CX297751
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX297751 vs. ExPASy Swiss-Prot
Match: H31_TETTH (Histone H3 OS=Tetrahymena thermophila GN=HHT1 PE=1 SV=2) HSP 1 Score: 224.942 bits (572), Expect = 2.208e-58 Identity = 110/133 (82.71%), Postives = 127/133 (95.49%), Query Frame = 2 Query: 44 MARTKQTARKSTGGKAPRKQLASKAARKAAPSTGGVKKPHRYKPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQSSAIGALQESVEAYLVSLFEDTNLCAIHAKRVTIQSKDIQLARRLRG 442 MARTKQTARKSTG KAPRKQLASKAARK+AP+TGG+KKPHR++PGTVALREIR+YQKST+LLIRKLPFQRLVR+IA +FK++LRFQSSA+ ALQE+ EAYLV LFEDTNLCAIHA+RVTI +KD+QLARR+RG Sbjct: 1 MARTKQTARKSTGAKAPRKQLASKAARKSAPATGGIKKPHRFRPGTVALREIRKYQKSTDLLIRKLPFQRLVRDIAHEFKAELRFQSSAVLALQEAAEAYLVGLFEDTNLCAIHARRVTIMTKDMQLARRIRG 133
BLAST of CX297751 vs. ExPASy Swiss-Prot
Match: H31_TETPY (Histone H3 OS=Tetrahymena pyriformis PE=1 SV=2) HSP 1 Score: 224.942 bits (572), Expect = 2.208e-58 Identity = 110/133 (82.71%), Postives = 127/133 (95.49%), Query Frame = 2 Query: 44 MARTKQTARKSTGGKAPRKQLASKAARKAAPSTGGVKKPHRYKPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQSSAIGALQESVEAYLVSLFEDTNLCAIHAKRVTIQSKDIQLARRLRG 442 MARTKQTARKSTG KAPRKQLASKAARK+AP+TGG+KKPHR++PGTVALREIR+YQKST+LLIRKLPFQRLVR+IA +FK++LRFQSSA+ ALQE+ EAYLV LFEDTNLCAIHA+RVTI +KD+QLARR+RG Sbjct: 1 MARTKQTARKSTGAKAPRKQLASKAARKSAPATGGIKKPHRFRPGTVALREIRKYQKSTDLLIRKLPFQRLVRDIAHEFKAELRFQSSAVLALQEAAEAYLVGLFEDTNLCAIHARRVTIMTKDMQLARRIRG 133
BLAST of CX297751 vs. ExPASy Swiss-Prot
Match: H3_MASBA (Histone H3 OS=Mastigamoeba balamuthi PE=2 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 2.883e-58 Identity = 115/133 (86.47%), Postives = 123/133 (92.48%), Query Frame = 2 Query: 44 MARTKQTARKSTGGKAPRKQLASKAARKAAPSTGGVKKPHRYKPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQSSAIGALQESVEAYLVSLFEDTNLCAIHAKRVTIQSKDIQLARRLRG 442 MARTKQTARKSTGGKAPRK +A+KA RK AP GGVKKPHR++PGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFK+DLRFQS+AI ALQE+ EAYLV LFEDTNLCAIHAKRVTI KDIQLARR+RG Sbjct: 1 MARTKQTARKSTGGKAPRKAVATKA-RKTAPPVGGVKKPHRFRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIAALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 132
BLAST of CX297751 vs. ExPASy Swiss-Prot
Match: H32_CICIN (Histone H3.2 OS=Cichorium intybus PE=2 SV=3) HSP 1 Score: 224.172 bits (570), Expect = 3.766e-58 Identity = 113/133 (84.96%), Postives = 123/133 (92.48%), Query Frame = 2 Query: 44 MARTKQTARKSTGGKAPRKQLASKAARKAAPSTGGVKKPHRYKPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQSSAIGALQESVEAYLVSLFEDTNLCAIHAKRVTIQSKDIQLARRLRG 442 MARTKQTARKSTGGKAPRKQLA+KA A +TGGVKKPHR++PGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFK+DLRFQSSA+ ALQE+ EAYLV LFEDTNLCAIHAKRVTI KD+QLARR+RG Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAWNTLATATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDMQLARRIRG 133
BLAST of CX297751 vs. ExPASy Swiss-Prot
Match: H33L2_CAEEL (Histone H3.3-like type 2 OS=Caenorhabditis elegans GN=his-74 PE=2 SV=3) HSP 1 Score: 223.787 bits (569), Expect = 4.918e-58 Identity = 114/133 (85.71%), Postives = 124/133 (93.23%), Query Frame = 2 Query: 44 MARTKQTARKSTGGKAPRKQLASKAARKAAPSTGGVKKPHRYKPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQSSAIGALQESVEAYLVSLFEDTNLCAIHAKRVTIQSKDIQLARRLRG 442 MARTKQTARKSTGGKAPRK LA+KAARK+A TG VKK HR++PGTVALREIRRYQKSTELL+RKLPFQRLVREIAQDFK+DLRFQS+AIGALQE+ EAYLV LFEDTNLCAIHAKRVTI KD+QLARR+RG Sbjct: 1 MARTKQTARKSTGGKAPRKALATKAARKSAIVTGSVKKVHRFRPGTVALREIRRYQKSTELLLRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDMQLARRIRG 133
BLAST of CX297751 vs. ExPASy Swiss-Prot
