CX297729
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX297729 vs. ExPASy Swiss-Prot
Match: FADA_ACIBY (3-ketoacyl-CoA thiolase OS=Acinetobacter baumannii (strain AYE) GN=fadA PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.633e-11 Identity = 48/144 (33.33%), Postives = 71/144 (49.31%), Query Frame = 1 Query: 253 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQXXXXXXXXXXXGFYDIGIGAGLESMTVNPMAWEGSVNPKV-KAFEQAQNCL 681 DVVIV R+A+ KSK G F++ D L A +++A++ + D +EV D++ G V Q + R AG P+TV +TVNR C S +Q DI I G+E M M +NP+ K + +A N + Sbjct: 8 DVVIVDGVRSAMGKSKNGMFRNVRADSLSAELVRALVARNQFDVNEVEDLIWGCVNQTLEQGMNIGRNIGLLAGLPKTVAGQTVNRLCGSSMQAIHTAAAQIATNQGDIFIIGGVEHMGHVGMMHGIDLNPEASKHYAKASNMM 151
BLAST of CX297729 vs. ExPASy Swiss-Prot
Match: FADA_ACIBS (3-ketoacyl-CoA thiolase OS=Acinetobacter baumannii (strain SDF) GN=fadA PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.633e-11 Identity = 48/144 (33.33%), Postives = 71/144 (49.31%), Query Frame = 1 Query: 253 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQXXXXXXXXXXXGFYDIGIGAGLESMTVNPMAWEGSVNPKV-KAFEQAQNCL 681 DVVIV R+A+ KSK G F++ D L A +++A++ + D +EV D++ G V Q + R AG P+TV +TVNR C S +Q DI I G+E M M +NP+ K + +A N + Sbjct: 8 DVVIVDGVRSAMGKSKNGMFRNVRADSLSAELVRALVARNQFDVNEVEDLIWGCVNQTLEQGMNIGRNIGLLAGLPKTVAGQTVNRLCGSSMQAIHTAAAQIATNQGDIFIIGGVEHMGHVGMMHGIDLNPEASKHYAKASNMM 151
BLAST of CX297729 vs. ExPASy Swiss-Prot
Match: FADA_ACIBC (3-ketoacyl-CoA thiolase OS=Acinetobacter baumannii (strain ACICU) GN=fadA PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.633e-11 Identity = 48/144 (33.33%), Postives = 71/144 (49.31%), Query Frame = 1 Query: 253 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQXXXXXXXXXXXGFYDIGIGAGLESMTVNPMAWEGSVNPKV-KAFEQAQNCL 681 DVVIV R+A+ KSK G F++ D L A +++A++ + D +EV D++ G V Q + R AG P+TV +TVNR C S +Q DI I G+E M M +NP+ K + +A N + Sbjct: 8 DVVIVDGVRSAMGKSKNGMFRNVRADSLSAELVRALVARNQFDVNEVEDLIWGCVNQTLEQGMNIGRNIGLLAGLPKTVAGQTVNRLCGSSMQAIHTAAAQIATNQGDIFIIGGVEHMGHVGMMHGIDLNPEASKHYAKASNMM 151
BLAST of CX297729 vs. ExPASy Swiss-Prot
Match: FADA_ACIB5 (3-ketoacyl-CoA thiolase OS=Acinetobacter baumannii (strain AB0057) GN=fadA PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.633e-11 Identity = 48/144 (33.33%), Postives = 71/144 (49.31%), Query Frame = 1 Query: 253 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQXXXXXXXXXXXGFYDIGIGAGLESMTVNPMAWEGSVNPKV-KAFEQAQNCL 681 DVVIV R+A+ KSK G F++ D L A +++A++ + D +EV D++ G V Q + R AG P+TV +TVNR C S +Q DI I G+E M M +NP+ K + +A N + Sbjct: 8 DVVIVDGVRSAMGKSKNGMFRNVRADSLSAELVRALVARNQFDVNEVEDLIWGCVNQTLEQGMNIGRNIGLLAGLPKTVAGQTVNRLCGSSMQAIHTAAAQIATNQGDIFIIGGVEHMGHVGMMHGIDLNPEASKHYAKASNMM 151
BLAST of CX297729 vs. ExPASy Swiss-Prot
