CX297693

Overview
NameCX297693
Unique NameCX297693
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length754
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C71BS_ARATH (Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=CYP71B28 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 9.258e-22
Identity = 71/259 (27.41%), Postives = 130/259 (50.19%), Query Frame = 1
Query:    4 GDTVENLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFGTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLDLQGI---RRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTESKDMLDALLKICEDKSVEID-----INDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIG-KGNPIEESDITRLPYLQAVLKETFRLHPAVPLLL 753
            G+    +RK+     FSS++L + +++R ++    +  + +     + +++ +  F    +++    F I+L +                 +       SDFFP L    ++ I   R+R+   + ++   F  ++D  LK  +E     S D++D ++ + + +  E D      + +K +   +F AG  T+S+TL WAMTEL+RNP ++ KV+ E+  T+G K   I E D+ +L Y + ++KE FRLHPA PLLL
Sbjct:  117 GEDWRTMRKLSVVELFSSKKLQSFRYIREEENDLCVKKLSDLASRRSLVNLEKTLFTLVGSIVCRIGFGINLRECEFVDEDSIDDLVHKSEDVIRNSIFSDFFPGLMGRLIEWIFSERKRLNRLYSEVDTFFQNILDDHLKPGRE-----SSDIIDVMIDMMKKQEKEGDSFKFTTDHLKGMISDIFLAGVGTSSTTLIWAMTELIRNPRVMKKVQDEIRTTLGDKKERITEEDLNQLHYFKLMVKEIFRLHPAAPLLL 370          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C71BY_ARATH (Cytochrome P450 71B37 OS=Arabidopsis thaliana GN=CYP71B37 PE=2 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 1.209e-21
Identity = 74/258 (28.68%), Postives = 131/258 (50.78%), Query Frame = 1
Query:    7 DTVENLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFGTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFP----VLENLD-LQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTESKDMLDALLKICEDKSV----EIDINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHPAVPLLL 753
            D  + LR++C    FS +Q+   Q +R ++++ L+    E+    T +++ +     T+ +I    F +     T   +  F +         G  + SD+FP    +++ L  LQG R R      + LD F    +Q     ++ +    +D +D LLK+ ++++V    ++  N IK + + +   G  T++ T+ WAMTEL+RNP ++ KV+ E+   IG  + I   DI +L YL+ V+ ET+RLHP  PLL+
Sbjct:  121 DYWKELRRMCVQELFSPKQVHLIQPIREEEVKKLMNSFSESAAQKTPVNLSEKLASLTVGVICKAAFGVSFQG-TVLNSDNFDKLIHDAFLFLGSFSASDYFPNVGWIIDWLTGLQGQRERSV----RGLDAF---YEQMFDLHKQGNKEGVEDFVDLLLKLEKEETVLGYGKLTRNHIKAVLMNVLLGGIGTSAITMTWAMTELMRNPRVMKKVQSEIRNQIGGKSMICLDDIDQLHYLKMVINETWRLHPPAPLLV 370          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C71BH_ARATH (Cytochrome P450 71B17 OS=Arabidopsis thaliana GN=CYP71B17 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.209e-21
Identity = 69/256 (26.95%), Postives = 123/256 (48.05%), Query Frame = 1
Query:    4 GDTVENLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFGTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLEN---LD-LQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTESKD-MLDALLKICEDKSVEIDINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNP-IEESDITRLPYLQAVLKETFRLHPAVPLLL 753
            G+  +  R+      F S++L +  +++  +   L+  + E+    + + + +  F    +++    F     +       +  +  +      G    SDFFP+      +D + G  +R+   F K+  +   +ID      + +D  +  D MLD + K  +D S+ + I+ IK L   +  AG DT + T+ W MTEL RNP+I+ KV+ E+   +G     I + D+ ++P+L  V+KETFRLHP  PLLL
