CX297693

Overview
NameCX297693
Unique NameCX297693
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length754
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C71B1_THLAR (Cytochrome P450 71B1 OS=Thlaspi arvense GN=CYP71B1 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 6.635e-20
Identity = 61/250 (24.40%), Postives = 126/250 (50.40%), Query Frame = 1
Query:   22 LRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFGTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENL--DLQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTESKDMLDALLKICEDKS----VEIDINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHPAVPLLL 753
            +RK+     ++++++ + +H+R +++   + + ++   +   +++ Q     + ++I    F I+L    SK    +++      E  G     D+FPV+  +   + G+  +    F  +   FD+ I + +     +D     D++D LLK+   +      E+     K + + +  AG DT++ T+ WAMT LL NP ++ K++ E+ + I   + I + D+ +L Y + VLKETFR+ P VP+L+
Sbjct:  124 VRKLTVVELYTAKRVQSFRHIREEEVASFVRFNKQAASSEETVNLSQKILKMSGSVICRIGFGINLEG--SKLENTYQEIIVQAFEVLGSLAAVDYFPVIGTIIDRITGLHAKCEKVFHGIDSFFDQAIQRHIDDPSIKD-----DIIDLLLKMERGEGSLGEYELTREHTKGILMNILTAGIDTSAQTMTWAMTHLLANPRVMKKLQAEIREKIKNIDEITDDDVEQLDYFKLVLKETFRISPIVPVLV 366          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C71AK_ARATH (Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=CYP71A20 PE=2 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 6.635e-20
Identity = 65/255 (25.49%), Postives = 134/255 (52.55%), Query Frame = 1
Query:    4 GDTVENLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQE-NCRAGTA-IHIGQAAFGTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLD-LQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTESKDMLDALLKICEDKS--VEIDINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHPAVPLLL 753
            G+    ++ IC  +  +++ + + + +R ++I+ ++  +++ +C +  + +++ Q     T ++I         +    K   + +          G+  + ++ P L  +D ++G+  +M V   +    FD  +++ +K+ +E D     D++D LL I  DK+   E++ + +K +   +F AGT TT S LEWAMTEL+RNP ++ K++ E+  +  +   + E +  ++ YLQAV+KE  RL P  PLL+
Sbjct:  121 GEYWRQMKSICIQNLLNNKMVRSYEKIREEEIKRMIEKLEKASCSSSPSPVNLSQILMTLTNDIICRVALGRKYSG--KKDGIDVENIVRTFAALLGEFPVGEYIPSLSWIDRIRGLDHKMEVVDKR----FDEFLERVVKEHEEADKETRSDLVDKLLTIQSDKTGQFELEKSALKLIIWDMFLAGTATTLSFLEWAMTELMRNPKVMKKLQEEIRSSSPQDLFVTEKEAEKMNYLQAVIKEALRLRPPAPLLV 369          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C71C1_MAIZE (Cytochrome P450 71C1 OS=Zea mays GN=CYP71C1 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 8.665e-20
Identity = 63/248 (25.40%), Postives = 131/248 (52.82%), Query Frame = 1
Query:   25 RKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRA--GTAIHIGQAAFGTTLNLISNTIFSID-LADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLDL--QGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTESKDMLDALLKICEDKSVEIDINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHPAVPLLL 753
            RK+ N+H  S++ + + +  R ++++ ++A +++   A  GTA+ + +   G   + +   +          +K  RE  +T+  ++   G  N+ D+FP L ++DL  + I  +      +   +F+ L+ +      ++    S+D +  LL + +D  +  D  +IK + + +F A  +T+   LE++M+EL+ N  +L+K++ E+      G  + E D++R+PYL+A +KE+ R+HP  P LL
