CX297693

Overview
NameCX297693
Unique NameCX297693
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length754
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C81D1_ARATH (Cytochrome P450 81D1 OS=Arabidopsis thaliana GN=CYP81D1 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 6.001e-21
Identity = 72/255 (28.24%), Postives = 123/255 (48.24%), Query Frame = 1
Query:    4 GDTVENLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAG-TAIHIGQAAFGTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMME---EAGKPNLSDFFPVLENLDLQGIRRRMTVYFGKMLDVF-DRLIDQRLKQRQERDFTESKDMLDALLKICEDKSVEIDINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHPAVPLLL 753
            GD   NLR++C    FS+ +L+   ++R  +++ L++ +        T + +       T N I   +         +    E K+    + +        N  D+ P+L        R +     G+  D F   LID +  Q++         M+D LL + +          IK + L++  AGT+T++ TLEWA++ LL +PD++SK R E++  +G    IEE+D++ LPYL+ ++ ET RLHPA PLL+
Sbjct:  129 GDHWRNLRRLCTIEIFSTHRLNCFLYVRTDEVRRLISRLSRLAGTKKTVVELKPMLMDLTFNNIMRMMTGKRYYGEETTDEEEAKRVRKLVADVGANTSSGNAVDYVPILRLFSSYENRVKK---LGEETDKFLQGLIDDKRGQQET-----GTTMIDHLLVLQKSDIEYYTDQIIKGIILIMVIAGTNTSAVTLEWALSNLLNHPDVISKARDEIDNRVGLDRLIEEADLSELPYLKNIVLETLRLHPATPLLV 375          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C7D95_MENSP (Cytochrome P450 71D95 OS=Mentha spicata GN=CYP71D95 PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 6.001e-21
Identity = 66/250 (26.40%), Postives = 124/250 (49.60%), Query Frame = 1
Query:    7 DTVENLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFGTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLDLQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTESKDMLDALLKICEDKSVEIDI--NDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHPAVPLL 750
            D    +RKIC S   S+R + +   +R+ ++  LL ++Q +  AG  + + +     T ++I    F   + D       E  +     +  A    L+D FP  + L+L    +       + +D     I    K ++  +F   +D++D L ++ +D  +++ I  N IK      F+AGT+T+S+T  W M EL+RNP +++K + E+   +     ++  D+  L Y+++V+KET R+HP +PL+
Sbjct:  125 DHWRQMRKICVSELLSARNVRSFGFIRQDEMSRLLRHLQSS--AGETVDMTERIATLTCSIICRAAFGAIINDH-----EELVELVKDSLSMASGFELADLFPSSKLLNLLCWNKSKLWRMRRRVDTILEAIVDEHKLKKSGEFG-GEDIIDVLFRMQKDSQIKVPITTNAIKAFIFDTFSAGTETSSTTTLWVMAELMRNPAVMAKAQAEVRAALKGKTSVDVDDVQELKYMKSVVKETMRMHPPIPLI 366          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C71AN_ARATH (Cytochrome P450 71A23 OS=Arabidopsis thaliana GN=CYP71A23 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 6.001e-21
Identity = 73/254 (28.74%), Postives = 135/254 (53.15%), Query Frame = 1
Query:    4 GDTVENLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFGTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLD-LQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTESKDMLDALLKICEDKSVEIDIN--DIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKG-NPIEESDITRLPYLQAVLKETFRLHPAVPLLL 753
            G+    ++ +   H  S++ + + Q +R+++I  ++  ++++  +   +++ +     T ++I            T     +FK+    +M + G   +  + P L   D + G+  R+     K  + FD+L+++ ++  ++ D  +  D +D LL    DKS   DI+   IK + L  F  GTDT+S+ +EW MTELLR+P  L K++ E+ +TI KG + + E DI  + YL+AV+KE  RLHP VPL++
