CX297716
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX297716 vs. ExPASy Swiss-Prot
Match: RL30_MOUSE (60S ribosomal protein L30 OS=Mus musculus GN=Rpl30 PE=2 SV=2) HSP 1 Score: 160.229 bits (404), Expect = 9.852e-39 Identity = 73/98 (74.49%), Postives = 86/98 (87.76%), Query Frame = 3 Query: 120 ESINNRLALVMKSGKYTLGYKTVLRSLRSSKGKLILLSNNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKSLP 413 ESIN+RL LVMKSGKY LGYK L+ +R K KL++L+NNCP LRKSEIEYYAMLAK GVHHY+GNN++LGTACGKY+RV L+IIDPGDSDII+S+P Sbjct: 12 ESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPALRKSEIEYYAMLAKTGVHHYSGNNIELGTACGKYYRVCTLAIIDPGDSDIIRSMP 109
BLAST of CX297716 vs. ExPASy Swiss-Prot
Match: RL30_MACFA (60S ribosomal protein L30 OS=Macaca fascicularis GN=RPL30 PE=3 SV=3) HSP 1 Score: 160.229 bits (404), Expect = 9.852e-39 Identity = 73/98 (74.49%), Postives = 86/98 (87.76%), Query Frame = 3 Query: 120 ESINNRLALVMKSGKYTLGYKTVLRSLRSSKGKLILLSNNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKSLP 413 ESIN+RL LVMKSGKY LGYK L+ +R K KL++L+NNCP LRKSEIEYYAMLAK GVHHY+GNN++LGTACGKY+RV L+IIDPGDSDII+S+P Sbjct: 12 ESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPALRKSEIEYYAMLAKTGVHHYSGNNIELGTACGKYYRVCTLAIIDPGDSDIIRSMP 109
BLAST of CX297716 vs. ExPASy Swiss-Prot
Match: RL30_HUMAN (60S ribosomal protein L30 OS=Homo sapiens GN=RPL30 PE=1 SV=2) HSP 1 Score: 160.229 bits (404), Expect = 9.852e-39 Identity = 73/98 (74.49%), Postives = 86/98 (87.76%), Query Frame = 3 Query: 120 ESINNRLALVMKSGKYTLGYKTVLRSLRSSKGKLILLSNNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKSLP 413 ESIN+RL LVMKSGKY LGYK L+ +R K KL++L+NNCP LRKSEIEYYAMLAK GVHHY+GNN++LGTACGKY+RV L+IIDPGDSDII+S+P Sbjct: 12 ESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPALRKSEIEYYAMLAKTGVHHYSGNNIELGTACGKYYRVCTLAIIDPGDSDIIRSMP 109
BLAST of CX297716 vs. ExPASy Swiss-Prot
Match: RL30_CHICK (60S ribosomal protein L30 OS=Gallus gallus GN=RPL30 PE=3 SV=2) HSP 1 Score: 160.229 bits (404), Expect = 9.852e-39 Identity = 73/98 (74.49%), Postives = 86/98 (87.76%), Query Frame = 3 Query: 120 ESINNRLALVMKSGKYTLGYKTVLRSLRSSKGKLILLSNNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKSLP 413 ESIN+RL LVMKSGKY LGYK L+ +R K KL++L+NNCP LRKSEIEYYAMLAK GVHHY+GNN++LGTACGKY+RV L+IIDPGDSDII+S+P Sbjct: 12 ESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPALRKSEIEYYAMLAKTGVHHYSGNNIELGTACGKYYRVCTLAIIDPGDSDIIRSMP 109
BLAST of CX297716 vs. ExPASy Swiss-Prot
Match: RL30_BOVIN (60S ribosomal protein L30 OS=Bos taurus GN=RPL30 PE=3 SV=3) HSP 1 Score: 160.229 bits (404), Expect = 9.852e-39 Identity = 73/98 (74.49%), Postives = 86/98 (87.76%), Query Frame = 3 Query: 120 ESINNRLALVMKSGKYTLGYKTVLRSLRSSKGKLILLSNNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKSLP 413 ESIN+RL LVMKSGKY LGYK L+ +R K KL++L+NNCP LRKSEIEYYAMLAK GVHHY+GNN++LGTACGKY+RV L+IIDPGDSDII+S+P Sbjct: 12 ESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPALRKSEIEYYAMLAKTGVHHYSGNNIELGTACGKYYRVCTLAIIDPGDSDIIRSMP 109
BLAST of CX297716 vs. ExPASy Swiss-Prot