Sbjct:  154 RKVVNTHLLSAKMVFSKRREREEEVRLVVARIRDAAEASPGTALDMTELLGGYASDFVCRAVLGESHRKQGRNKLFRELTETSAALL---GGFNVEDYFPKLADVDLFLRIICAKAKSVSKRWDSLFNELLSEYALSGGKQGDHNSEDFVHLLLSLQKDYGLTTD--NIKGILVNMFEAAIETSFLVLEYSMSELMNNRHVLAKLQKEVRTATPDGRMVMEEDLSRMPYLKATIKESMRIHPPAPFLL 396          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C82A3_SOYBN (Cytochrome P450 82A3 OS=Glycine max GN=CYP82A3 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.132e-19
Identity = 75/260 (28.85%), Postives = 124/260 (47.69%), Query Frame = 1
Query:   22 LRKICNSHAFSSRQLDANQHLRRKKIQ-------DLLAYVQENCRAGTAIHIGQAAFGTTLNLISNTI-----FSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLDLQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQER-----DFTESKDMLDALLKICEDKSV-EIDINDI-KHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHPAVP 744
            LRKI      S+R+++   H+R  +++       D+ +   +N    T + I Q     T N++   +     F +   +   K  R  K      M   G   ++D  P L  LDL G  + M     ++    D+L+ + L++ +++     +    +D +D ++       +   D + I K   L L   GTD+T+ TL WA++ LLRNP  L K + E++  IGK   I ESDI++L YLQA++KET RL+P  P
Sbjct:  135 LRKIVTFEFLSNRRIEQRNHIRVSEVRTSIKELFDIWSNGNKNESRYTLVDIKQWLAYLTFNMVVRMVVGKRYFGVMHVEGKDKAQRFMKNIR-EFMNLMGTFTVADGVPCLRWLDLGGHEKAMKANAKEV----DKLLSEWLEEHRQKKLLGENVESDRDFMDVMISALNGAQIGAFDADTICKATSLELILGGTDSTAVTLTWALSLLLRNPLALGKAKEEIDMQIGKDEYIRESDISKLVYLQAIVKETLRLYPPAP 389          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C82A2_SOYBN (Cytochrome P450 82A2 OS=Glycine max GN=CYP82A2 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.132e-19
Identity = 74/257 (28.79%), Postives = 122/257 (47.47%), Query Frame = 1
Query:   22 LRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAA-----------FGTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLDLQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTES-KDMLDALLKICEDKSVE---IDINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHPAVPL 747
            LRKI  S   S  +++   H+R  ++Q  +  +  + R+   +  G A            F   L ++    +         K  R  K  +   +  A    + D  P L   D  G    M     ++ ++    +D+    RQ+R   E+ +D++  LL + E K++E   +DI  IK   L +  AGT+ + +TL WA + +L NP +L K++ EL+  +GK   I ESD+++L YLQAV+KET RL+P  PL
Sbjct:  134 LRKILMSEFLSPSRVEQLHHVRVSEVQSSITELFRDWRSNKNVQSGFATVELKQWFSLLVFNMILRMVCGKRYFSASTSDDEKANRCVKAVD-EFVRLAATFTVGDAIPYLRWFDFGGYENDMRETGKELDEIIGEWLDEH---RQKRKMGENVQDLMSVLLSLLEGKTIEGMNVDIV-IKSFVLTVIQAGTEASITTLIWATSLILNNPSVLEKLKAELDIQVGKERYICESDLSKLTYLQAVVKETLRLYPPAPL 385          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C71BZ_ARATH (Cytochrome P450 71B38 OS=Arabidopsis thaliana GN=CYP71B38 PE=2 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 1.132e-19
Identity = 66/255 (25.88%), Postives = 127/255 (49.80%), Query Frame = 1
Query:    4 GDTVENLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENC--RAGTAIHIGQAAFGTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLD-LQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTESKD-MLDALLKICEDKSVEIDINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNP-IEESDITRLPYLQAVLKETFRLHPAVPLLL 753
            GD    +RKI     FS ++L + +++R ++ + L+  + ++      +++ + +  F  T ++I    F  +          + ++         G    +DFFP    +D + G   R+   F K+ + +  +ID  LK  Q +D ++    MLD + K  +  S ++  + +K +   +F AG +  ++T+ W +TEL R+P ++ K++ E+   +G     I E D+ ++ YL+ V+ ETFRLHP  PLLL
