity = 64/254 (25.20%), Postives = 141/254 (55.51%), Query Frame = 1
Query:    4 GDTVENLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFGTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLD-LQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTESKDMLDALLKICEDKS--VEIDINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTI-GKGNPIEESDITRLPYLQAVLKETFRLHPAVPLLL 753
            G+    ++ +C  +  +++ +++ + +R  ++  ++  +++   + ++ ++ +       ++ S    ++       +TAR+ K+    +ME  G+  + ++ P+L  +D ++G   ++        D+ D+++ + L+   ++      D +D LL I +DK+   ++  NDIK + L +F  GT TTS+ LEW MTEL+R+P  + K++ E+  TI   G+ I+E ++  + YL+AV+KE  RLHP++P++L
Sbjct:  122 GEYWRQMKSVCILNLLTNKMVESFEKVREDEVNAMIEKLEKASSSSSSENLSELFITLPSDVTSRV--ALGRKHSEDETARDLKKRVRQIMELLGEFPIGEYVPILAWIDGIRGFNNKIKEVSRGFSDLMDKVVQEHLEASNDK-----ADFVDILLSIEKDKNSGFQVQRNDIKFMILDMFIGGTSTTSTLLEWTMTELIRSPKSMKKLQDEIRSTIRPHGSYIKEKEVENMKYLKAVIKEVLRLHPSLPMIL 368          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C71DC_CATRO (Tabersonine 16-hydroxylase (Fragment) OS=Catharanthus roseus GN=CYP71D12 PE=1 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.603e-24
Identity = 70/257 (27.24%), Postives = 130/257 (50.58%), Query Frame = 1
Query:    4 GDTVENLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFGTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLDLQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTES-----KDMLDALLKICEDKSVEIDIND--IKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHPAVPLLL 753
            G+    LRKI      S + + + + +R +++ + +  +    + GT I++ +        + +   F        +K   EF +    + +   +PN++D FP L+ L L    +       K  DV    I +  K++  +  ++      +D++D LL I      E  + D  IK +   +F+AGT+T+S+T++WAM E+++NP ++ K + E+ +   +   ++E+ + +L YLQAV+KET RLHP VPLLL
Sbjct:  117 GNYWRQLRKISMMELLSQKSVQSFRSIREEEVLNFIKSI--GSKEGTRINLSKEISLLIYGITTRAAFG-----EKNKNTEEFIRLLDQLTKAVAEPNIADMFPSLKFLQLISTSKYKIEKIHKQFDVIVETILKGHKEKINKPLSQENGEKKEDLVDVLLNIQRRNDFEAPLGDKNIKAIIFNIFSAGTETSSTTVDWAMCEMIKNPTVMKKAQEEVRKVFNEEGNVDETKLHQLKYLQAVIKETLRLHPPVPLLL 366          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C71D8_SOYBN (Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.603e-24
Identity = 75/260 (28.85%), Postives = 131/260 (50.38%), Query Frame = 1
Query:    4 GDTVENLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFGTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLDLQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQER---------DFTESKDMLDALLKICEDKSVEIDIN--DIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHPAVPLL 750
            GD    +RKIC     S++++ +  H+R+ + + L+  +  +  AG+ I +    F      +S   F  +  D       EF       +   G   + D FP L+ L L   ++    +  +  D   ++++  L++  E+            E +D++D LL++ E  S+E+ +   +IK +   +FAAGTDT++STLEWAM+E+++NP +  K + EL Q       I E+D+  L YL++V+KET RLHP   L+