Sbjct:  119 GEEWKERRRFLVGELFCSKKLQSFIYIKEVECNFLVKKLSESAVDQSPVDLSKTLFWLAASILFRVAFGQSFHESEFTDTDKIDELVFETETAQGSFTCSDFFPIAGLGWLVDWISGQHKRLNDVFLKLDALLQHVIDDHSNPGRSKDHKDIVDVMLDVMHKQGKDDSLRLTIDHIKGLLTNIIIAGIDTGALTMIWTMTELARNPEIMKKVQGEIRDRLGNNRERITKEDLDKVPFLNLVIKETFRLHPVAPLLL 374          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C71B2_ARATH (Cytochrome P450 71B2 OS=Arabidopsis thaliana GN=CYP71B2 PE=2 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 1.209e-21
Identity = 69/255 (27.06%), Postives = 132/255 (51.76%), Query Frame = 1
Query:    4 GDTVENLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFGTTLNLISNTIFSIDLADPTSKTARE-FKQTNWGMMEEAGKPNLSDFFP--VLENLDLQGIRRRMTVYFGKMLDVF-DRLIDQRLKQRQERDFTESKDMLDALLKICEDKSVEIDINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIG-KGNPIEESDITRLPYLQAVLKETFRLHPAVPLLL 753
            G+    +RK+     FSS+++ + +++R +++  ++  V E+    + + + +  F  T ++I       +  +      ++  ++      E  G    SDFFP  +   +D    R +      K LD F   +ID  LK    ++      +LD + K  +  S +++++++K + + +F AG DT++ T+ WAMTEL+RNP ++ K +  +  T+G K   I E D+ ++ YL  +LKETFRLHPA+P ++
Sbjct:  120 GEYWREVRKLAVIELFSSKKVQSFRYIREEEVDFVVKKVSESALKQSPVDLSKTFFSLTASIICRVALGQNFNESGFVIDQDRIEELVTESAEALGTFTFSDFFPGGLGRFVDWLFQRHKKINKVFKELDAFYQHVIDDHLKPEGRKNQDIVTLILDMIDKQEDSDSFKLNMDNLKAIVMDVFLAGIDTSAVTMIWAMTELIRNPRVMKKAQESIRTTLGLKKERITEEDLGKVEYLNHILKETFRLHPALPFVV 374          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C71AM_ARATH (Cytochrome P450 71A22 OS=Arabidopsis thaliana GN=CYP71A22 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.579e-21
Identity = 71/254 (27.95%), Postives = 142/254 (55.91%), Query Frame = 1
Query:    4 GDTVENLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFGTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLD-LQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTESKDMLDALLKICEDKSV--EIDINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGN-PIEESDITRLPYLQAVLKETFRLHPAVPLLL 753
            G+    ++ +C  H  +++ + + +++R+++I  ++  +Q++  +   +++ +     T ++IS        +D T     +FK+    + +  G+  +  + P L  +D + G+  ++     K  +  D  +++ ++  ++ D  +  D +D LL+I  +KSV  EID   IK + L +   GTDT+ + +EWAMTELL  P+ L++++ E+ +TI KGN  + E DI  + YL+AV+KET RLHP +PL++
Sbjct:  121 GEYWRQMKSVCVLHLLTNKMVRSFRNVRQEEISLMMEKIQKS--SSLQVNLSELLGSLTNDVISRVALGRKYSDET-----DFKELMKRLTKLLGEFCVGTYVPWLAWIDWISGLDGQLK----KTGNDLDEFLEKVVQDHEDGD-AQRTDFVDVLLRIQREKSVGFEIDRLSIKAIILDVVVGGTDTSYALMEWAMTELLHRPECLNRLQEEV-RTICKGNSSVSEDDIKDMNYLKAVIKETMRLHPPLPLMV 361          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C71BP_ARATH (Cytochrome P450 71B25 OS=Arabidopsis thaliana GN=CYP71B25 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.062e-21
Identity = 72/259 (27.80%), Postives = 134/259 (51.74%), Query Frame = 1
Query:    7 DTVENLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFGTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKP---NLSDFFPVLENLD-----LQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTESK-DMLDALLKICEDKSVEIDINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIG-KGNPIEESDITRLPYLQAVLKETFRLHPAVPLLL 753
            D    LRK+     FS +++ + +++R ++   ++  +++     + + + +  F    + +   +F    +D    +  + ++    ++ EA K      SD FP+   L      + G  + +   F ++ +  + +ID   KQ Q +D ++    +LD +    +DKS ++ I+ +K +   +F AG DT++ T+ WAM EL+ NP ++ KV+ E+   IG K   IEE D+ +L YL+ V+KET RLHPA PLLL
