CX297693

Overview
NameCX297693
Unique NameCX297693
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length754
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C71AQ_ARATH (Cytochrome P450 71A26 OS=Arabidopsis thaliana GN=CYP71A26 PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.337e-20
Identity = 66/253 (26.09%), Postives = 131/253 (51.78%), Query Frame = 1
Query:    4 GDTVENLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFGTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLD-LQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTESKDMLDALLKICEDKSVEIDIN--DIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHPAVPLLL 753
            G+    ++ +C  H FS++ + + + +R ++I  ++  ++++      +++ +     T ++I            T     +FK+    + +  G  ++  + P L  +D ++G+  ++      +   F+R++   +     RD T   D +D LL I  DK+V  +IN   IK + + +F  GTDT+S+ +EWAMTELLR+P  L +++ E+       + + E +I  + YL+AV+KE  RLHP +PL++
Sbjct:  120 GEYWRQMKSVCVLHLFSNKMVRSFREVREEEISLMMEKIRKSI--SLPVNLSKILVSLTNDVICKVALGRKYGGET-----DFKELMERLNKLLGTFSVGSYVPWLAWIDWIRGLDCQLEKTANDVDKFFERVVQDHVDGN--RDMT---DFVDVLLAIQRDKTVGFEINRVSIKAIVMNVFVGGTDTSSTLMEWAMTELLRHPKCLKRLQEEVRTICKDKSSVSEEEIQNMSYLKAVIKEALRLHPPLPLMV 360          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C71AG_ARATH (Cytochrome P450 71A16 OS=Arabidopsis thaliana GN=CYP71A16 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.337e-20
Identity = 65/258 (25.19%), Postives = 132/258 (51.16%), Query Frame = 1
Query:    4 GDTVENLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFGTTLNLISNTIFSIDLADPTS--KTAREFKQTNWGMMEEAGKPNLSDFFPVLENLDLQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFT----ESKDMLDALLKICEDKSVE--IDINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHPAVPLLL 753
            G+   N++ +C  H  S++ + +++  R ++I  L+  ++E   + +++++ +       N++S+ +  + L    S  +   + K      ++  G   + ++ P L  +       ++T   GK+  +  +  D   K  QE + T    E+ D +D LL I  D++ +  +D +D+K +   +F   T TTS+ +EWAMT L+RNP+ L K++ E+       + +   ++  + YL+AV+KE  RLHP +PLL+
Sbjct:  121 GEYWRNVKSLCTIHLLSNKMVQSSEKRREEEITLLMETLEEASLSSSSVNLSKLI----TNMVSDIMGKVVLGKKYSGEEGTIDVKTITKSFLDAVGLSPVGEYIPSLAWIG------KITGSDGKLEKITKQFGDFIEKVLQEHEDTTADKETPDFVDMLLTIQRDETAQCQLDKSDLKVIIFEMFLGSTTTTSAVIEWAMTRLMRNPECLKKLQDEIRSVSKMNSYVSGKEVENMNYLKAVIKEVLRLHPPLPLLV 368          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C79B1_SINAL (Cytochrome P450 79B1 OS=Sinapis alba GN=CYP79B1 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.746e-20
Identity = 53/147 (36.05%), Postives = 85/147 (57.82%), Query Frame = 1
Query:  298 LSDFFPVLENLDLQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTESKDMLDALLKICEDKSVEI-DINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHP 735
            +SD+ P+L  LDL G  + M      M    D +ID R+K  +E   T+ +D LD  + I +++   +   ++IK     L  A  D  S+ +EWAM E++  P+IL K   E+++ +GK   ++ESDI +L Y++A+L+E FRLHP
Sbjct:  254 ISDYLPILTGLDLNGHEKIMRDSSAIMDKYHDPIIDARIKMWREGKKTQIEDFLDIFISIKDEEGNPLLTADEIKPTIKELVMAAPDNPSNAVEWAMAEMVNKPEILRKAMEEIDRVVGKERLVQESDIPKLNYVKAILREAFRLHP 400          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C71C2_MAIZE (Cytochrome P450 71C2 OS=Zea mays GN=CYP71C2 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.280e-20
