CX297751

Overview
NameCX297751
Unique NameCX297751
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length585
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX297751 vs. ExPASy Swiss-Prot
Match: H33_PICGU (Histone H3.3 OS=Pichia guilliermondii GN=HHT3 PE=3 SV=1)

HSP 1 Score: 249.21 bits (635), Expect = 1.093e-65
Identity = 128/133 (96.24%), Postives = 131/133 (98.50%), Query Frame = 2 
Query:   44 MARTKQTARKSTGGKAPRKQLASKAARKAAPSTGGVKKPHRYKPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQSSAIGALQESVEAYLVSLFEDTNLCAIHAKRVTIQSKDIQLARRLRG 442
            MARTKQTARKSTGGKAPRKQLASKAARK+AP TGGVKKPHRYKPGTVALREIRR+QKSTELLIRKLPFQRLVREIAQDFKSDLRFQSSAIGALQE+VEAYLVSLFEDTNLCAIHAKRVTIQ KDIQLARRLRG
Sbjct:    1 MARTKQTARKSTGGKAPRKQLASKAARKSAPVTGGVKKPHRYKPGTVALREIRRFQKSTELLIRKLPFQRLVREIAQDFKSDLRFQSSAIGALQEAVEAYLVSLFEDTNLCAIHAKRVTIQKKDIQLARRLRG 133
[Close]
BLAST of CX297751 vs. ExPASy Swiss-Prot
Match: H31_LODEL (Histone H3.1/H3.2 OS=Lodderomyces elongisporus GN=HHT1 PE=3 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 1.428e-65
Identity = 127/133 (95.49%), Postives = 131/133 (98.50%), Query Frame = 2 
Query:   44 MARTKQTARKSTGGKAPRKQLASKAARKAAPSTGGVKKPHRYKPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQSSAIGALQESVEAYLVSLFEDTNLCAIHAKRVTIQSKDIQLARRLRG 442
            MARTKQTARKSTGGKAPRKQLASKAARK+APSTGGVKKPHRYKPGTVALREIRR+QKSTELLIRKLPFQRLVREIAQDFK+DLRFQSSAIGALQE+VEAYLV LFEDTNLCAIHAKRVTIQ KDIQLARRLRG
Sbjct:    1 MARTKQTARKSTGGKAPRKQLASKAARKSAPSTGGVKKPHRYKPGTVALREIRRFQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAIGALQEAVEAYLVGLFEDTNLCAIHAKRVTIQKKDIQLARRLRG 133
[Close]
BLAST of CX297751 vs. ExPASy Swiss-Prot
Match: H33_PICST (Histone H3.3 OS=Pichia stipitis GN=HHT3 PE=3 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 3.180e-65
Identity = 127/133 (95.49%), Postives = 131/133 (98.50%), Query Frame = 2 
Query:   44 MARTKQTARKSTGGKAPRKQLASKAARKAAPSTGGVKKPHRYKPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQSSAIGALQESVEAYLVSLFEDTNLCAIHAKRVTIQSKDIQLARRLRG 442
            MARTKQTARKSTGGKAPRKQLASKAARK+AP +GGVKKPHRYKPGTVALREIRR+QKSTELLIRKLPFQRLVREIAQDFKSDLRFQSSAIGALQE+VEAYLVSLFEDTNLCAIHAKRVTIQ KDIQLARRLRG
Sbjct:    1 MARTKQTARKSTGGKAPRKQLASKAARKSAPVSGGVKKPHRYKPGTVALREIRRFQKSTELLIRKLPFQRLVREIAQDFKSDLRFQSSAIGALQEAVEAYLVSLFEDTNLCAIHAKRVTIQKKDIQLARRLRG 133
[Close]
BLAST of CX297751 vs. ExPASy Swiss-Prot
Match: H33_DEBHA (Histone H3.3 OS=Debaryomyces hansenii GN=HHT3 PE=3 SV=3)

HSP 1 Score: 247.669 bits (631), Expect = 3.180e-65
Identity = 127/133 (95.49%), Postives = 131/133 (98.50%), Query Frame = 2 
Query:   44 MARTKQTARKSTGGKAPRKQLASKAARKAAPSTGGVKKPHRYKPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQSSAIGALQESVEAYLVSLFEDTNLCAIHAKRVTIQSKDIQLARRLRG 442
            MARTKQTARKSTGGKAPRKQLASKAARK+AP +GGVKKPHRYKPGTVALREIRR+QKSTELLIRKLPFQRLVREIAQDFKSDLRFQSSAIGALQE+VEAYLVSLFEDTNLCAIHAKRVTIQ KDIQLARRLRG
Sbjct:    1 MARTKQTARKSTGGKAPRKQLASKAARKSAPVSGGVKKPHRYKPGTVALREIRRFQKSTELLIRKLPFQRLVREIAQDFKSDLRFQSSAIGALQEAVEAYLVSLFEDTNLCAIHAKRVTIQKKDIQLARRLRG 133
[Close]
BLAST of CX297751 vs. ExPASy Swiss-Prot
Match: H31_SCHPO (Histone H3.1/H3.2 OS=Schizosaccharomyces pombe GN=hht1 PE=1 SV=2)