Sbjct:  117 GDDWREMRKITTLELFSVKKLKSFRYIREEESELLVKKISKSVDETQNSSVDLRKVLFSFTASIICRLAFGQNFHQCDFVDMEKVEELVLESEANLGTFAFADFFPGGWLIDRISGQHSRVNKAFYKLTNFYKHVIDDHLKTGQPQDHSDIVSVMLDMINKPTKADSFKVTYDHLKGVMSDIFLAGVNGGANTMIWTLTELSRHPRVMKKLQEEIRAMLGPNKERITEEDLEKVEYLKLVMVETFRLHPPAPLLL 371          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C71BG_ARATH (Cytochrome P450 71B16 OS=Arabidopsis thaliana GN=CYP71B16 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.478e-19
Identity = 59/158 (37.34%), Postives = 88/158 (55.70%), Query Frame = 1
Query:  301 SDFFPVLENLD-----LQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTESKD-MLDALLKICEDKSVEIDINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNP-IEESDITRLPYLQAVLKETFRLHPAVPLLL 753
            SDFFP+   L      + G  R +   F K+  +F R+ID      + +D  +  D MLD + K  +D S+ + I+ IK     +  AG DT + T+ WAMTEL RNP+++  V+ E+  + G     I + D+ ++P+L  V+KETFRLHP  PLLL
Sbjct:  218 SDFFPIA-GLGWLADWISGKHRWLNNVFFKLDALFQRVIDDHSDPGRWKDHKDIVDVMLDVMHKQGKDDSLRLTIDHIKGFLTNIIIAGIDTGALTMIWAMTELARNPELMKNVQGEIRDSFGNNKERITKEDLNKVPFLNMVIKETFRLHPVAPLLL 374          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C71AE_ARATH (Cytochrome P450 71A14 OS=Arabidopsis thaliana GN=CYP71A14 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.478e-19
Identity = 69/256 (26.95%), Postives = 134/256 (52.34%), Query Frame = 1
Query:    4 GDTVENLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFGTTLNLISNTIFSIDLADPTSK--TAREFKQTNWGMMEEAGKPNLSDFFPVLENLD-LQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTESKDMLDALLKI--CEDKSVEIDINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGK-GNPIEESDITRLPYLQAVLKETFRLHPAVPLLL 753
            G+    ++ +C  +  + +++ + + +R ++I +++  V++     + +++ +      L L S+    + L    SK  +  +FK     + E  G   + ++ P L  +D L+G+  +      ++   F  L+++ L++  +     + D +D LL +   E   V+I  +DIK L L +F AGT+TT + LEW MTEL+R+P+ + K++ E+     K    I E D+  + YL+AV+KE  RLHP +PLL+
Sbjct:  122 GEYWRQIKSVCIVNLLNKKKVQSFEKVREEEISEMMERVEKASSDSSPLNLSELL----LTLTSDVTSRVSLGRKYSKEESMSDFKIQMRKITELVGGFPVGEYIPCLAWIDKLRGVDEKAE----EVSKAFGDLMEKVLQEHLDATDKPTLDFVDVLLSLERHERNGVQIRRSDIKFLILDMFLAGTETTYALLEWIMTELIRHPECMKKLQDEIRAKATKLILYISEEDVEDMKYLKAVVKEVLRLHPPLPLLV 369          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C98A2_SOYBN (Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.930e-19
Identity = 72/252 (28.57%), Postives = 120/252 (47.62%), Query Frame = 1
Query:   22 LRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRA----GTAI----HIGQAAFGTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLDLQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTESKDMLDALLKICEDKSVEIDINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHPAVPLLL 753
            +RK+C    FS ++L+A + +R  ++  ++  V  +C +    G  I    H+G  AF     L     F ++      +   EFK      ++      +++  P L  +    +        G   D   R I     + +++     +  +DALL + +DK  ++  + I  L   +  AG DTT+ ++EWAM EL+RNP +  KV+ EL++ IG    + E+D + LPYLQ V KE  RLHP  PL+L
Sbjct:  123 VRKVCTLELFSPKRLEALRPIREDEVTSMVDSVYNHCTSTENLGKGILLRKHLGVVAFNNITRLAFGKRF-VNSEGVMDEQGVEFKAIVENGLKLGASLAMAEHIPWLRWMF--PLEEGAFAKHGARRDRLTRAIMAEHTEARKKSGGAKQHFVDALLTL-QDK-YDLSEDTIIGLLWDMITAGMDTTAISVEWAMAELIRNPRVQQKVQEELDRVIGLERVMTEADFSNLPYLQCVTKEAMRLHPPTPLML 369          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C78A3_SOYBN (Cytochrome P450 78A3 OS=Glycine max GN=CYP78A3 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.521e-19
