CX297693

Overview
NameCX297693
Unique NameCX297693
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length754
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C71BO_ARATH (Cytochrome P450 71B24 OS=Arabidopsis thaliana GN=CYP71B24 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.759e-23
Identity = 71/259 (27.41%), Postives = 142/259 (54.83%), Query Frame = 1
Query:    4 GDTVENLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFGTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFP--VLENLD-LQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTESKDMLDALLKICEDK----SVEIDINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIG--KGNPIEESDITRLPYLQAVLKETFRLHPAVPLLL 753
            G+++  LRK+     FS+ ++ + +++R ++   ++  ++E     +++ + Q  FG   ++I  + F     +     A + +   + + ++ G  + SD FP  +   +D + G  +++   F ++  + + +ID  LK   E    +  D++D+LL +   +    S ++ I+++K +   ++ AG DT++ T+ WAM EL++NP ++ KV+ E+   IG  +   IEE D+ +L YL+ V+KET RLHPA PLLL
Sbjct:  115 GESLRELRKLSFLKFFSTTKVRSFRYIREEENDLMVKKLKEAALKKSSVDLSQTLFGLVGSIIFRSAFGQRFDEGNHVNAEKIEDLMFEV-QKLGALSNSDLFPGGLGWFVDFVSGHNKKLHKVFVEVDTLLNHIIDDHLKNSIEEITHDRPDIIDSLLDMIRKQEQGDSFKLTIDNLKGIIQDIYLAGVDTSAITMIWAMAELVKNPRVMKKVQDEIRTCIGIKQNEKIEEDDVDKLQYLKLVVKETLRLHPAAPLLL 372          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C71BN_ARATH (Cytochrome P450 71B23 OS=Arabidopsis thaliana GN=CYP71B23 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.759e-23
Identity = 73/256 (28.52%), Postives = 135/256 (52.73%), Query Frame = 1
Query:    4 GDTVENLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFGTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLD-LQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTESKDMLDALL----KICEDKSVEIDINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIG-KGNPIEESDITRLPYLQAVLKETFRLHPAVPLLL 753
            G+    LRK+     FS ++ ++ +++R ++   L+  + E     + +++ +A F  + +++    F  +L +         +       +   K   S+FFP    LD + G  + +   F  +   F++++D  LK    R   E+ D++D ++    K  +D S ++  + IK +   +F AG +T+++T+ WAMTEL+RNP ++ KV+ E+   +G K + I E D+ +L Y + V+KETFRLHPA PLLL
Sbjct:  120 GEEWRALRKLAVIELFSLKKFNSFRYIREEENDLLVKKLSEASEKQSPVNLKKALFTLSASIVCRLAFGQNLHESEFIDEDSMEDLASRSEKIQAKFAFSNFFPGGWILDKITGQSKSLNEIFADLDGFFNQVLDDHLKPG--RKVLETPDVVDVMIDMMNKQSQDGSFKLTTDHIKGIISDIFLAGVNTSATTILWAMTELIRNPRVMKKVQDEVRTVLGEKRDRITEQDLNQLNYFKLVIKETFRLHPAAPLLL 373          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C71D7_SOLCH (Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71D7 PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.909e-23
Identity = 72/258 (27.91%), Postives = 132/258 (51.16%), Query Frame = 1
Query:    4 GDTVENLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFGTTLNLISNTIFSIDLADPTS--KTAREFKQTNWGMMEEAGKPNLSDFFPVLENLD-LQGIRRRMTVYFGKMLDVFDRLIDQRLKQ---RQERDFTESKDMLDALLKICEDKSVEIDIND--IKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHPAVPLLL 753
            GD    +RKIC     S++ + +   +R  ++  L+  +Q    +G  ++  +     T ++   + F   L +     K  RE      G        +++D FP  + L    G ++++     K+  + + +I +  K    R+  D    +D++DAL+++  DKS++  IN+  IK + + LFAAGT+T+S+T  WAM E+L+NP + +K + ++ +        +E+D+  L YL+ V+KET RLH  VPLL+