HSP 1 Score: 247.669 bits (631), Expect = 3.180e-65
Identity = 126/133 (94.74%), Postives = 131/133 (98.50%), Query Frame = 2 
Query:   44 MARTKQTARKSTGGKAPRKQLASKAARKAAPSTGGVKKPHRYKPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQSSAIGALQESVEAYLVSLFEDTNLCAIHAKRVTIQSKDIQLARRLRG 442
            MARTKQTARKSTGGKAPRKQLASKAARKAAP+TGGVKKPHRY+PGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFK+DLRFQSSAIGALQE+VEAYLVSLFEDTNLCAIH KRVTIQ KD+QLARRLRG
Sbjct:    1 MARTKQTARKSTGGKAPRKQLASKAARKAAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAIGALQEAVEAYLVSLFEDTNLCAIHGKRVTIQPKDMQLARRLRG 133
[Close]
BLAST of CX297751 vs. ExPASy Swiss-Prot
Match: H31_CANAL (Histone H3.1/H3.2 OS=Candida albicans GN=HHT1 PE=3 SV=3)

HSP 1 Score: 247.669 bits (631), Expect = 3.180e-65
Identity = 126/133 (94.74%), Postives = 131/133 (98.50%), Query Frame = 2 
Query:   44 MARTKQTARKSTGGKAPRKQLASKAARKAAPSTGGVKKPHRYKPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQSSAIGALQESVEAYLVSLFEDTNLCAIHAKRVTIQSKDIQLARRLRG 442
            MARTKQTARKSTGGKAPRKQLASKAARK+APSTGGVKKPHRYKPGTVALREIRR+QKSTELLIRKLPFQRLVREIAQDFK+DLRFQSSAIGALQE+VEAYLV LFEDTNLCAIHAKRVTIQ KD+QLARRLRG
Sbjct:    1 MARTKQTARKSTGGKAPRKQLASKAARKSAPSTGGVKKPHRYKPGTVALREIRRFQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAIGALQEAVEAYLVGLFEDTNLCAIHAKRVTIQKKDMQLARRLRG 133
[Close]
BLAST of CX297751 vs. ExPASy Swiss-Prot
Match: H3_ZYGBA (Histone H3 OS=Zygosaccharomyces bailii GN=HHT1 PE=1 SV=2)

HSP 1 Score: 246.514 bits (628), Expect = 7.085e-65
Identity = 127/133 (95.49%), Postives = 131/133 (98.50%), Query Frame = 2 
Query:   44 MARTKQTARKSTGGKAPRKQLASKAARKAAPSTGGVKKPHRYKPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQSSAIGALQESVEAYLVSLFEDTNLCAIHAKRVTIQSKDIQLARRLRG 442
            MARTKQTARKSTGGKAPRKQLASKAARK+APSTGGVKKPHRYKPGTVALREIRR+QKSTELLIRKLPFQRLVREIAQDFK+DLRFQSSAIGALQESVEAYLVSLFEDTNL AIHAKRVTIQ KDI+LARRLRG
Sbjct:    1 MARTKQTARKSTGGKAPRKQLASKAARKSAPSTGGVKKPHRYKPGTVALREIRRFQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAIGALQESVEAYLVSLFEDTNLAAIHAKRVTIQKKDIKLARRLRG 133
[Close]
BLAST of CX297751 vs. ExPASy Swiss-Prot
Match: H3_YEAST (Histone H3 OS=Saccharomyces cerevisiae GN=HHT1 PE=1 SV=2)

HSP 1 Score: 246.514 bits (628), Expect = 7.085e-65
Identity = 127/133 (95.49%), Postives = 131/133 (98.50%), Query Frame = 2 
Query:   44 MARTKQTARKSTGGKAPRKQLASKAARKAAPSTGGVKKPHRYKPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQSSAIGALQESVEAYLVSLFEDTNLCAIHAKRVTIQSKDIQLARRLRG 442
            MARTKQTARKSTGGKAPRKQLASKAARK+APSTGGVKKPHRYKPGTVALREIRR+QKSTELLIRKLPFQRLVREIAQDFK+DLRFQSSAIGALQESVEAYLVSLFEDTNL AIHAKRVTIQ KDI+LARRLRG
Sbjct:    1 MARTKQTARKSTGGKAPRKQLASKAARKSAPSTGGVKKPHRYKPGTVALREIRRFQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAIGALQESVEAYLVSLFEDTNLAAIHAKRVTIQKKDIKLARRLRG 133
[Close]
BLAST of CX297751 vs. ExPASy Swiss-Prot
Match: H3_KLULA (Histone H3 OS=Kluyveromyces lactis GN=HHT1 PE=3 SV=2)