Identity = 70/257 (27.24%), Postives = 135/257 (52.53%), Query Frame = 1
Query:   25 RKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAG--TAIHIGQAAFGTTLNLISNTIFSIDLADP-TSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLDLQGIRRRMTVYFGKML-----DVFDRLIDQRLKQRQERDFTESK-DMLDALLKICEDKSVEIDINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIG-----KGNPIEESDITRLPYLQAVLKETFRLHPAVPLLL 753
            RK+  +H  S++++ + +H R+++++ ++  ++    A    A+ +     G T +++S  +      +   ++   E  + N  ++  AG  NL D+FP   N+ +  +  R+     + L     DVFD LI + ++ R   +  ES+ D +  LL I ++  +  D  ++K + + +F AG +T+  TLE+ M EL+ N  ++ K++ E+  T+G     K + + E D+  +PYL+A +KET RLHP  P LL
Sbjct:  157 RKLLTTHMLSTKKVQSFRHGRQEEVRLVMDKIRAAATAAPPAAVDLSDLLSGYTNDVVSRAVLGASHRNQGRNRLFSELTEINVSLL--AGF-NLEDYFP--PNMAMADVLLRLVSVKARRLNQRWNDVFDELIQEHVQSRPSGESEESEADFIHVLLSIQQEYGLTTD--NLKAILVDMFEAGIETSYLTLEYGMAELINNRHVMEKLQTEVRTTMGSPDGKKLDMLAEEDLGSMPYLKATIKETLRLHPPAPFLL 406          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C71A3_SOLME (Cytochrome P450 71A3 (Fragment) OS=Solanum melongena GN=CYP71A3 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.280e-20
Identity = 75/257 (29.18%), Postives = 127/257 (49.42%), Query Frame = 1
Query:    4 GDTVENLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGT-AIHIGQAAFGTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLD-LQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFT---ESKDMLDALLKICEDKSVEIDI--NDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHPAVPLLL 753
            G+    +R I   H  S++++ + +  R ++  +++  +++   + + A  +         N+I+         D     A   K      +E  G  N+ D+ P LE ++ + G   ++     K LD F   + +    R E++     ESKD++D LL+I   K     I  + +K L L  F+AGTDT  + LEW MTELLR+P  + K++ E++    +   I E D+  + YL+AV+KET RLHP +PLLL
Sbjct:  114 GEYWRQIRSITVLHLLSNKRVQSYRAAREEETSNMIEKLKQMSNSSSSATDLRDLFCWLAYNIINRVALGKKYNDEIDAKATLDK-----FVELLGTFNVGDYIPCLEWVNKITGFDSKVDKV-AKDLDTFLEFVIEAHMIRNEKEENRAGESKDLVDVLLEIQNGKETGFPIQRDSLKALLLDPFSAGTDTIYTVLEWTMTELLRHPRAMEKLQNEVQGLAQEKAEITEDDLPNMHYLKAVIKETLRLHPPIPLLL 364          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C71DF_MENPI (Cytochrome P450 71D15 OS=Mentha piperita GN=CYP71D15 PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.890e-20
Identity = 65/245 (26.53%), Postives = 123/245 (50.20%), Query Frame = 1
Query:   22 LRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFGTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLDLQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTESKDMLDALLKICEDKSVEIDI--NDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHPAVPLL 750
            +RKIC S   SSR + +   +R+ ++  LL +++ +  AG A+ + +     T ++I    F   + D       E        +  A    L+D FP  + L+L    +       + +D     I    K ++  +F   +D++D L ++ +D  +++ I  N IK      F+AGT+T+S+T  W + EL+RNP +++K + E+   + +    +  D+  L Y+++V+KET R+HP +PL+
Sbjct:  131 MRKICVSELLSSRNVRSFGFIRQDEVSRLLRHLRSS--AGAAVDMTERIETLTCSIICRAAFGSVIRDNA-----ELVGLVKDALSMASGFELADMFPSSKLLNLLCWNKSKLWRMRRRVDTILEAIVDEHKFKKSGEFG-GEDIIDVLFRMQKDTQIKVPITTNSIKAFIFDTFSAGTETSSTTTLWVLAELMRNPAVMAKAQAEVRAALKEKTNWDVDDVQELKYMKSVVKETMRMHPPIPLI 367          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C71E1_SORBI (4-hydroxyphenylacetaldehyde oxime monooxygenase OS=Sorghum bicolor GN=CYP71E1 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 5.080e-20
