CX297701

Overview
NameCX297701
Unique NameCX297701
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length711
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX297701 vs. ExPASy Swiss-Prot
Match: NCB5R_ASPTN (NADH-cytochrome b5 reductase 1 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=cbr1 PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.920e-26
Identity = 57/95 (60.00%), Postives = 69/95 (72.63%), Query Frame = 3
Query:   27 NDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPPESWNGGVGFVSKEMIQTHCPAPASDIQVLRCGPPPMNKAMAAHLEALGYT 311
            ND TK+ LI+ANV  EDILL++EL+  A K  D F I+YVLN PP  WNGG GFV+ EMI+ H PAPA D+++L CGPPPM  AM    E+LGYT
Sbjct:  188 NDTTKIDLIFANVNEEDILLRDELEKLA-KEDDGFRIFYVLNNPPPGWNGGFGFVTAEMIKEHLPAPAKDVKILLCGPPPMVSAMKKATESLGYT 281          
BLAST of CX297701 vs. ExPASy Swiss-Prot
Match: NCB5R_PHANO (NADH-cytochrome b5 reductase 1 OS=Phaeosphaeria nodorum GN=CBR1 PE=3 SV=2)

HSP 1 Score: 118.242 bits (295), Expect = 4.277e-26
Identity = 58/97 (59.79%), Postives = 71/97 (73.20%), Query Frame = 3
Query:   18 REPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPPESWNGGVGFVSKEMIQTHCPAPASDIQVLRCGPPPMNKAMAAHLEALGY 308
            R   D T+V LI+ANV  EDILLKE+LD  AAK P +F ++YVLN PPE W GGVGFV+ +MI+   PAPASD+++L CGPPPM  AM    E+LGY
Sbjct:  171 RGQGDTTEVDLIFANVNPEDILLKEDLDALAAKDP-KFRVHYVLNNPPEGWTGGVGFVTADMIKEKLPAPASDVKILVCGPPPMVAAMKKATESLGY 266          
BLAST of CX297701 vs. ExPASy Swiss-Prot
Match: NCB5R_ASPNC (NADH-cytochrome b5 reductase 1 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=cbr1 PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 7.295e-26
Identity = 58/95 (61.05%), Postives = 70/95 (73.68%), Query Frame = 3
Query:   27 NDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPPESWNGGVGFVSKEMIQTHCPAPASDIQVLRCGPPPMNKAMAAHLEALGYT 311
            ND T+V LI+ANV  +DIL+K+EL+  A K  D F IYYVLN PPE W GGVGFV+ +MI+   PAP+SDI+VL CGPPPM  AM    E+LGYT
Sbjct:  197 NDTTQVDLIFANVNPDDILMKDELEQLA-KEDDGFRIYYVLNNPPEGWTGGVGFVTPDMIKERLPAPSSDIKVLLCGPPPMVSAMKKATESLGYT 290          
BLAST of CX297701 vs. ExPASy Swiss-Prot
Match: NCB5R_ASPOR (NADH-cytochrome b5 reductase 1 OS=Aspergillus oryzae GN=cbr1 PE=3 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 9.528e-26
Identity = 57/95 (60.00%), Postives = 68/95 (71.58%), Query Frame = 3
Query:   27 NDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPPESWNGGVGFVSKEMIQTHCPAPASDIQVLRCGPPPMNKAMAAHLEALGYT 311
            ND T+V LI+ANV  EDILLKEEL+    K  D F +YYVLN PPE W GGVGFV+ +MI+   PAPA DI+++ CGPPPM  AM    E+LGYT
Sbjct:  184 NDTTQVDLIFANVNPEDILLKEELEQLV-KEDDGFRVYYVLNNPPEGWTGGVGFVTPDMIKERLPAPAQDIKIMLCGPPPMISAMKKATESLGYT 277          
BLAST of CX297701 vs. ExPASy Swiss-Prot
Match: NCB5R_PICGU (NADH-cytochrome b5 reductase 1 OS=Pichia guilliermondii GN=CBR1 PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.244e-25