Sbjct:  118 GEYWRQMKSVSVLHLLSNKMVRSFQDVRQEEITLMMETIRKS--SSKPVNLSKILSSLTNDVICRVALGRKYGVGT-----DFKELIDRLMRQLGTFTIGSYVPWLAWTDWVSGLEARLE----KTANDFDKLLERIVQDHEDGD-GDKTDFVDVLLAAQRDKSFGFDIDRLSIKAIVLDAFVGGTDTSSTLVEWEMTELLRHPTCLKKLQEEV-RTICKGKSSVSEDDIQGMEYLKAVVKEALRLHPPVPLMV 358          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C83B1_ARATH (Cytochrome P450 83B1 OS=Arabidopsis thaliana GN=CYP83B1 PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 7.837e-21
Identity = 66/247 (26.72%), Postives = 123/247 (49.80%), Query Frame = 1
Query:   22 LRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFGTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLD-LQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTESKDMLDALLKICEDK--SVEIDINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHPAVPLLL 753
            +RK+C  + FS  ++ + + +R ++ Q ++  + +       + + +     T  ++    F     +  ++  R F    +      G    SD FP    LD L G+  R+   F ++      L+D+ L   + +  TES   +D L++I +D+  S++    ++K + L +   GTDT ++ + WAMT L++ P+ + K + E+   IG    + E DI  LPYL+AV+KE+ RL P +P+LL
Sbjct:  125 MRKMCMVNLFSPNRVASFRPVREEECQRMMDKIYKAADQSGTVDLSELLLSFTNCVVCRQAFGKRYNEYGTEMKR-FIDILYETQALLGTLFFSDLFPYFGFLDNLTGLSARLKKAFKELDTYLQELLDETLDPNRPKQETES--FIDLLMQIYKDQPFSIKFTHENVKAMILDIVVPGTDTAAAVVVWAMTYLIKYPEAMKKAQDEVRSVIGDKGYVSEEDIPNLPYLKAVIKESLRLEPVIPILL 368          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C71B7_ARATH (Cytochrome P450 71B7 OS=Arabidopsis thaliana GN=CYP71B7 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 7.837e-21
Identity = 66/265 (24.91%), Postives = 136/265 (51.32%), Query Frame = 1
Query:    4 GDTVENLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFGTTLNLISNTIFSIDL-------ADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENL--DLQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTESKDMLDALLKIC-----EDKSVEIDINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIG-KGNPIEESDITRLPYLQAVLKETFRLHPAVPLLL 753
            G+  + LRK+      ++++  + +++R ++   L+  + E+    + +++ +  F    +++    F +++        D  +    +F+    G+         +DFFP +  L   + G  + +   F ++   F  ++D  +K    R  +E+ D++D +L +      + +S ++  + +K +   +F AG +T++ TL WAM EL+RNP ++ KV+ E+  T+G K   I E D++++ Y + V+KE FRLHPA PLLL
Sbjct:  121 GEEWKALRKLVVMELLNTKKFQSFRYIREEENDLLIKKLTESALKKSPVNLKKTLFTLVASIVCRLAFGVNIHKCEFVDEDNVADLVNKFEMLVAGVA-------FTDFFPGVGWLVDRISGQNKTLNNVFSELDTFFQNVLDDHIKPG--RQVSENPDVVDVMLDLMKKQEKDGESFKLTTDHLKGIISDIFLAGVNTSAVTLNWAMAELIRNPRVMKKVQDEIRTTLGDKKQRITEQDLSQVHYFKLVVKEIFRLHPAAPLLL 376          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C71AI_ARATH (Cytochrome P450 71A18 OS=Arabidopsis thaliana GN=CYP71A18 PE=2 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 7.837e-21
Identity = 63/254 (24.80%), Postives = 137/254 (53.94%), Query Frame = 1
Query:    4 GDTVENLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFGTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLD-LQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTESKDMLDALLKICEDKS--VEIDINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTI-GKGNPIEESDITRLPYLQAVLKETFRLHPAVPLLL 753
            G+    ++ +C  +  +++ + + + +R +++  ++  +++   + +A ++ +     T ++ S    S+       +TA   K+    +ME   +  + D+ P L  +D + G   ++        D+ ++++ + L+  + +      D ++ LL I ++K+   ++  NDIK + L +F  G  T+S+ LEW MTEL+RNP+ + K++ E+  TI   G+ I+E ++  + YL+AV+KE FR+HP +PL+L