Match: RL30_ICTPU (60S ribosomal protein L30 OS=Ictalurus punctatus GN=rpl30 PE=3 SV=2) HSP 1 Score: 156.377 bits (394), Expect = 1.423e-37 Identity = 71/100 (71.00%), Postives = 86/100 (86.00%), Query Frame = 3 Query: 120 ESINNRLALVMKSGKYTLGYKTVLRSLRSSKGKLILLSNNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKSLPGE 419 ESIN+RL LVMKSGKY LGYK + +R K KL++L+NNCP LRKSEIEYYAML+K GVHHY+GNN++LGTACGKY+RV L+IIDPGDSDII+S+P + Sbjct: 12 ESINSRLQLVMKSGKYVLGYKQSQKMIRQGKAKLVILANNCPALRKSEIEYYAMLSKTGVHHYSGNNIELGTACGKYYRVCTLAIIDPGDSDIIRSMPDQ 111
BLAST of CX297716 vs. ExPASy Swiss-Prot
Match: RL30_SPOFR (60S ribosomal protein L30 OS=Spodoptera frugiperda GN=RpL30 PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 3.169e-37 Identity = 71/98 (72.45%), Postives = 85/98 (86.73%), Query Frame = 3 Query: 120 ESINNRLALVMKSGKYTLGYKTVLRSLRSSKGKLILLSNNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKSLP 413 ESIN+RLALVMKSGKY LGYK L++LR K KL++++ N PPLRKSEIEYYA+LAK GVHHY+GNN++LGTACGKY+RV L+I DPGDSDII +LP Sbjct: 12 ESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTLP 109
BLAST of CX297716 vs. ExPASy Swiss-Prot
Match: RL30_BRABE (60S ribosomal protein L30 OS=Branchiostoma belcheri GN=RPL30 PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 5.406e-37 Identity = 73/100 (73.00%), Postives = 84/100 (84.00%), Query Frame = 3 Query: 120 ESINNRLALVMKSGKYTLGYKTVLRSLRSSKGKLILLSNNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKSLPGE 419 ESIN+RL LVMKSGKY LG K L+ LR K KLI+++NN P LRKSEIEYYAMLAK GVHHY+GNN++LGTACGKYFRV L+I DPGDSDII+S+P E Sbjct: 9 ESINSRLQLVMKSGKYVLGLKETLKVLRQGKAKLIIIANNTPALRKSEIEYYAMLAKTGVHHYSGNNIELGTACGKYFRVCTLAITDPGDSDIIRSMPAE 108
BLAST of CX297716 vs. ExPASy Swiss-Prot
Match: RL30B_SCHPO (60S ribosomal protein L30-2 OS=Schizosaccharomyces pombe GN=rpl30b PE=2 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 2.777e-33 Identity = 64/94 (68.09%), Postives = 81/94 (86.17%), Query Frame = 3 Query: 120 ESINNRLALVMKSGKYTLGYKTVLRSLRSSKGKLILLSNNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDII 401 ++IN++LAL MKSGKY LGYK+ L++LRS K KLIL++ N PPLRKSE+EYYAML++ VHHY+GNN+DLGTACGK FRV L++ID GDSDI+ Sbjct: 22 DTINSKLALTMKSGKYVLGYKSTLKTLRSGKAKLILIAANAPPLRKSELEYYAMLSRCSVHHYSGNNIDLGTACGKLFRVGVLAVIDAGDSDIL 115
BLAST of CX297716 vs. ExPASy Swiss-Prot
Match: RL30A_SCHPO (60S ribosomal protein L30-1 OS=Schizosaccharomyces pombe GN=rpl30a PE=2 SV=2) HSP 1 Score: 141.739 bits (356), Expect = 3.626e-33 Identity = 65/94 (69.15%), Postives = 78/94 (82.98%), Query Frame = 3 Query: 120 ESINNRLALVMKSGKYTLGYKTVLRSLRSSKGKLILLSNNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDII 401 ++IN +LAL MKSGKY LGYK+ L++LRS K KLIL++ NCPPLRKSE+EYYAML+K VHHY G N+DLGTACGK FRV L+I D GDSDI+ Sbjct: 14 DTINAKLALTMKSGKYVLGYKSTLKTLRSGKAKLILIAGNCPPLRKSELEYYAMLSKANVHHYAGTNIDLGTACGKLFRVGVLAITDAGDSDIL 107 The following BLAST results are available for this feature:
BLAST of CX297716 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 50
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Sequences
The
following sequences are available for this feature:
EST sequence >CX297716 ID=CX297716; Name=CX297716; organism=Citrus clementina; type=EST; length=716bpback to top |