Identity = 70/251 (27.89%), Postives = 128/251 (51.00%), Query Frame = 1
Query:   19 NLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFGTTLNLISNTIFSID--LADPTSKTAREFKQTNWGMMEEAGKP-----NLSDFFPVLENLDLQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTESKDMLDALLKICEDKSVEIDINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHPAVPLL 750
            +LR+I ++H F  RQ+ A++ L+R +I   + ++  N R   ++ + Q     +L+ +  ++F  +  L DP S         + G++ + G       N +D  P L + D Q IR R +     ++ + +R +   + + +      ++D +D LL + E   +  D + I  L+ ++F  GTDT +  +EW +  +  +P + SKV+ EL+  +GK   + E D+  + YL AV+KE  RLHP  PLL
Sbjct:  155 SLRRIASNHLFCPRQIKASE-LQRSQIAAQMVHILNNKRH-RSLRVRQVLKKASLSNMMCSVFGQEYKLHDPNSG------MEDLGILVDQGYDLLGLFNWADHLPFLAHFDAQNIRFRCS----NLVPMVNRFVGTIIAEHRASKTETNRDFVDVLLSLPEPDQLS-DSDMIAVLWEMIFR-GTDTVAVLIEWILARMALHPHVQSKVQEELDAVVGKARAVAEDDVAVMTYLPAVVKEVLRLHPPGPLL 391          
The following BLAST results are available for this feature:
BLAST of CX297693 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 219
Match NameE-valueIdentityDescription
C71B1_THLAR6.635e-2024.40Cytochrome P450 71B1 OS=Thlaspi arvense GN=CYP71B1... [more]
C71AK_ARATH6.635e-2025.49Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=C... [more]
C71C1_MAIZE8.665e-2025.40Cytochrome P450 71C1 OS=Zea mays GN=CYP71C1 PE=2 S... [more]
C82A3_SOYBN1.132e-1928.85Cytochrome P450 82A3 OS=Glycine max GN=CYP82A3 PE=... [more]
C82A2_SOYBN1.132e-1928.79Cytochrome P450 82A2 OS=Glycine max GN=CYP82A2 PE=... [more]
C71BZ_ARATH1.132e-1925.88Cytochrome P450 71B38 OS=Arabidopsis thaliana GN=C... [more]
C71BG_ARATH1.478e-1937.34Cytochrome P450 71B16 OS=Arabidopsis thaliana GN=C... [more]
C71AE_ARATH1.478e-1926.95Cytochrome P450 71A14 OS=Arabidopsis thaliana GN=C... [more]
C98A2_SOYBN1.930e-1928.57Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=... [more]
C78A3_SOYBN2.521e-1927.89Cytochrome P450 78A3 OS=Glycine max GN=CYP78A3 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC06004C03SK RindPdig24 Citrus clementina cDNA clone C06004C03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX297693 ID=CX297693; Name=CX297693; organism=Citrus clementina; type=EST; length=754bp
GAGGGCGACACTGTGGAGAATCTTCGAAAAATATGCAACTCACATGCTTT
CTCTAGTCGCCAACTCGATGCCAATCAGCACCTTCGGCGTAAGAAAATCC
AAGATCTTCTAGCTTATGTCCAAGAAAATTGCCGTGCAGGTACAGCAATA
CATATTGGCCAAGCTGCTTTCGGCACTACGCTTAATTTGATATCCAACAC
AATTTTTTCTATTGACTTGGCTGATCCCACATCAAAAACTGCGCGAGAGT
TTAAGCAAACAAATTGGGGTATGATGGAAGAAGCTGGAAAGCCTAACTTG
TCCGATTTTTTTCCTGTGCTTGAGAATCTTGACTTGCAAGGTATAAGGCG
TCGCATGACAGTTTATTTTGGCAAGATGCTCGATGTATTTGATCGCTTGA
TTGATCAACGATTGAAGCAAAGACAAGAACGAGATTTCACCGAATCCAAA
GATATGTTAGATGCTCTTCTCAAAATTTGTGAAGACAAAAGCGTGGAGAT
TGATATAAATGATATCAAACACTTGTTTCTGGTTTTGTTTGCTGCGGGGA
CTGATACTACTTCGAGTACATTGGAATGGGCAATGACAGAACTACTTCGC
AACCCAGATATTTTATCAAAAGTCCGATTAGAGTTAGAACAAACGATTGG
CAAAGGCAATCCAATTGAGGAATCAGACATCACCCGCTTACCTTATCTAC
AAGCAGTACTCAAAGAAACCTTCAGGTTGCACCCGGCAGTTCCTCTTTTA
CTTC
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