Sbjct:  122 GEYWRQMKSVCILNLLTNKMVASFEKVREEEVNAMMEKLEKASCSSSAENLSELFVTLTSDVTSRV--SLGKKYWEDETAGGLKKRVRQIMELLREFPIGDYVPALAWIDRINGFNSKIVEVSRAYSDLMEKVVQEHLEAGEHK-----ADFVNILLSIEKEKNNGFKVQRNDIKFMILDMFIGGISTSSTLLEWIMTELIRNPECMKKLQNEIRSTIRPHGSYIKEKEVENMRYLKAVIKEVFRVHPPLPLIL 368          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C82A1_PEA (Cytochrome P450 82A1 (Fragment) OS=Pisum sativum GN=CYP82A1 PE=2 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 1.024e-20
Identity = 68/202 (33.66%), Postives = 106/202 (52.48%), Query Frame = 1
Query:  178 TLNLISNTIFSI----DLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLDLQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTES-------KDMLDALLKICEDKSVE-IDINDI-KHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHPAVP 744
            TLN++   +       D+     + A+ F +     M   G   + D  P L+ LDL G  + M     K    FD ++++ L++ +E+    S       +D +DA+L + +DK +E  D++ I K   L L   G+DTT+ TL WAM  LL++P +L K++ EL   IGK   + ESDI +L YL A++KET RL+P  P
Sbjct:  209 TLNMVLRMVVGKRCFGDVDVENKEEAKRFLENIRDFMRLIGTFTVGDGVPFLKWLDLGGHEKEMK----KCAKKFDVMLNEWLEEHREKKGLGSEDKVVGERDFMDAMLLVLKDKPIEGFDVDTIIKATTLELILGGSDTTAGTLTWAMCLLLKHPHVLEKLKEELNTYIGKERCVNESDINKLVYLHAIIKETLRLYPPAP 406          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C79B2_ARATH (Tryptophan N-hydroxylase 1 OS=Arabidopsis thaliana GN=CYP79B2 PE=1 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 1.024e-20
Identity = 53/147 (36.05%), Postives = 86/147 (58.50%), Query Frame = 1
Query:  298 LSDFFPVLENLDLQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTESKDMLDALLKICEDKSVEI-DINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHP 735
            +SD+ P+L  LDL G  + M      M    D +ID+R+K  +E   T+ +D LD  + I +++   +   ++IK     L  A  D  S+ +EWAM E++  P+IL K   E+++ +GK   ++ESDI +L Y++A+L+E FRLHP
Sbjct:  253 ISDYLPMLTGLDLNGHEKIMRESSAIMDKYHDPIIDERIKMWREGKRTQIEDFLDIFISIKDEQGNPLLTADEIKPTIKELVMAAPDNPSNAVEWAMAEMVNKPEILRKAMEEIDRVVGKERLVQESDIPKLNYVKAILREAFRLHP 399          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C71DB_LOTJA (Cytochrome P450 71D11 (Fragment) OS=Lotus japonicus GN=CYP71D11 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.024e-20
Identity = 69/258 (26.74%), Postives = 129/258 (50.00%), Query Frame = 1
Query:    4 GDTVENLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFGTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLD-LQGIRRRMTVYFGKMLDVFDRLIDQ-----RLKQRQERDFTESKDMLDALLKI---CEDKSVEIDINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHPAVPLL 750
            GD    +RKICN    S +++ +   +R +++++L+  +      G+ +++ QA       + S + F     +       EF      +M+ AG  N++D FP  + L+ L  +R +      KM  + + +ID      R K+ Q     E  D++D LLK      D+   + I +IK +   +F AG++T+++T+ W M E++++P +L K + E+ +   +   ++E+ I  L YL+A + E  RLHP  PL+
Sbjct:  109 GDYWRQVRKICNVELLSMKRVQSLWPIREEEVKNLIQRIASE--EGSVVNLSQAIDSLIFTITSRSAFGKRYMEQ-----EEFISCVREVMKLAGGFNIADLFPSAKWLENLTRMRSKFEYLHQKMDRILETIIDDHKANSRTKEGQVEGGEE--DLIDVLLKYENSSTDQDFHLTIRNIKAILFDIFIAGSETSATTINWTMAEMMKDPILLKKAQDEVREIFQRRGKVDETCIYELKYLKAFINEVLRLHPPGPLV 357          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C71A2_SOLME (Cytochrome P450 71A2 OS=Solanum melongena GN=CYP71A2 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.024e-20