Match: FADA_ACIB3 (3-ketoacyl-CoA thiolase OS=Acinetobacter baumannii (strain AB307-0294) GN=fadA PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.633e-11 Identity = 48/144 (33.33%), Postives = 71/144 (49.31%), Query Frame = 1 Query: 253 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQXXXXXXXXXXXGFYDIGIGAGLESMTVNPMAWEGSVNPKV-KAFEQAQNCL 681 DVVIV R+A+ KSK G F++ D L A +++A++ + D +EV D++ G V Q + R AG P+TV +TVNR C S +Q DI I G+E M M +NP+ K + +A N + Sbjct: 8 DVVIVDGVRSAMGKSKNGMFRNVRADSLSAELVRALVARNQFDVNEVEDLIWGCVNQTLEQGMNIGRNIGLLAGLPKTVAGQTVNRLCGSSMQAIHTAAAQIATNQGDIFIIGGVEHMGHVGMMHGIDLNPEASKHYAKASNMM 151
BLAST of CX297729 vs. ExPASy Swiss-Prot
Match: FADA_PSYWF (3-ketoacyl-CoA thiolase OS=Psychrobacter sp. (strain PRwf-1) GN=fadA PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.745e-11 Identity = 47/150 (31.33%), Postives = 74/150 (49.33%), Query Frame = 1 Query: 235 TSVYGDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQXXXXXXXXXXXGFYDIGIGAGLESMTVNPMAWEGSVNPKV-KAFEQAQNCL 681 T++ DVVIV RTA+ KSK G F++ D + A +++A++++ + D +EV DI+ G V Q + R A P+T +TVNR C S +Q D+ I G+E M M +NP+ K + +A N + Sbjct: 2 TTLSPKDVVIVDGVRTAMGKSKNGMFRNVRADSMSAELVRALVKRNDFDTNEVEDIIWGCVNQTLEQGMNIGRNIGLLADIPKTAGGQTVNRLCGSSMQALHTAAAQIMTNQGDVFIIGGVEHMGHVGMMHGIDINPEASKHYAKASNMM 151
BLAST of CX297729 vs. ExPASy Swiss-Prot
Match: FADA_VIBFM (3-ketoacyl-CoA thiolase OS=Vibrio fischeri (strain MJ11) GN=fadA PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.198e-11 Identity = 43/124 (34.68%), Postives = 66/124 (53.23%), Query Frame = 1 Query: 253 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKT-NVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQXXXXXXXXXXXGFYDIGIGAGLESMTVNPM 621 +VVIV RT + +SK G F+ T +DL A ++K ++++ +VDP+++ DI G V Q + R +A AG P+++ TVNR C S +Q G +I I G+E M PM Sbjct: 3 NVVIVDCIRTPMGRSKNGVFRYTRAEDLSAHLMKGLLKRNPSVDPNDIEDIYWGCVQQTLEQGFNIARNSALLAGLPQSIAATTVNRLCGSSMQALHDASRAIMVGDAEICIIGGVEHMGHVPM 126
BLAST of CX297729 vs. ExPASy Swiss-Prot
Match: FADA_PSEHT (3-ketoacyl-CoA thiolase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=fadA PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.198e-11 Identity = 45/130 (34.62%), Postives = 63/130 (48.46%), Query Frame = 1 Query: 259 VIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTN-VDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQXXXXXXXXXXXGFYDIGIGAGLESMTVNPMAWEGSVNP 645 VIV RT + +SK G FK+ +DL A ++K ++++ VDP+ + DI G V Q + R AA AG P +VP TVNR C S +Q G D + G+E M PM +P Sbjct: 5 VIVDCIRTPMGRSKGGVFKNKRAEDLSAHLMKGLLDRNPAVDPASIDDIYWGCVQQTLEQGFNVARNAALLAGIPHSVPAVTVNRLCGSSMQALHDAARAIMTGAGDTYLIGGVEHMGHVPMTHGNDFHP 134 The following BLAST results are available for this feature:
BLAST of CX297729 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 48
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Sequences
The
following sequences are available for this feature:
EST sequence >CX297729 ID=CX297729; Name=CX297729; organism=Citrus clementina; type=EST; length=686bpback to top |