CX297737

Overview
NameCX297737
Unique NameCX297737
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length519
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX297737 vs. ExPASy Swiss-Prot
Match: ADT2_WHEAT (ADP,ATP carrier protein 2, mitochondrial OS=Triticum aestivum GN=ANT-G2 PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 9.683e-22
Identity = 53/74 (71.62%), Postives = 57/74 (77.03%), Query Frame = 3
Query:    3 GAGLASYPIDTVRRRMMMTSGEAVKYKSSLHAFQEIIKNEGTKSLFKGAGANILRXXXXXXXXXXYDKLHLVLF 224
            GAGLASYPIDTVRRRMMMTSGEAVKYKSSL AFQ+I   EG KSLFKGAGANILR          YD+L ++ F
Sbjct:  249 GAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFQQIPAKEGAKSLFKGAGANILRAIAGAGVLSGYDQLQILFF 322          
BLAST of CX297737 vs. ExPASy Swiss-Prot
Match: ADT_NEUCR (ADP,ATP carrier protein OS=Neurospora crassa GN=acp PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.546e-19
Identity = 47/73 (64.38%), Postives = 55/73 (75.34%), Query Frame = 3
Query:    6 AGLASYPIDTVRRRMMMTSGEAVKYKSSLHAFQEIIKNEGTKSLFKGAGANILRXXXXXXXXXXYDKLHLVLF 224
            AG+ASYP+DT+RRRMMMTSGEAVKYKSS  A  +I+  EG KSLFKGAGANILR          YD+L ++LF
Sbjct:  232 AGIASYPLDTIRRRMMMTSGEAVKYKSSFDAASQIVAKEGVKSLFKGAGANILRGVAGAGVLSIYDQLQVLLF 304          
BLAST of CX297737 vs. ExPASy Swiss-Prot
Match: ADT_KLULA (ADP,ATP carrier protein OS=Kluyveromyces lactis GN=AAC PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 8.483e-18
Identity = 44/74 (59.46%), Postives = 53/74 (71.62%), Query Frame = 3
Query:    3 GAGLASYPIDTVRRRMMMTSGEAVKYKSSLHAFQEIIKNEGTKSLFKGAGANILRXXXXXXXXXXYDKLHLVLF 224
            GA  ASYP+DTVRRRMMMTSG+AVKY  +  AF++I+  EG KSLFKG GANILR          YD+L ++LF
Sbjct:  227 GASTASYPLDTVRRRMMMTSGQAVKYDGAFDAFRKIVAAEGIKSLFKGCGANILRGVAGAGVISMYDQLQVILF 300          
BLAST of CX297737 vs. ExPASy Swiss-Prot
Match: ADT_SCHPO (ADP,ATP carrier protein OS=Schizosaccharomyces pombe GN=anc1 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.108e-17
Identity = 42/74 (56.76%), Postives = 54/74 (72.97%), Query Frame = 3
Query:    3 GAGLASYPIDTVRRRMMMTSGEAVKYKSSLHAFQEIIKNEGTKSLFKGAGANILRXXXXXXXXXXYDKLHLVLF 224
            G+G+ASYP+DT+RRRMMMTSGEAVKY SS    ++I+  EG +S FKGAGANILR          YD++ L++F
Sbjct:  245 GSGVASYPLDTIRRRMMMTSGEAVKYSSSFECGRQILAKEGARSFFKGAGANILRGVAGAGVLSIYDQVQLLMF 318          
BLAST of CX297737 vs. ExPASy Swiss-Prot
Match: ADT3_YEAST (ADP,ATP carrier protein 3 OS=Saccharomyces cerevisiae GN=AAC3 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 2.729e-16
Identity = 40/74 (54.05%), Postives = 51/74 (68.92%), Query Frame = 3
Query:    3 GAGLASYPIDTVRRRMMMTSGEAVKYKSSLHAFQEIIKNEGTKSLFKGAGANILRXXXXXXXXXXYDKLHLVLF 224
            GA   SYP+DTVRRRMMMTSG+AVKY  ++   ++I+ +EG  SLFKG GANILR          YD+L ++LF
Sbjct:  229 GASTCSYPLDTVRRRMMMTSGQAVKYNGAIDCLKKIVASEGVGSLFKGCGANILRSVAGAGVISMYDQLQMILF 302          
BLAST of CX297737 vs. ExPASy Swiss-Prot
Match: ADT1_YEAST (ADP,ATP carrier protein 1 OS=Saccharomyces cerevisiae GN=AAC1 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 6.079e-16
Identity = 39/74 (52.70%), Postives = 50/74 (67.57%), Query Frame = 3
Query:    3 GAGLASYPIDTVRRRMMMTSGEAVKYKSSLHAFQEIIKNEGTKSLFKGAGANILRXXXXXXXXXXYDKLHLVLF 224
            GA  ASYP+DTVRRRMMMTSG+ +KY  +L   ++I++ EG  SLFKG GANI R          YD+L L++F
Sbjct:  231 GASTASYPLDTVRRRMMMTSGQTIKYDGALDCLRKIVQKEGAYSLFKGCGANIFRGVAAAGVISLYDQLQLIMF 304          
BLAST of CX297737 vs. ExPASy Swiss-Prot
Match: ADT2_YEAST (ADP,ATP carrier protein 2 OS=Saccharomyces cerevisiae GN=AAC2 PE=1 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 1.354e-15
Identity = 40/74 (54.05%), Postives = 49/74 (66.22%), Query Frame = 3
Query:    3 GAGLASYPIDTVRRRMMMTSGEAVKYKSSLHAFQEIIKNEGTKSLFKGAGANILRXXXXXXXXXXYDKLHLVLF 224
            GA   SYP+DTVRRRMMMTSG+AVKY  +    ++I+  EG  SLFKG GANILR          YD+L ++LF
Sbjct:  240 GASTCSYPLDTVRRRMMMTSGQAVKYDGAFDCLRKIVAAEGVGSLFKGCGANILRGVAGAGVISMYDQLQMILF 313          
BLAST of CX297737 vs. ExPASy Swiss-Prot
Match: ADT2_ANOGA (ADP,ATP carrier protein 2 OS=Anopheles gambiae GN=AGAP002358 PE=3 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 6.956e-12
Identity = 37/75 (49.33%), Postives = 46/75 (61.33%), Query Frame = 3
Query:    6 AGLASYPIDTVRRRMMMTSGEA---VKYKSSLHAFQEIIKNEGTKSLFKGAGANILRXXXXXXXXXXYDKLHLVL 221
            AG+ SYP DTVRRRMMM SG A   + YK +LH +  I K EGT + FKGA +N+LR          YD++  VL
Sbjct:  226 AGIVSYPFDTVRRRMMMQSGRAKSEIVYKGTLHCWATIAKQEGTGAFFKGAFSNVLRGTGGAFVLVLYDEIKKVL 300          
BLAST of CX297737 vs. ExPASy Swiss-Prot
Match: ADT_DROME (ADP,ATP carrier protein OS=Drosophila melanogaster GN=sesB PE=2 SV=4)