Sbjct:  125 GDYWRQIRKICTLELLSAKRVQSFSHIRQDENKKLIQSIHSS--AGSPIDLSGKLFSLLGTTVSRAAFGKENDDQD-----EFMSLVRKAITMTGGFEVDDMFPSLKPLHLLTRQKAKVEHVHQRAD---KILEDILRKHMEKRTRVKEGNGSEAEQEDLVDVLLRLKESGSLEVPMTMENIKAVIWNIFAAGTDTSASTLEWAMSEMMKNPKVKEKAQAELRQIFKGKEIIRETDLEELSYLKSVIKETLRLHPPSQLI 374          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C71BA_ARATH (Cytochrome P450 71B10 OS=Arabidopsis thaliana GN=CYP71B10 PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.603e-24
Identity = 74/261 (28.35%), Postives = 137/261 (52.49%), Query Frame = 1
Query:    7 DTVENLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFGTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFP----VLENLDLQGIRRRMTVYFGKMLDVF-DRLIDQRLKQRQERDFTESKDMLDALLKICEDKSV----EIDINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNP---IEESDITRLPYLQAVLKETFRLHPAVPLLL 753
            D  + LRK+C    F ++++++ Q ++  +++ L+  + E+    T +++        +N+I   +F ++    T     +F+      +E  G  + SDFFP    +++       RR  +V   + LD F +++ID  L++ +E       D +D LL++ ++++V    ++  N IK + + +   G +T++ T+ WAM EL+RNP ++ KV+ E+   IGK N    I   +I  L YL  V+KET RLHP  PLL+
Sbjct:  120 DYWKELRKLCVEELFCNKRINSIQPIKEAEMEKLIDSIAESASQKTLVNLSDTFLSLNVNVICKAVFGVNFQG-TVLNNDKFQDLVHEALEMLGSFSASDFFPYVGWIVDWFTGLHARRERSV---RDLDAFYEQMIDLHLQKNREES---EDDFVDLLLRLEKEEAVLGYGKLTRNHIKAILMNILLGGINTSAITMTWAMAELIRNPRVMKKVQSEIRAQIGKNNKTRIISLDEINHLSYLNMVIKETCRLHPVAPLLV 373          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C71BE_ARATH (Cytochrome P450 71B14 OS=Arabidopsis thaliana GN=CYP71B14 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 9.891e-24
Identity = 66/250 (26.40%), Postives = 134/250 (53.60%), Query Frame = 1
Query:   22 LRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFGTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENL--DLQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTESKDMLDALLKICEDKS----VEIDINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHPAVPLLL 753
            +RK+     ++++++ + Q++R++++   + +++++      +++ Q     + ++I    F I L    SK A  +++   G ME  G+   +D+FP++  +   + G+  +    F +M   FD+ I   L+    +D     D++  LLK+ + ++     ++  N  K + L +  AG DT+  T+ W MT L++NP ++ K + E+ + I   + I E DI RL YL+ V+KET R++P VPLL+
Sbjct:  124 VRKMTVIELYTAKRVKSFQNVRQEEVASFVDFIKQHASLEKTVNMKQKLVKLSGSVICKVGFGISLE--WSKLANTYEEVIQGTMEVVGRFAAADYFPIIGRIIDRITGLHSKCEKVFKEMDSFFDQSIKHHLEDTNIKD-----DIIGLLLKMEKGETGLGEFQLTRNHTKGILLNVLIAGVDTSGHTVTWVMTHLIKNPRVMKKAQAEVREVIKNKDDITEEDIERLEYLKMVIKETLRINPLVPLLI 366          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C71D6_SOLCH (Cytochrome P450 71D6 OS=Solanum chacoense GN=CYP71D6 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.759e-23
Identity = 71/259 (27.41%), Postives = 136/259 (52.51%), Query Frame = 1
Query:    4 GDTVENLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFGTTLNLISNTIFSI--DLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLDLQGIRRRMTVYFGKMLD-VFDRLIDQRLKQRQERDFTE----SKDMLDALLKICEDKSVEIDIND--IKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHPAVPLLL 753