Identity = 67/256 (26.17%), Postives = 116/256 (45.31%), Query Frame = 1
Query:    4 GDTVENLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFGTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENL---DLQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTESKDMLDALLKICE--DKSVEIDINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNP-IEESDITRLPYLQAVLKETFRLHPAVPLLL 753
            G+    +RK+      S R++ A  + R +++  L+A +     +  +I +    F  T  +I    F    A         F+      M+     +  DFFP         L G   R    F ++   F+++IDQ +   +        D++D L+ +C+  D ++    + +K + L  F    DT+S T+ WAM+EL+R P +L K + E+   +G   P +   D  ++PYL+ V+KET RLHP   LL+
Sbjct:  144 GEYWREMRKLFALELLSMRRVKAACYAREQEMDRLVADLDRAAASKASIVLNDHVFALTDGIIGTVAFGNIYASKQFAHKERFQHVLDDAMDMMASFSAEDFFPNAAGRLADRLSGFLARRERIFNELDVFFEKVIDQHMDPARPVP-DNGGDLVDVLINLCKEHDGTLRFTRDHVKAIVLDTFIGAIDTSSVTILWAMSELMRKPQVLRKAQAEVRAAVGDDKPRVNSEDAAKIPYLKMVVKETLRLHPPATLLV 398          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C71B5_ARATH (Cytochrome P450 71B5 OS=Arabidopsis thaliana GN=CYP71B5 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 5.080e-20
Identity = 74/259 (28.57%), Postives = 129/259 (49.81%), Query Frame = 1
Query:    4 GDTVENLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENC--RAGTAIHIGQAAFGTTLNLISNTIFSIDLADPTS-KTAREF---KQTNWGMMEEAGKPNLSDFFPVLENLD-LQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTESKD-MLDALLKICEDKSVEIDINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKG-NPIEESDITRLPYLQAVLKETFRLHPAVPLLL 753
            G+    +RKI  S  FS ++L + +++R  + Q L+  V ++      +++++ +  F    ++I    F  +  D    +T  E     +TN G +  A      DF P    +D + G    +   F K+ + F+ +ID  LK  +  D ++    MLD + K  E  S ++  + +K L   +F AG +  S T+ W MTEL R+P ++ K++ E+   +G     I E D+ ++ YL+ V++E FRLHP  PLLL
Sbjct:  117 GENWREMRKIAVSELFSQKKLKSFRYIREDESQLLVRKVSKSALETPTSSVNLRKVIFTFAASIICRLSFGQNFCDFVDMETVEELVLESETNLGSLAFA------DFLPAGWIIDRISGQHSTVMKAFSKLTNFFELVIDDHLKSGKIEDHSDIISVMLDMINKPTEVGSYKVTDDHLKGLMSDVFLAGVNAGSITMIWTMTELSRHPRVMRKLQEEIRAALGPNKEKITEEDLEKVEYLKMVIEEAFRLHPPAPLLL 369          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C71AP_ARATH (Cytochrome P450 71A25 OS=Arabidopsis thaliana GN=CYP71A25 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 5.080e-20
Identity = 70/252 (27.78%), Postives = 132/252 (52.38%), Query Frame = 1
Query:    4 GDTVENLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFGTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLDLQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTESKDMLDALLKICEDKS--VEIDINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKG-NPIEESDITRLPYLQAVLKETFRLHPAVPLL 750
            G+    ++ +C  H  S++ + + + +R ++I  ++A ++++  +    ++ +     T ++I            T     +FK+    + E  G  ++  F P L  +D     R       KM    D   ++ ++  ++ D  +  D++DALL++  +KS   EI+   IK + L +F  G+DT+ + LEWAMTELLR+P  L++++ E+ +TI KG + + E DI  + YL+AV+KE  RLHP  P++