Identity = 71/257 (27.63%), Postives = 135/257 (52.53%), Query Frame = 1
Query:    4 GDTVENLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFGTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLD-LQGIRRRMTVYFGKMLDVF-DRLIDQRLKQRQERDFT---ESKDMLDALLKICEDKSVEIDI--NDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHPAVPLLL 753
            G+     + I   H  S+ ++ + +++R ++  +++  +++ C + + I++G+     T N+IS         +  S      +Q     +E  G  N+ D+ P LE ++   G+  ++     K LD+F + +I++ + ++++ ++T   E+KD +D LL+I      +  +  + +K + L  FAAGTDTT +TL+W M ELLR P  L  ++ E+       + I E D+  + YL+AV+KE+ RLHP    LL
Sbjct:  126 GEYWRRAKSITVLHLLSNTRVQSYRNVRAEETANMIGKIRQGCDS-SVINLGEHLCSLTNNIISRVALGRTYDEKESGIEHIIEQ----FVELLGIFNVGDYIPRLEWVNKFTGLDAKVKKV-AKELDMFLEIVIEEHIIRKKKEEYTSTGEAKDFVDVLLEIQNGNETDFPLQRDSLKAILLDSFAAGTDTTFATLDWTMAELLRQPRALKTLQDEVRGLAQGKSEITEDDLKNMQYLRAVIKESLRLHPTQESLL 376          
The following BLAST results are available for this feature:
BLAST of CX297693 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 219
Match NameE-valueIdentityDescription
C81D1_ARATH6.001e-2128.24Cytochrome P450 81D1 OS=Arabidopsis thaliana GN=CY... [more]
C7D95_MENSP6.001e-2126.40Cytochrome P450 71D95 OS=Mentha spicata GN=CYP71D9... [more]
C71AN_ARATH6.001e-2128.74Cytochrome P450 71A23 OS=Arabidopsis thaliana GN=C... [more]
C83B1_ARATH7.837e-2126.72Cytochrome P450 83B1 OS=Arabidopsis thaliana GN=CY... [more]
C71B7_ARATH7.837e-2124.91Cytochrome P450 71B7 OS=Arabidopsis thaliana GN=CY... [more]
C71AI_ARATH7.837e-2124.80Cytochrome P450 71A18 OS=Arabidopsis thaliana GN=C... [more]
C82A1_PEA1.024e-2033.66Cytochrome P450 82A1 (Fragment) OS=Pisum sativum G... [more]
C79B2_ARATH1.024e-2036.05Tryptophan N-hydroxylase 1 OS=Arabidopsis thaliana... [more]
C71DB_LOTJA1.024e-2026.74Cytochrome P450 71D11 (Fragment) OS=Lotus japonicu... [more]
C71A2_SOLME1.024e-2027.63Cytochrome P450 71A2 OS=Solanum melongena GN=CYP71... [more]

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Properties
Property NameValue
Genbank descriptionC06004C03SK RindPdig24 Citrus clementina cDNA clone C06004C03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX297693 ID=CX297693; Name=CX297693; organism=Citrus clementina; type=EST; length=754bp
GAGGGCGACACTGTGGAGAATCTTCGAAAAATATGCAACTCACATGCTTT
CTCTAGTCGCCAACTCGATGCCAATCAGCACCTTCGGCGTAAGAAAATCC
AAGATCTTCTAGCTTATGTCCAAGAAAATTGCCGTGCAGGTACAGCAATA
CATATTGGCCAAGCTGCTTTCGGCACTACGCTTAATTTGATATCCAACAC
AATTTTTTCTATTGACTTGGCTGATCCCACATCAAAAACTGCGCGAGAGT
TTAAGCAAACAAATTGGGGTATGATGGAAGAAGCTGGAAAGCCTAACTTG
TCCGATTTTTTTCCTGTGCTTGAGAATCTTGACTTGCAAGGTATAAGGCG
TCGCATGACAGTTTATTTTGGCAAGATGCTCGATGTATTTGATCGCTTGA
TTGATCAACGATTGAAGCAAAGACAAGAACGAGATTTCACCGAATCCAAA
GATATGTTAGATGCTCTTCTCAAAATTTGTGAAGACAAAAGCGTGGAGAT
TGATATAAATGATATCAAACACTTGTTTCTGGTTTTGTTTGCTGCGGGGA
CTGATACTACTTCGAGTACATTGGAATGGGCAATGACAGAACTACTTCGC
AACCCAGATATTTTATCAAAAGTCCGATTAGAGTTAGAACAAACGATTGG
CAAAGGCAATCCAATTGAGGAATCAGACATCACCCGCTTACCTTATCTAC
AAGCAGTACTCAAAGAAACCTTCAGGTTGCACCCGGCAGTTCCTCTTTTA
CTTC
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