Match: H3L1_ARATH (Histone H3-like 1 OS=Arabidopsis thaliana GN=At1g13370 PE=2 SV=3) HSP 1 Score: 221.476 bits (563), Expect = 2.441e-57 Identity = 111/132 (84.09%), Postives = 123/132 (93.18%), Query Frame = 2 Query: 44 MARTKQTARKSTGGKAPRKQLASKAARKAAPSTGGVKKPHRYKPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQSSAIGALQESVEAYLVSLFEDTNLCAIHAKRVTIQSKDIQLARRLR 439 MARTKQ+ARKS GGKAP KQLA+KAARK+AP+TGGVKKPHR++PGTVALREIR+YQKSTELL RKLPFQRLVREIAQDFK+DLRFQS A+ ALQE+ EAYLV LFEDTNLCAIHAKRVTI KD+QLARR+R Sbjct: 1 MARTKQSARKSHGGKAPTKQLATKAARKSAPTTGGVKKPHRFRPGTVALREIRKYQKSTELLNRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDVQLARRIR 132
BLAST of CX297751 vs. ExPASy Swiss-Prot
Match: H3_EUPCR (Histone H3 OS=Euplotes crassus PE=3 SV=3) HSP 1 Score: 220.705 bits (561), Expect = 4.163e-57 Identity = 110/133 (82.71%), Postives = 121/133 (90.98%), Query Frame = 2 Query: 44 MARTKQTARKSTGGKAPRKQLASKAARKAAPSTGGVKKPHRYKPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQSSAIGALQESVEAYLVSLFEDTNLCAIHAKRVTIQSKDIQLARRLRG 442 MARTKQTARK+ GGKAPRK + K+ARK A +T G+KKPHRY+PGTVALREIRRYQKSTELLIRKLPFQRLVREIAQ+FK DLRFQSSA+ ALQE+ EAYLVSLFEDTNLCAIHAKRVTI KD+QLARR+RG Sbjct: 1 MARTKQTARKNVGGKAPRKHIGQKSARKTASTTAGMKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQEFKGDLRFQSSAVLALQEAAEAYLVSLFEDTNLCAIHAKRVTIMPKDMQLARRIRG 133
BLAST of CX297751 vs. ExPASy Swiss-Prot
Match: H33B_LILLO (Histone H3.3b OS=Lilium longiflorum GN=soH3-1 PE=2 SV=3) HSP 1 Score: 218.394 bits (555), Expect = 2.066e-56 Identity = 111/134 (82.84%), Postives = 123/134 (91.79%), Query Frame = 2 Query: 44 MARTKQTARKSTGGKAPRKQLASKAARKAAPS-TGGVKKPHRYKPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQSSAIGALQESVEAYLVSLFEDTNLCAIHAKRVTIQSKDIQLARRLRG 442 MARTKQTARKSTGGKAPRKQLA+KAARK+ P+ GG+K+P RY+PGTVALREIR+YQKSTELLIRKLPFQRLVREIAQD+K+DLRFQS A+ ALQE EAYLV +FEDTNLCAIHAKRVTI KDIQLARR+RG Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSIPTGMGGMKRPRRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDYKTDLRFQSHAVLALQEGAEAYLVGIFEDTNLCAIHAKRVTIMPKDIQLARRIRG 134
BLAST of CX297751 vs. ExPASy Swiss-Prot
Match: H3L2_ARATH (Histone H3-like 2 OS=Arabidopsis thaliana GN=MGH3 PE=2 SV=3) HSP 1 Score: 215.698 bits (548), Expect = 1.339e-55 Identity = 111/134 (82.84%), Postives = 121/134 (90.30%), Query Frame = 2 Query: 44 MARTKQTARKSTGGKAPRKQLASKAARKAA-PSTGGVKKPHRYKPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQSSAIGALQESVEAYLVSLFEDTNLCAIHAKRVTIQSKDIQLARRLRG 442 MARTKQTARKSTGGK PRK+LA+KAARK P GGVK+ HR++PGTVALREIR+YQKST+LLIRKLPFQRLVREIAQDFK DLRFQS A+ ALQE+ EAYLV LFEDTNLCAIHAKRVTI SKDIQLARR+RG Sbjct: 1 MARTKQTARKSTGGKGPRKELATKAARKTRRPYRGGVKRAHRFRPGTVALREIRKYQKSTDLLIRKLPFQRLVREIAQDFKVDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMSKDIQLARRIRG 134
BLAST of CX297751 vs. ExPASy Swiss-Prot
Match: H33_TETPY (Histone H3.3 OS=Tetrahymena pyriformis PE=1 SV=2) HSP 1 Score: 215.312 bits (547), Expect = 1.749e-55 Identity = 106/133 (79.70%), Postives = 124/133 (93.23%), Query Frame = 2 Query: 44 MARTKQTARKSTGGKAPRKQLASKAARKAAPSTGGVKKPHRYKPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQSSAIGALQESVEAYLVSLFEDTNLCAIHAKRVTIQSKDIQLARRLRG 442 MARTKQTARKSTG KAPRKQLA+KAARK+AP +GGVKKPH+++PGTVALREIR+YQK+T+LLIRKLPFQRLVR+IA + K+D+RFQS AI ALQE+ EAYLV LFEDTNLCAIHA+RVTI +KD+QLARR+RG Sbjct: 1 MARTKQTARKSTGVKAPRKQLATKAARKSAPVSGGVKKPHKFRPGTVALREIRKYQKTTDLLIRKLPFQRLVRDIAMEMKNDIRFQSQAILALQEAAEAYLVGLFEDTNLCAIHARRVTIMTKDMQLARRIRG 133 The following BLAST results are available for this feature:
BLAST of CX297751 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 212
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Sequences
The
following sequences are available for this feature:
EST sequence >CX297751 ID=CX297751; Name=CX297751; organism=Citrus clementina; type=EST; length=585bpback to top |