CX297736
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX297736 vs. ExPASy Swiss-Prot
Match: YAY4_SCHPO (UPF0103 protein C4H3.04c OS=Schizosaccharomyces pombe GN=SPAC4H3.04c PE=2 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 3.605e-39 Identity = 89/226 (39.38%), Postives = 133/226 (58.85%), Query Frame = 3 Query: 27 IDPTSISRVFLLGPSHHYYTPKCALSTATVYKTPIGDLPLDLEVIEELKAT-GKFELMDICVDEAEHSMEMHLPYLA--KVFEGHL--IKIVPILVGAVNAENEAMYGRLFAKYVDDPSNFFSVSSDFCHWGSRFNY--------------MHYDKKHG----VIHKSIEALDKMGMDIIETGDPDAFKKYLLEYDNTICGRHPISVFLHMLGNCSTKIKIKFLRY 635 +D + I RVF+ GPSHH +T KC +S A++ TP+GDL +D ++ ++L A+ F+ M + VDE+EHS+EM P LA + +G L +KIVPI++GA+ + + ++Y+ D SN F +SSDFCHWG RF Y + Y ++ G I++SI LD +GM IIET D F +YL NTICGR+PI + + + + + KF+ Y Sbjct: 63 LDFSKIQRVFVFGPSHHIFTRKCLVSRASICSTPLGDLKVDEDLCQKLVASDNSFDSMTLDVDESEHSLEMQFPLLAFHLLKQGCLGKVKIVPIMIGALTSTTMMAAAKFLSQYIKDESNSFVISSDFCHWGRRFGYTLYLNDTNQLEDAVLKYKRRGGPTSPKIYESISNLDHIGMKIIETKSSDDFSEYLKTTQNTICGRYPIELIMKSMECANFSERFKFISY 288
BLAST of CX297736 vs. ExPASy Swiss-Prot
Match: YJX8_YEAST (UPF0103 protein YJR008W OS=Saccharomyces cerevisiae GN=YJR008W PE=1 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 7.796e-26 Identity = 78/228 (34.21%), Postives = 116/228 (50.88%), Query Frame = 3 Query: 39 SISRVFLLGPSHH-YYTPKCALSTATVYKTPIGDLPLDLEVIE-----ELKATGK--FELMDICVDEAEHSMEMHLPYLAKVFEGH-----LIKIVPILVGAVNAENEAMYGRLFAKYVDDPSNFFSVSSDFCHWGSRFNYMHYD-------------------------KKHGV-IHKSIEALDKMGMDIIE---TGDP-DAFKKYLLEYDNTICGRHPISVFLHML 593 ++ R+F+LGPSHH Y+ + +S + +TP+G+L +D ++ + E GK F+ MD D AEHS+EM LP L + + +K+ P++V + + + G + ++Y+ DP+N F VSSDFCHWG RF Y Y H V I +SIE +D+ M + G+ DA+K+YL NTICG PISV L L Sbjct: 69 NVKRIFILGPSHHIYFKNQILVSAFSELETPLGNLKVDTDLCKTLIQKEYPENGKKLFKPMDHDTDMAEHSLEMQLPMLVETLKWREISLDTVKVFPMMVSHNSVDVDRCIGNILSEYIKDPNNLFIVSSDFCHWGRRFQYTGYVGSKEELNDAIQEETEVEMLTARSKLSHHQVPIWQSIEIMDRYAMKTLSDTPNGERYDAWKQYLEITGNTICGEKPISVILSAL 296
BLAST of CX297736 vs. ExPASy Swiss-Prot
Match: Y992_IGNH4 (UPF0103 protein Igni_0992 OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=Igni_0992 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.252e-11 Identity = 47/180 (26.11%), Postives = 87/180 (48.33%), Query Frame = 3 Query: 51 VFLLGPSHHYYTPKCALSTATVYKTPIGDLPLDLEVIEELKATGKFELMDICVDEAEHSMEMHLPYLAKVFEGHLIKIVPILVGAVNAENEAMYGRLFAKYVDDPSNFFSVSSDFCHWGSRFNYMHYDKKHGVIHKSIEALDKMGMDIIETGDPDAFKKYLLEYDNTICGRHPISVFLHM 590 V ++GP+H P ++ ++++TP+G + D E I EL D EHS+E+ LP+L +F G +IVPI++ + + + +++ + V S S N HY+ + K + AL+K I DP+ ++ L++YD ++CG P+ V +++ Sbjct: 81 VVIIGPNHTGLGPAVSVMPPSIWETPLGGVKTDDEAISELLKVSNVVEEDYSAHAYEHSLEVQLPFLQYLF-GDSFRIVPIVMKVQTPSVARLLMQSIKEAMENLGRDYVVLS-----SSDLN--HYEPHDITVEKDMLALEK-----IVNLDPEGLQEVLVKYDISMCGPGPVMVNMYL 247 The following BLAST results are available for this feature:
BLAST of CX297736 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >CX297736 ID=CX297736; Name=CX297736; organism=Citrus clementina; type=EST; length=741bpback to top |