Identity = 53/98 (54.08%), Postives = 70/98 (71.43%), Query Frame = 3
Query:   15 IREPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPPESWNGGVGFVSKEMIQTHCPAPASDIQVLRCGPPPMNKAMAAHLEALGY 308
            +  P+DKTK+ L+YANVT EDILL+ ELD FA ++PD+F ++YVLN  PE+WNG VGFV+ E+++ H P    D  +L CGPPPM  AM  +   LGY
Sbjct:  171 LTNPDDKTKISLVYANVTEEDILLRAELDLFAKEHPDRFKVHYVLNNAPENWNGSVGFVTPEIMEKHLPNKDQDGYLLLCGPPPMISAMKKNAVTLGY 268          
BLAST of CX297701 vs. ExPASy Swiss-Prot
Match: NCB5R_PICST (NADH-cytochrome b5 reductase 1 OS=Pichia stipitis GN=CBR1 PE=3 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 1.376e-24
Identity = 52/98 (53.06%), Postives = 68/98 (69.39%), Query Frame = 3
Query:   15 IREPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPPESWNGGVGFVSKEMIQTHCPAPASDIQVLRCGPPPMNKAMAAHLEALGY 308
            +R P DKTK+ LIYANVT  DILLK ELD +A ++PD F+++YVLN+ PE+W G VGFV+ E+I +  P  + D  +L CGPPPM  AM      LG+
Sbjct:  171 LRNPADKTKISLIYANVTESDILLKSELDKWAEEHPDNFSVHYVLNEAPENWKGSVGFVTPEIIDSKLPKASDDSNLLLCGPPPMISAMKKAAVGLGF 268          
BLAST of CX297701 vs. ExPASy Swiss-Prot
Match: NCB5R_KLULA (NADH-cytochrome b5 reductase 1 OS=Kluyveromyces lactis GN=CBR1 PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.228e-24
Identity = 48/94 (51.06%), Postives = 68/94 (72.34%), Query Frame = 3
Query:   27 NDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPPESWNGGVGFVSKEMIQTHCPAPASDIQVLRCGPPPMNKAMAAHLEALGY 308
            +DKTKV L+Y N T EDILLK+ELD F  + PDQF +YY+L++ PE+W GGVG+++ + ++   PAPA  +Q+L CGPPPM  ++  +   LGY
Sbjct:  172 SDKTKVSLVYGNQTEEDILLKKELDAFVERKPDQFKVYYLLDKAPEAWTGGVGYITVDTMKERLPAPAEGVQLLVCGPPPMVSSIKRNAVTLGY 265          
BLAST of CX297701 vs. ExPASy Swiss-Prot
Match: NCB5R_YARLI (NADH-cytochrome b5 reductase 1 OS=Yarrowia lipolytica GN=CBR1 PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.165e-23
Identity = 51/96 (53.12%), Postives = 67/96 (69.79%), Query Frame = 3
Query:   21 EPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPPESWNGGVGFVSKEMIQTHCPAPASDIQVLRCGPPPMNKAMAAHLEALGY 308
            +P D TKV+L+YANV ++DILLK+ELD  AA+  D   I+YVLN  PE W G VGFV+KE+++ HCP P  + ++L CGPPPM  A+      LGY
Sbjct:  180 DPADNTKVNLVYANVNHDDILLKKELDAIAAEN-DNIKIHYVLNNAPEDWTGSVGFVTKEILEKHCPPPGPNTKLLLCGPPPMISALKKASVELGY 274          
BLAST of CX297701 vs. ExPASy Swiss-Prot
Match: NCB5R_LODEL (NADH-cytochrome b5 reductase 1 OS=Lodderomyces elongisporus GN=CBR1 PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.165e-23
Identity = 49/98 (50.00%), Postives = 68/98 (69.39%), Query Frame = 3
Query:   15 IREPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPPESWNGGVGFVSKEMIQTHCPAPASDIQVLRCGPPPMNKAMAAHLEALGY 308
            +  P DKTKVHL+YANVT  DILL++EL+ +A ++PD+  I++VLN+ PE W    GFV+ E+I  H P P++D  +L CGPPPM  AM     +LG+