Sbjct:  121 GDYWRQMRKICIMEVLSAKSVRSFSSIRHDEVVRLIDSIQPCFTSGELVNFTERIIWFTSSMTCRSAFGQVLKEQEVFIKLIREVISLAEGF-------DVADIFPSYKFLHGFGGAKQKLLNAHRKVDSIVEDVIKEHKKNLATRKSDDAIGGEDLVDALVRLMNDKSLQFPINNDNIKAVIIDLFAAGTETSSTTTVWAMAEMLKNPSVFAKAQAKVREAFRDKVTFDENDVEELKYLKLVIKETMRLHAPVPLLV 371          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C78A1_MAIZE (Cytochrome P450 78A1 OS=Zea mays GN=CYP78A1 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 6.411e-23
Identity = 75/255 (29.41%), Postives = 126/255 (49.41%), Query Frame = 1
Query:    4 GDTVENLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFGTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEA----GKPNLSDFFPVLENL-DLQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERD-FTESKDMLDALLKICEDKSVEIDINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHPAVPLL 750
            G+    LR++ ++H FS R++ +++  R+   + +L  +     A  A+ +        LN I  ++F     D TS       +    M+ E     G  N SD  P L +L D   + RR      ++      +ID+  ++RQ      ++ D +D LL +  D+ +  D  D+  +   +   GTDTT+   EW M EL+R+P + ++VR E++  +G G    ++D+ R+PYLQAV+KET R HP  PLL
Sbjct:  162 GEYWRRLRRVASTHLFSPRRVASHEPGRQGDAEAMLRSIAAEQSASGAVALRPHLQAAALNNIMGSVFGTRY-DVTSGAGAAEAEHLKSMVREGFELLGAFNWSDHLPWLAHLYDPSNVTRRCAALVPRVQTFVRGVIDEHRRRRQNSAALNDNADFVDVLLSLEGDEKLGDD--DMVAILWEMVFRGTDTTALLTEWCMAELVRHPAVQARVRAEVDAAVGAGGCPTDADVARMPYLQAVVKETLRAHPPGPLL 413          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C71B4_ARATH (Cytochrome P450 71B4 OS=Arabidopsis thaliana GN=CYP71B4 PE=2 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 6.411e-23
Identity = 72/260 (27.69%), Postives = 132/260 (50.77%), Query Frame = 1
Query:    4 GDTVENLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFGTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENL----DLQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTESKDMLDALLKICEDK----SVEIDINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIG--KGNPIEESDITRLPYLQAVLKETFRLHPAVPLLL 753
            GD    LRK+     FS +++ + +++R ++   ++  ++E     + + + +  FG T ++I  T F     D         K+  +  +        SDFFP          + G  +R+   F ++   F+ ++D    ++  +D     DM+DA+L + +++    S ++ ++ +K +   ++ AG DT++ TL WAM EL+RNP ++ K + E+   IG  +   I E D+ +L YL+ V+KET RLHPA PLLL
Sbjct:  121 GDEWRELRKLSVREFFSVKKVQSFKYIREEENDLMIKKLKELASKQSPVDLSKILFGLTASIIFRTAFGQSFFDNKHVDQESIKELMFESLSNMTF-RFSDFFPTAGLKWFIGFVSGQHKRLYNVFNRVDTFFNHIVDDHHSKKATQD---RPDMVDAILDMIDNEQQYASFKLTVDHLKGVLSNIYHAGIDTSAITLIWAMAELVRNPRVMKKAQDEIRTCIGIKQEGRIMEEDLDKLQYLKLVVKETLRLHPAAPLLL 376          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C71B3_ARATH (Cytochrome P450 71B3 OS=Arabidopsis thaliana GN=CYP71B3 PE=2 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 6.411e-23
Identity = 69/259 (26.64%), Postives = 139/259 (53.67%), Query Frame = 1
Query:    4 GDTVENLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFGTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLEN--LD-LQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTESKDMLDALLKIC----EDKSVEIDINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIG--KGNPIEESDITRLPYLQAVLKETFRLHPAVPLLL 753
            G+    LRK+   + FS++++ + +++R ++   ++  ++E+ +    + + Q  F    ++I    F   L D      +E  +     +++ G  + SD FP      +D + G  + +   F ++  + + +ID  LK  +++   +  D++D++L+      +D+S ++ I+ +K +   ++ AG DT++ T+ WAM EL++NP ++ K + E+   IG  +   IEE D+ +L YL+ V+KET RLHP  PLLL