HSP 1 Score: 246.514 bits (628), Expect = 7.085e-65
Identity = 127/133 (95.49%), Postives = 131/133 (98.50%), Query Frame = 2 
Query:   44 MARTKQTARKSTGGKAPRKQLASKAARKAAPSTGGVKKPHRYKPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQSSAIGALQESVEAYLVSLFEDTNLCAIHAKRVTIQSKDIQLARRLRG 442
            MARTKQTARKSTGGKAPRKQLASKAARK+APSTGGVKKPHRYKPGTVALREIRR+QKSTELLIRKLPFQRLVREIAQDFK+DLRFQSSAIGALQESVEAYLVSLFEDTNL AIHAKRVTIQ KDI+LARRLRG
Sbjct:    1 MARTKQTARKSTGGKAPRKQLASKAARKSAPSTGGVKKPHRYKPGTVALREIRRFQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAIGALQESVEAYLVSLFEDTNLAAIHAKRVTIQKKDIKLARRLRG 133
[Close]
BLAST of CX297751 vs. ExPASy Swiss-Prot
Match: H3_CANGA (Histone H3 OS=Candida glabrata GN=HHT1 PE=3 SV=2)

HSP 1 Score: 246.514 bits (628), Expect = 7.085e-65
Identity = 127/133 (95.49%), Postives = 131/133 (98.50%), Query Frame = 2 
Query:   44 MARTKQTARKSTGGKAPRKQLASKAARKAAPSTGGVKKPHRYKPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQSSAIGALQESVEAYLVSLFEDTNLCAIHAKRVTIQSKDIQLARRLRG 442
            MARTKQTARKSTGGKAPRKQLASKAARK+APSTGGVKKPHRYKPGTVALREIRR+QKSTELLIRKLPFQRLVREIAQDFK+DLRFQSSAIGALQESVEAYLVSLFEDTNL AIHAKRVTIQ KDI+LARRLRG
Sbjct:    1 MARTKQTARKSTGGKAPRKQLASKAARKSAPSTGGVKKPHRYKPGTVALREIRRFQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAIGALQESVEAYLVSLFEDTNLAAIHAKRVTIQKKDIKLARRLRG 133
The following BLAST results are available for this feature:
BLAST of CX297751 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 212
Match NameE-valueIdentityDescription
H33_PICGU1.093e-6596.24Histone H3.3 OS=Pichia guilliermondii GN=HHT3 PE=3... [more]
H31_LODEL1.428e-6595.49Histone H3.1/H3.2 OS=Lodderomyces elongisporus GN=... [more]
H33_PICST3.180e-6595.49Histone H3.3 OS=Pichia stipitis GN=HHT3 PE=3 SV=1[more]
H33_DEBHA3.180e-6595.49Histone H3.3 OS=Debaryomyces hansenii GN=HHT3 PE=3... [more]
H31_SCHPO3.180e-6594.74Histone H3.1/H3.2 OS=Schizosaccharomyces pombe GN=... [more]
H31_CANAL3.180e-6594.74Histone H3.1/H3.2 OS=Candida albicans GN=HHT1 PE=3... [more]
H3_ZYGBA7.085e-6595.49Histone H3 OS=Zygosaccharomyces bailii GN=HHT1 PE=... [more]
H3_YEAST7.085e-6595.49Histone H3 OS=Saccharomyces cerevisiae GN=HHT1 PE=... [more]
H3_KLULA7.085e-6595.49Histone H3 OS=Kluyveromyces lactis GN=HHT1 PE=3 SV... [more]
H3_CANGA7.085e-6595.49Histone H3 OS=Candida glabrata GN=HHT1 PE=3 SV=2[more]

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Properties
Property NameValue
Genbank descriptionC06004H02SK RindPdig24 Citrus clementina cDNA clone C06004H02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX297751 ID=CX297751; Name=CX297751; organism=Citrus clementina; type=EST; length=585bp
TTTCATCACAAAAACACTTTTTTCATCAAGTCTATCATCCAAGATGGCTC
GTACCAAGCAGACTGCCCGTAAGTCCACTGGTGGCAAGGCTCCCCGTAAG
CAGCTCGCTTCCAAGGCCGCCCGCAAGGCCGCCCCCTCCACCGGAGGTGT
CAAGAAGCCCCACCGCTACAAGCCCGGTACCGTCGCTCTTCGCGAGATTC
GCCGCTACCAGAAGTCCACTGAGCTTTTGATTCGCAAGCTTCCCTTCCAG
CGTCTGGTCCGTGAGATCGCCCAGGACTTCAAGTCCGATCTCCGCTTCCA
GTCCTCTGCCATCGGTGCTCTCCAGGAGTCCGTTGAGGCCTACCTCGTCT
CTCTCTTCGAAGACACCAACCTCTGCGCTATCCACGCCAAGCGTGTCACC
ATCCAGTCCAAGGACATCCAGTTGGCCCGCCGTCTCCGTGGCGAGCGCTC
GTAATTTTTCTTTTCAACGAGCTGGTTTTCTGAAAGGCGATCATGGGGTT
TGTTTTTATCTTTTTATCATGACTACTGGCGATACATGATGGGTTTGCTT
TCAAATATCAATGGGTTTCGGCACCGGGTTGCCTC
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