Sbjct:  122 DEWRELRKVAVREYFSVKKVQSFRYVREEENHLMVKKLRDLALKQSPVDLSKTLFCLAASTVFRPVFGQSFSDNKHFSEEKIEE----LVFEAQKSLTFKFSDLFPI-PGLGWFIGFVSGQHKGLHKVFIEVDNFLNHMIDDHQKQNQPQDRSDIVGSLLDMIHNQEQDKSFKLTIDHLKGITQDIFLAGIDTSAITMIWAMAELVNNPRVMKKVQDEIRSCIGIKKERIEEEDVGKLQYLKLVIKETLRLHPAAPLLL 375          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C71C4_MAIZE (Cytochrome P450 71C4 OS=Zea mays GN=CYP71C4 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.694e-21
Identity = 73/264 (27.65%), Postives = 133/264 (50.38%), Query Frame = 1
Query:    4 GDTVENLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFGTTLNLISNTIFS-IDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLDL---------QGIRRRMTVYFGKMLDVFDRLIDQ---RLKQRQERDFTESKDMLDALLKICEDKSVEIDINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNP-IEESDITRLPYLQAVLKETFRLHPAVPLLL 753
            GD     RK+   H  ++ ++ + +  R ++++  L  V+    A   + + +       NL+   +     + +  ++  RE    N G++   G  ++ D+FP L  ++L         + +R+R         D+ D+LID    R+   Q+ D  + KD +  LL + ++  +  D   IK + + +F AGTDT+  TLE+AMTEL+R P ++ K++ E+ + +  G   + E ++  +  L+AV+KET RLHP VPLLL
Sbjct:  158 GDHFRKARKLVTVHLLNASKVRSQRPAREEEVRGALDRVRRAAAAREPVDMSELLHSFVNNLVCRAVSGKFSMEEGRNRLFRELTDINAGLL---GGFHIQDYFPRLGRIELVRKVACAKTRRVRKRWD-------DLLDKLIDDHAARMATHQDED--DDKDFIYVLLSLQKEYGLTRD--HIKAILIDMFEAGTDTSYMTLEFAMTELIRKPHLMKKLQEEVRRNVPAGQEMVTEDNLPGMTDLKAVIKETLRLHPPVPLLL 407          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C83A1_ARATH (Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CYP83A1 PE=1 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 3.518e-21
Identity = 66/249 (26.51%), Postives = 129/249 (51.81%), Query Frame = 1
Query:   22 LRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFGTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLD-LQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTESKDMLDALLKICEDK--SVEIDINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTI-GKGNP-IEESDITRLPYLQAVLKETFRLHPAVPLLL 753
            +RK+  +H FS  ++   +H+R ++ + ++  + +       + I +     T +++    F     +   +  R F +  +G     GK   SDFFP    LD L G+   M   F +       ++++ L  ++ +  TES  M+D L+ I +++  + E  ++++K + L +  AGTDT ++ + W MT L++ P +L K + E+ + +  KG+  + E D+  LPY +A++KET R+ P +PLL+
Sbjct:  126 IRKMGMNHLFSPTRVATFKHVREEEARRMMDKINKAADKSEVVDISELMLTFTNSVVCRQAFGKKYNEDGEEMKR-FIKILYGTQSVLGKIFFSDFFPYCGFLDDLSGLTAYMKECFERQDTYIQEVVNETLDPKRVKPETES--MIDLLMGIYKEQPFASEFTVDNVKAVILDIVVAGTDTAAAAVVWGMTYLMKYPQVLKKAQAEVREYMKEKGSTFVTEDDVKNLPYFRALVKETLRIEPVIPLLI 371          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C7D95_MENGR (Cytochrome P450 71D95 OS=Mentha gracilis GN=CYP71D95 PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.518e-21
Identity = 66/250 (26.40%), Postives = 125/250 (50.00%), Query Frame = 1
Query:    7 DTVENLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFGTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLDLQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTESKDMLDALLKICEDKSVEIDI--NDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHPAVPLL 750
            D    +RKIC S   S+R + +   +R+ ++  LL ++Q +  AG  + + +     T ++I    F   + D       E  +     +  A    L+D FP  + L+L    +       + +D     I +  K ++  +F   +D++D L ++ +D  +++ I  N IK      F+AGT+T+S+T  W M EL+RNP +++K + E+   +     ++  D+  L Y+++V+KET R+HP +PL+