Sbjct:  118 GEVSRELRKLSLINFFSTQKVRSFRYIREEENDLMVKKLKESAKKKNTVDLSQTLFYLVGSIIFRATFGQRL-DQNKHVNKEKIEELMFEVQKVGSLSSSDIFPAGVGWFMDFVSGRHKTLHKVFVEVDTLLNHVIDGHLKNPEDKTNQDRPDIIDSILETIYKQEQDESFKLTIDHLKGIIQNIYLAGVDTSAITMIWAMAELVKNPRVMKKAQEEIRTCIGIKQKERIEEEDVDKLQYLKLVIKETLRLHPPAPLLL 375          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C71DD_MENPI (Cytochrome P450 71D13 OS=Mentha piperita GN=CYP71D13 PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.094e-22
Identity = 65/245 (26.53%), Postives = 125/245 (51.02%), Query Frame = 1
Query:   22 LRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFGTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLDLQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTESKDMLDALLKICEDKSVEIDI--NDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHPAVPLL 750
            +RKIC S   S+R + +   +R+ ++  LL +++ +  AG A+ + +     T ++I    F   + D       E  +     +  A    L+D FP  + L+L    +       + +D     I +  K ++  +F   +D++D L ++ +D  +++ I  N IK      F+AGT+T+S+T  W M EL+RNP++++K + E+   +      +  D+  L Y+++V+KET R+HP +PL+
Sbjct:  131 MRKICVSELLSARNVRSFGFIRQDEVSRLLGHLRSSAAAGEAVDLTERIATLTCSIICRAAFGSVIRDH-----EELVELVKDALSMASGFELADMFPSSKLLNLLCWNKSKLWRMRRRVDAILEAIVEEHKLKKSGEFG-GEDIIDVLFRMQKDSQIKVPITTNAIKAFIFDTFSAGTETSSTTTLWVMAELMRNPEVMAKAQAEVRAALKGKTDWDVDDVQELKYMKSVVKETMRMHPPIPLI 369          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C71BQ_ARATH (Cytochrome P450 71B26 OS=Arabidopsis thaliana GN=CYP71B26 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.094e-22
Identity = 69/255 (27.06%), Postives = 131/255 (51.37%), Query Frame = 1
Query:   16 ENLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFGTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFP----VLENLD-LQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTESKDMLDALLKICEDKSV----EIDINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHPAVPLLL 753
            + LRK+C+   FS+ ++ + Q ++ ++++ ++  + E+      +++ +     T +++    F +        + R F +      E  G  + SDF P    +++  + LQG R++      + LD F   I    K+ +E     S+D++D LL++ +++ V    ++  N IK + + +   G DT++ T+ WAM EL +NP ++ KV+ E+   I     I   D  +L YL+ V+KET+RLHP  PLLL
Sbjct:  124 KELRKLCSQELFSANKIQSIQPIKDEEVKKVIDSIAESSSLKNPVNLSKTFLALTTSVVCKAAFGVSFEGSVLNSDR-FNKLVRDTFEMLGSFSASDFIPYVGWIIDKFNGLQGWRKKSF----RDLDAFYEQIFDLHKEEKE---VGSEDLVDVLLRLEKEEIVVGNGKLTRNHIKAILMNILLGGIDTSAITMTWAMAELAKNPRVMKKVQAEIRNQIKNKERISFDDTDKLEYLKMVIKETWRLHPPTPLLL 370          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C71BM_ARATH (Cytochrome P450 71B22 OS=Arabidopsis thaliana GN=CYP71B22 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.428e-22
Identity = 69/257 (26.85%), Postives = 130/257 (50.58%), Query Frame = 1
Query:    4 GDTVENLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFGTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFP-----VLENLDLQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTESKD-MLDALLKICEDKSVEIDINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKG-NPIEESDITRLPYLQAVLKETFRLHPAVPLLL 753
            GD    +RK+     FSS++L A +++R ++ + L+  + ++    T + + +A F  T +++    F  +  +       + +          G    +DFFP     V++ +   G    +   F ++ + F  +ID  LK  Q +D ++    MLD + K  +  S ++  + +K +   +F AG +  + T+ WAMTEL R+P ++ K++ E+ + +G     I E D+ ++ YL+ V++ETFRLHP  PLLL