Sbjct:  187 MNNPEDKTKVHLLYANVTENDILLRDELEQYAKEHPDRLKIHHVLNEAPEGWQHLTGFVTPELIDKHLPKPSADTNLLLCGPPPMISAMKKAAVSLGF 284          
BLAST of CX297701 vs. ExPASy Swiss-Prot
Match: NCB5R_MAGGR (NADH-cytochrome b5 reductase 1 OS=Magnaporthe grisea GN=CBR1 PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.426e-23
Identity = 52/97 (53.61%), Postives = 68/97 (70.10%), Query Frame = 3
Query:   18 REPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPPESWNGGVGFVSKEMIQTHCPAPASDIQVLRCGPPPMNKAMAAHLEALGY 308
            R   D T+V LI+ANVT EDILLKE+LD  AA+    F ++YVL++PPE W GGVGFV+++MI    P PA D+++L CGPPPM   +    EALG+
Sbjct:  198 RAAGDTTQVDLIFANVTKEDILLKEDLDALAAE-DKGFRVHYVLDRPPEGWTGGVGFVTQDMITKWLPKPADDVKILLCGPPPMVSGLKKATEALGF 293          
The following BLAST results are available for this feature:
BLAST of CX297701 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 107
Match NameE-valueIdentityDescription
NCB5R_ASPTN1.920e-2660.00NADH-cytochrome b5 reductase 1 OS=Aspergillus terr... [more]
NCB5R_PHANO4.277e-2659.79NADH-cytochrome b5 reductase 1 OS=Phaeosphaeria no... [more]
NCB5R_ASPNC7.295e-2661.05NADH-cytochrome b5 reductase 1 OS=Aspergillus nige... [more]
NCB5R_ASPOR9.528e-2660.00NADH-cytochrome b5 reductase 1 OS=Aspergillus oryz... [more]
NCB5R_PICGU1.244e-2554.08NADH-cytochrome b5 reductase 1 OS=Pichia guillierm... [more]
NCB5R_PICST1.376e-2453.06NADH-cytochrome b5 reductase 1 OS=Pichia stipitis ... [more]
NCB5R_KLULA5.228e-2451.06NADH-cytochrome b5 reductase 1 OS=Kluyveromyces la... [more]
NCB5R_YARLI1.165e-2353.13NADH-cytochrome b5 reductase 1 OS=Yarrowia lipolyt... [more]
NCB5R_LODEL1.165e-2350.00NADH-cytochrome b5 reductase 1 OS=Lodderomyces elo... [more]
NCB5R_MAGGR4.426e-2353.61NADH-cytochrome b5 reductase 1 OS=Magnaporthe gris... [more]

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Properties
Property NameValue
Genbank descriptionC06004C11SK RindPdig24 Citrus clementina cDNA clone C06004C11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX297701 ID=CX297701; Name=CX297701; organism=Citrus clementina; type=EST; length=711bp
GAGGCTAGAGCCATATTAGAGAACCAAATGACAAGACAAAGGTGCACCTC
ATTTATGCCAATGTTACATATGAGGACATTCTTTTAAAGGAAGAATTGGA
TGGATTTGCGGCGAAGTACCCTGATCAATTCACAATCTACTATGTGTTGA
ATCAGCCTCCTGAATCGTGGAATGGTGGTGTTGGCTTTGTCTCAAAGGAA
ATGATTCAAACCCATTGTCCCGCACCTGCTTCTGATATTCAGGTTCTGAG
ATGTGGTCCACCACCAATGAACAAGGCCATGGCTGCTCACCTCGAGGCAC
TTGGATATACTTCAGAAATGCTGTTCCAGTTCTAATCACTTCCATAAGGT
TGTCCAATTATTTGGACTGATATTCGTCACTCCTATTCGGTCCACATAAA
GAACTTTTTTACATCTCTTTTAAGCTGTATTTTGTTTCTCCTGTGACTAA
AGAAGCCGATGAAACCGGAGCATGGATTTTGTAATTGATCTTTTGCTTTA
ACCTATAAAAACAAATCTCCATGAGGTTTTTCAAATTAGGGATTTGTAGT
GCTATAGCTTGGAAACTGTAGAAAATAGGTTACAATAACCTAAATCAGGG
CAAGATTGGCCCTGATAGCCATTACCAATTATTGCACCATTGATACTTGA
AAATTTGTTGATGGCAAGATAATACTTTGATGACCTTAAAAAAAAAAAAA
AAAAAAAAAAA
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