Sbjct:  119 GEYWRQMKSVCVIHLLSNKMVRSFRDVREEEITLMMAKIRKS--SSLPFNVSKVLECLTNDVICRVALGRKYGGET-----DFKKLTDRLSELLGTFSIGSFVPWLAWVDWI---RGWDAQLDKMGKDLDDFFEKVVQDHEDGDRRDGTDLIDALLRVKREKSPGFEIERVSIKAITLDVFVGGSDTSFTLLEWAMTELLRHPKSLNRLQEEV-RTICKGKSRVSEDDIQGMKYLKAVIKEALRLHPPFPMM 359          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C79B3_ARATH (Tryptophan N-hydroxylase 2 OS=Arabidopsis thaliana GN=CYP79B3 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 6.635e-20
Identity = 51/147 (34.69%), Postives = 85/147 (57.82%), Query Frame = 1
Query:  298 LSDFFPVLENLDLQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTESKDMLDALLKICEDKSVEI-DINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHP 735
            +SD+ P+L  LDL G  + M      M    D +ID+R+K  +E   T+ +D LD  + I ++    +   ++IK     L  A  D  S+ +EWA+ E++  P+IL K   E+++ +GK   ++ESDI +L Y++A+++E FRLHP
Sbjct:  255 ISDYLPMLTGLDLNGHEKIMRESSAIMDKYHDPIIDERIKMWREGKRTQIEDFLDIFISIKDEAGQPLLTADEIKPTIKELVMAAPDNPSNAVEWAIAEMINKPEILHKAMEEIDRVVGKERFVQESDIPKLNYVKAIIREAFRLHP 401          
The following BLAST results are available for this feature:
BLAST of CX297693 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 219
Match NameE-valueIdentityDescription
C71AQ_ARATH1.337e-2026.09Cytochrome P450 71A26 OS=Arabidopsis thaliana GN=C... [more]
C71AG_ARATH1.337e-2025.19Cytochrome P450 71A16 OS=Arabidopsis thaliana GN=C... [more]
C79B1_SINAL1.746e-2036.05Cytochrome P450 79B1 OS=Sinapis alba GN=CYP79B1 PE... [more]
C71C2_MAIZE2.280e-2027.24Cytochrome P450 71C2 OS=Zea mays GN=CYP71C2 PE=2 S... [more]
C71A3_SOLME2.280e-2029.18Cytochrome P450 71A3 (Fragment) OS=Solanum melonge... [more]
C71DF_MENPI3.890e-2026.53Cytochrome P450 71D15 OS=Mentha piperita GN=CYP71D... [more]
C71E1_SORBI5.080e-2026.174-hydroxyphenylacetaldehyde oxime monooxygenase OS... [more]
C71B5_ARATH5.080e-2028.57Cytochrome P450 71B5 OS=Arabidopsis thaliana GN=CY... [more]
C71AP_ARATH5.080e-2027.78Cytochrome P450 71A25 OS=Arabidopsis thaliana GN=C... [more]
C79B3_ARATH6.635e-2034.69Tryptophan N-hydroxylase 2 OS=Arabidopsis thaliana... [more]

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Properties
Property NameValue
Genbank descriptionC06004C03SK RindPdig24 Citrus clementina cDNA clone C06004C03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX297693 ID=CX297693; Name=CX297693; organism=Citrus clementina; type=EST; length=754bp
GAGGGCGACACTGTGGAGAATCTTCGAAAAATATGCAACTCACATGCTTT
CTCTAGTCGCCAACTCGATGCCAATCAGCACCTTCGGCGTAAGAAAATCC
AAGATCTTCTAGCTTATGTCCAAGAAAATTGCCGTGCAGGTACAGCAATA
CATATTGGCCAAGCTGCTTTCGGCACTACGCTTAATTTGATATCCAACAC
AATTTTTTCTATTGACTTGGCTGATCCCACATCAAAAACTGCGCGAGAGT
TTAAGCAAACAAATTGGGGTATGATGGAAGAAGCTGGAAAGCCTAACTTG
TCCGATTTTTTTCCTGTGCTTGAGAATCTTGACTTGCAAGGTATAAGGCG
TCGCATGACAGTTTATTTTGGCAAGATGCTCGATGTATTTGATCGCTTGA
TTGATCAACGATTGAAGCAAAGACAAGAACGAGATTTCACCGAATCCAAA
GATATGTTAGATGCTCTTCTCAAAATTTGTGAAGACAAAAGCGTGGAGAT
TGATATAAATGATATCAAACACTTGTTTCTGGTTTTGTTTGCTGCGGGGA
CTGATACTACTTCGAGTACATTGGAATGGGCAATGACAGAACTACTTCGC
AACCCAGATATTTTATCAAAAGTCCGATTAGAGTTAGAACAAACGATTGG
CAAAGGCAATCCAATTGAGGAATCAGACATCACCCGCTTACCTTATCTAC
AAGCAGTACTCAAAGAAACCTTCAGGTTGCACCCGGCAGTTCCTCTTTTA
CTTC
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