            G+  + +RKIC +   S++ + +   +R  ++  L+  +Q +  +G  ++  +     T ++   + F       D   K  RE  +   G        +++D FP  + L + G  +R  +   + +D + + +I++  K    R   +     ++++D LLK+  DKS++  IN+  IK + + +FAAGT+T+S+T  WAM E+L+NP +L+K + E+ +        +E+D+  L YL+ V+KET RLH  +PLL+
Sbjct:  121 GEYWKQMRKICVTEVLSAKSVRSFSSIRCDEVVRLIDSIQSSSSSGELVNFKERVIWFTSSMTCRSAFGQLPKEQDMFIKLIREVIRLAEGF-------DVADIFPSYKFLHVFGRAKRKLLNVHRKVDAIVEDVINEHKKNFATRKNDDHALGGENLIDVLLKLMNDKSLQFPINNDNIKAIIIDMFAAGTETSSTTTVWAMVEMLKNPRVLAKAQAEVREAFRNKVTFDENDVEDLKYLKLVIKETMRLHAPIPLLV 372          
The following BLAST results are available for this feature:
BLAST of CX297693 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 219
Match NameE-valueIdentityDescription
C81E1_GLYEC2.354e-2529.69Isoflavone 2'-hydroxylase OS=Glycyrrhiza echinata ... [more]
C71BJ_ARATH5.245e-2528.92Cytochrome P450 71B19 OS=Arabidopsis thaliana GN=C... [more]
C78A4_PINRA8.946e-2530.08Cytochrome P450 78A4 OS=Pinus radiata GN=CYP78A4 P... [more]
C71BW_ARATH1.168e-2427.86Cytochrome P450 71B35 OS=Arabidopsis thaliana GN=C... [more]
C71AD_ARATH1.993e-2425.20Cytochrome P450 71A13 OS=Arabidopsis thaliana GN=C... [more]
C71DC_CATRO2.603e-2427.24Tabersonine 16-hydroxylase (Fragment) OS=Catharant... [more]
C71D8_SOYBN2.603e-2428.85Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=... [more]
C71BA_ARATH2.603e-2428.35Cytochrome P450 71B10 OS=Arabidopsis thaliana GN=C... [more]
C71BE_ARATH9.891e-2426.40Cytochrome P450 71B14 OS=Arabidopsis thaliana GN=C... [more]
C71D6_SOLCH3.759e-2327.41Cytochrome P450 71D6 OS=Solanum chacoense GN=CYP71... [more]

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Properties
Property NameValue
Genbank descriptionC06004C03SK RindPdig24 Citrus clementina cDNA clone C06004C03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX297693 ID=CX297693; Name=CX297693; organism=Citrus clementina; type=EST; length=754bp
GAGGGCGACACTGTGGAGAATCTTCGAAAAATATGCAACTCACATGCTTT
CTCTAGTCGCCAACTCGATGCCAATCAGCACCTTCGGCGTAAGAAAATCC
AAGATCTTCTAGCTTATGTCCAAGAAAATTGCCGTGCAGGTACAGCAATA
CATATTGGCCAAGCTGCTTTCGGCACTACGCTTAATTTGATATCCAACAC
AATTTTTTCTATTGACTTGGCTGATCCCACATCAAAAACTGCGCGAGAGT
TTAAGCAAACAAATTGGGGTATGATGGAAGAAGCTGGAAAGCCTAACTTG
TCCGATTTTTTTCCTGTGCTTGAGAATCTTGACTTGCAAGGTATAAGGCG
TCGCATGACAGTTTATTTTGGCAAGATGCTCGATGTATTTGATCGCTTGA
TTGATCAACGATTGAAGCAAAGACAAGAACGAGATTTCACCGAATCCAAA
GATATGTTAGATGCTCTTCTCAAAATTTGTGAAGACAAAAGCGTGGAGAT
TGATATAAATGATATCAAACACTTGTTTCTGGTTTTGTTTGCTGCGGGGA
CTGATACTACTTCGAGTACATTGGAATGGGCAATGACAGAACTACTTCGC
AACCCAGATATTTTATCAAAAGTCCGATTAGAGTTAGAACAAACGATTGG
CAAAGGCAATCCAATTGAGGAATCAGACATCACCCGCTTACCTTATCTAC
AAGCAGTACTCAAAGAAACCTTCAGGTTGCACCCGGCAGTTCCTCTTTTA
CTTC
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