Sbjct:  125 DHWRQMRKICVSELLSARNVRSFGFIRQDEMSRLLRHLQSS--AGETVDMTERIATLTCSIICRAAFGAIINDH-----EELVELVKDSLSMASGFELADLFPSSKLLNLLCWNKSKLWRMRRRVDTILEAIVEEHKLKKSGEFG-GEDIIDVLFRMQKDSQIKVPITTNAIKAFIFDTFSAGTETSSTTTLWVMAELMRNPAVMAKAQAEVRAALKGKTSVDVDDVQELKYMKSVVKETMRMHPPIPLI 366          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C78AB_ORYSJ (Cytochrome P450 78A11 OS=Oryza sativa subsp. japonica GN=CYP78A11 PE=1 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 3.518e-21
Identity = 74/251 (29.48%), Postives = 125/251 (49.80%), Query Frame = 1
Query:   22 LRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFGTTLNLISNTIFS--IDLADPTSKTAREFKQTNWGMMEEA----GKPNLSDFFPVLENL-DLQGIRRRMTVYFGKMLDVFDRLI-DQRLKQRQERDFTESKDMLDALLKICEDKSVEIDINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHPAVPLL 750
            LR+I ++H FS R++ A++  R+     +L+ +     A  A+ +        LN I  ++F    D++  +   A E +Q    M+ E     G  N SD  P L +L D   + RR      ++      +I D RL++       ++ D +D LL +   +++  D  D+  +   +   GTDTT+   EW M E++RNP + +++R E++  +G      + D+ R+PYLQAV+KET R HP  PLL
Sbjct:  171 LRRIASTHLFSPRRVAAHEPGRQADATAMLSAMAAEQSATGAVVLRPHLQAAALNNIMGSVFGRRYDVSSSSGAAADEAEQLK-SMVREGFELLGAFNWSDHLPWLAHLYDPNHVARRCAALVPRVQAFVRGVIRDHRLRRDSSSTAADNADFVDVLLSLEAHENLAED--DMVAVLWEMIFRGTDTTALVTEWCMAEVVRNPAVQARLRAEVDAAVGGDGCPSDGDVARMPYLQAVVKETLRAHPPGPLL 418          
The following BLAST results are available for this feature:
BLAST of CX297693 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 219
Match NameE-valueIdentityDescription
C71BS_ARATH9.258e-2227.41Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=C... [more]
C71BY_ARATH1.209e-2128.68Cytochrome P450 71B37 OS=Arabidopsis thaliana GN=C... [more]
C71BH_ARATH1.209e-2126.95Cytochrome P450 71B17 OS=Arabidopsis thaliana GN=C... [more]
C71B2_ARATH1.209e-2127.06Cytochrome P450 71B2 OS=Arabidopsis thaliana GN=CY... [more]
C71AM_ARATH1.579e-2127.95Cytochrome P450 71A22 OS=Arabidopsis thaliana GN=C... [more]
C71BP_ARATH2.062e-2127.80Cytochrome P450 71B25 OS=Arabidopsis thaliana GN=C... [more]
C71C4_MAIZE2.694e-2127.65Cytochrome P450 71C4 OS=Zea mays GN=CYP71C4 PE=2 S... [more]
C83A1_ARATH3.518e-2126.51Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CY... [more]
C7D95_MENGR3.518e-2126.40Cytochrome P450 71D95 OS=Mentha gracilis GN=CYP71D... [more]
C78AB_ORYSJ3.518e-2129.48Cytochrome P450 78A11 OS=Oryza sativa subsp. japon... [more]

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Properties
Property NameValue
Genbank descriptionC06004C03SK RindPdig24 Citrus clementina cDNA clone C06004C03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX297693 ID=CX297693; Name=CX297693; organism=Citrus clementina; type=EST; length=754bp
GAGGGCGACACTGTGGAGAATCTTCGAAAAATATGCAACTCACATGCTTT
CTCTAGTCGCCAACTCGATGCCAATCAGCACCTTCGGCGTAAGAAAATCC
AAGATCTTCTAGCTTATGTCCAAGAAAATTGCCGTGCAGGTACAGCAATA
CATATTGGCCAAGCTGCTTTCGGCACTACGCTTAATTTGATATCCAACAC
AATTTTTTCTATTGACTTGGCTGATCCCACATCAAAAACTGCGCGAGAGT
TTAAGCAAACAAATTGGGGTATGATGGAAGAAGCTGGAAAGCCTAACTTG
TCCGATTTTTTTCCTGTGCTTGAGAATCTTGACTTGCAAGGTATAAGGCG
TCGCATGACAGTTTATTTTGGCAAGATGCTCGATGTATTTGATCGCTTGA
TTGATCAACGATTGAAGCAAAGACAAGAACGAGATTTCACCGAATCCAAA
GATATGTTAGATGCTCTTCTCAAAATTTGTGAAGACAAAAGCGTGGAGAT
TGATATAAATGATATCAAACACTTGTTTCTGGTTTTGTTTGCTGCGGGGA
CTGATACTACTTCGAGTACATTGGAATGGGCAATGACAGAACTACTTCGC
AACCCAGATATTTTATCAAAAGTCCGATTAGAGTTAGAACAAACGATTGG
CAAAGGCAATCCAATTGAGGAATCAGACATCACCCGCTTACCTTATCTAC
AAGCAGTACTCAAAGAAACCTTCAGGTTGCACCCGGCAGTTCCTCTTTTA
CTTC
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