Sbjct:  117 GDDWREMRKLAMLELFSSKKLKAFRYIREEESEVLVNKLSKSAETRTMVDLRKALFSYTASIVCRLAFGQNFHECDFVDMDKVEDLVLESETNLGSFAFTDFFPAGLGWVIDRIS--GQHSELHKAFARLSNFFQHVIDDHLKPGQSQDHSDIIGVMLDMINKESKVGSFQVTYDHLKGVMSDVFLAGVNAGAITMIWAMTELARHPRVMKKLQQEIREILGDNKEKITEQDLEKVHYLKLVIEETFRLHPPAPLLL 371          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C71BB_ARATH (Cytochrome P450 71B11 OS=Arabidopsis thaliana GN=CYP71B11 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.428e-22
Identity = 66/250 (26.40%), Postives = 128/250 (51.20%), Query Frame = 1
Query:   22 LRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFGTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENL--DLQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTESKDMLDALLKI----CEDKSVEIDINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHPAVPLLL 753
            +RK+     ++++++ + QH R++++  L+ ++ +       +++       + ++I   +F I+L    SK    +++   G ME  G    +D+FP++  +   + G+  +    F  M   FD+ I   L+    +D     D++D LLK+     E    ++  ++ K +   +  AG DT++  + W MT L+ NP ++ K + E+ + I   + I E DI RL YL+ V+KETFR+ P VPLL+
Sbjct:  124 VRKMTVVELYTAKRVQSFQHTRKEEVASLVDFITQAASLEKPVNLNTKLMKLSGSVICRVVFGINLKG--SKLENLYEEVIQGTMEVVGSFAAADYFPIIGRIIDRITGLHSKCEKIFKAMDAFFDQSIKHHLEDESIKD-----DIIDLLLKMERGEIELGEFQLTRDNTKGILFNILNAGIDTSAQVMTWVMTYLISNPRVMKKAQAEVREVIKNKDDIIEEDIERLEYLKMVVKETFRVLPLVPLLI 366          
The following BLAST results are available for this feature:
BLAST of CX297693 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 219
Match NameE-valueIdentityDescription
C71BO_ARATH3.759e-2327.41Cytochrome P450 71B24 OS=Arabidopsis thaliana GN=C... [more]
C71BN_ARATH3.759e-2328.52Cytochrome P450 71B23 OS=Arabidopsis thaliana GN=C... [more]
C71D7_SOLCH4.909e-2327.91Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71... [more]
C78A1_MAIZE6.411e-2329.41Cytochrome P450 78A1 OS=Zea mays GN=CYP78A1 PE=2 S... [more]
C71B4_ARATH6.411e-2327.69Cytochrome P450 71B4 OS=Arabidopsis thaliana GN=CY... [more]
C71B3_ARATH6.411e-2326.64Cytochrome P450 71B3 OS=Arabidopsis thaliana GN=CY... [more]
C71DD_MENPI1.094e-2226.53Cytochrome P450 71D13 OS=Mentha piperita GN=CYP71D... [more]
C71BQ_ARATH1.094e-2227.06Cytochrome P450 71B26 OS=Arabidopsis thaliana GN=C... [more]
C71BM_ARATH1.428e-2226.85Cytochrome P450 71B22 OS=Arabidopsis thaliana GN=C... [more]
C71BB_ARATH1.428e-2226.40Cytochrome P450 71B11 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionC06004C03SK RindPdig24 Citrus clementina cDNA clone C06004C03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX297693 ID=CX297693; Name=CX297693; organism=Citrus clementina; type=EST; length=754bp
GAGGGCGACACTGTGGAGAATCTTCGAAAAATATGCAACTCACATGCTTT
CTCTAGTCGCCAACTCGATGCCAATCAGCACCTTCGGCGTAAGAAAATCC
AAGATCTTCTAGCTTATGTCCAAGAAAATTGCCGTGCAGGTACAGCAATA
CATATTGGCCAAGCTGCTTTCGGCACTACGCTTAATTTGATATCCAACAC
AATTTTTTCTATTGACTTGGCTGATCCCACATCAAAAACTGCGCGAGAGT
TTAAGCAAACAAATTGGGGTATGATGGAAGAAGCTGGAAAGCCTAACTTG
TCCGATTTTTTTCCTGTGCTTGAGAATCTTGACTTGCAAGGTATAAGGCG
TCGCATGACAGTTTATTTTGGCAAGATGCTCGATGTATTTGATCGCTTGA
TTGATCAACGATTGAAGCAAAGACAAGAACGAGATTTCACCGAATCCAAA
GATATGTTAGATGCTCTTCTCAAAATTTGTGAAGACAAAAGCGTGGAGAT
TGATATAAATGATATCAAACACTTGTTTCTGGTTTTGTTTGCTGCGGGGA
CTGATACTACTTCGAGTACATTGGAATGGGCAATGACAGAACTACTTCGC
AACCCAGATATTTTATCAAAAGTCCGATTAGAGTTAGAACAAACGATTGG
CAAAGGCAATCCAATTGAGGAATCAGACATCACCCGCTTACCTTATCTAC
AAGCAGTACTCAAAGAAACCTTCAGGTTGCACCCGGCAGTTCCTCTTTTA
CTTC
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