HSP 1 Score: 68.9366 bits (167), Expect = 1.550e-11
Identity = 38/75 (50.67%), Postives = 46/75 (61.33%), Query Frame = 3
Query:    6 AGLASYPIDTVRRRMMMTSGEA---VKYKSSLHAFQEIIKNEGTKSLFKGAGANILRXXXXXXXXXXYDKLHLVL 221
            AG+ SYP DTVRRRMMM SG     V YK++LH +  I K EGT + FKGA +NILR          YD++  VL
Sbjct:  238 AGIVSYPFDTVRRRMMMQSGRKATEVIYKNTLHCWATIAKQEGTGAFFKGAFSNILRGTGGAFVLVLYDEIKKVL 312          
BLAST of CX297737 vs. ExPASy Swiss-Prot
Match: ADT3_BOVIN (ADP/ATP translocase 3 OS=Bos taurus GN=SLC25A6 PE=2 SV=3)

HSP 1 Score: 67.0106 bits (162), Expect = 5.888e-11
Identity = 34/75 (45.33%), Postives = 48/75 (64.00%), Query Frame = 3
Query:    6 AGLASYPIDTVRRRMMMTSGEA---VKYKSSLHAFQEIIKNEGTKSLFKGAGANILRXXXXXXXXXXYDKLHLVL 221
            AG+ SYP DTVRRRMMM SG     + YK ++  +++I+K+EG K+ FKGA +N+LR          YD+L  V+
Sbjct:  224 AGVVSYPFDTVRRRMMMQSGRKGADIMYKGTVDCWRKILKDEGGKAFFKGAWSNVLRGMGGAFVLVLYDELKKVI 298          
The following BLAST results are available for this feature:
BLAST of CX297737 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
ADT2_WHEAT9.683e-2271.62ADP,ATP carrier protein 2, mitochondrial OS=Tritic... [more]
ADT_NEUCR1.546e-1964.38ADP,ATP carrier protein OS=Neurospora crassa GN=ac... [more]
ADT_KLULA8.483e-1859.46ADP,ATP carrier protein OS=Kluyveromyces lactis GN... [more]
ADT_SCHPO1.108e-1756.76ADP,ATP carrier protein OS=Schizosaccharomyces pom... [more]
ADT3_YEAST2.729e-1654.05ADP,ATP carrier protein 3 OS=Saccharomyces cerevis... [more]
ADT1_YEAST6.079e-1652.70ADP,ATP carrier protein 1 OS=Saccharomyces cerevis... [more]
ADT2_YEAST1.354e-1554.05ADP,ATP carrier protein 2 OS=Saccharomyces cerevis... [more]
ADT2_ANOGA6.956e-1249.33ADP,ATP carrier protein 2 OS=Anopheles gambiae GN=... [more]
ADT_DROME1.550e-1150.67ADP,ATP carrier protein OS=Drosophila melanogaster... [more]
ADT3_BOVIN5.888e-1145.33ADP/ATP translocase 3 OS=Bos taurus GN=SLC25A6 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC06004F12SK RindPdig24 Citrus clementina cDNA clone C06004F12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX297737 ID=CX297737; Name=CX297737; organism=Citrus clementina; type=EST; length=519bp
TTGGTGCTGGTTTGGCTTCTTACCCAATTGATACGGTGCGTAGAAGGATG
ATGATGACCTCTGGAGAAGCTGTGAAGTACAAGAGCTCTTTGCATGCATT
CCAGGAAATTATAAAGAATGAAGGCACTAAATCACTCTTCAAAGGTGCTG
GTGCAAACATTCTGCGTGCTGTGGCAGGAGCTGGTGTGCTTGCCGGTTAT
GACAAGCTGCATCTGGTTCTATTTGGCAAGAAATACGGATCCGGTGGTGG
CGGTTAATACTTGTACAAGATGTTGGTGAAAATTCTATAGGTGCTCTTCT
CAAGTTTGAATAATTTTGGATGATCGATAGTGTTATTAATATTTATCCGG
TTTTTAGGGATTTGATAAAAGAAAAGATTATAGTCGTCAAAGAACTGTTT
GAATTTGAGTGTTTTTGTGCTTGAGCACTAGACTCAAGTGTTGTGATAAT
AATTTAAATATTTTTCACTTGAATTTGGAGGTTGAAGCCGTTTGCAACCC
CATCATCACTCCAGGGGGG
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