CX297760

Overview
NameCX297760
Unique NameCX297760
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length688
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX297760 vs. ExPASy Swiss-Prot
Match: Y1341_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g34110 OS=Arabidopsis thaliana GN=At1g34110 PE=2 SV=2)

HSP 1 Score: 142.51 bits (358), Expect = 1.997e-33
Identity = 83/228 (36.40%), Postives = 133/228 (58.33%), Query Frame = 2
Query:    5 IGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV--DVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRXXXXXXXXXXXXXXXXXREKRLDAIVDRNLN--KNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRML-EGEGLAERW 673
            +G+C+  + +LL+Y +  N +    L+++  G   LDW TR ++A+GAA+GL YLH  C P I+HRDVK  N+LLD  +EA++ DFGLAKL+       N  ++V G+ G+IAPEY  T   +E++DV+ YG++LLE+++G+ A++  +                  E  L +++D  L    +  +QE+   + +A+ C   SP +RP M EVV +L E +   E W
Sbjct:  838 LGYCSNKSVKLLLYNYFPNGN----LQQLLQGNRNLDWETRYKIAIGAAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAILADFGLAKLMMNSPNYHNAMSRVAGSYGYIAPEYGYTMNITEKSDVYSYGVVLLEILSGRSAVE-PQIGDGLHIVEWVKKKMGTFEPAL-SVLDVKLQGLPDQIVQEMLQTLGIAMFCVNPSPVERPTMKEVVTLLMEVKCSPEEW 1059          
BLAST of CX297760 vs. ExPASy Swiss-Prot
Match: PEPR2_ARATH (Leucine-rich repeat receptor-like protein kinase PEPR2 OS=Arabidopsis thaliana GN=PEPR2 PE=1 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 1.997e-33
Identity = 87/210 (41.43%), Postives = 118/210 (56.19%), Query Frame = 2
Query:   35 LLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAID--FSRXXXXXXXXXXXXXXXXXREKRLDAIVDRNL-NKNYNIQEVETMIQV---ALLCTQASPEDRPAMSEVVRML 646
            L++Y +M N S+   L     GE VLDW  R  +ALG + GL YLH  C+P IIHRD+K  N+L+D D E  +GDFGLA+++D   T  T  V GT G+IAPE       S+ +DV+ YG++LLELVTG+RA+D  F                    +     IVD  L ++  + +  E  IQV   AL CT   PE+RP+M +VV+ L
Sbjct:  865 LMLYQYMPNGSLHDVLHRGNQGEAVLDWSARFNIALGISHGLAYLHHDCHPPIIHRDIKPENILMDSDMEPHIGDFGLARILD-DSTVSTATVTGTTGYIAPENAYKTVRSKESDVYSYGVVLLELVTGKRALDRSFPEDINIVSWVRSVLSSYEDEDDTAGPIVDPKLVDELLDTKLREQAIQVTDLALRCTDKRPENRPSMRDVVKDL 1073          
BLAST of CX297760 vs. ExPASy Swiss-Prot
Match: CRK20_ARATH (Putative cysteine-rich receptor-like protein kinase 20 OS=Arabidopsis thaliana GN=CRK20 PE=2 SV=2)

HSP 1 Score: 142.51 bits (358), Expect = 1.997e-33
Identity = 79/221 (35.75%), Postives = 120/221 (54.30%), Query Frame = 2
Query:    5 IGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTT-QVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRXXXXXXXXXXXXXXXXXREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGEGLA 664
            +G+C    E++LVY F+ N S+ Y L +    +  LDW  R ++  G ARG+ YLH+     IIHRD+KA N+LLD D    V DFG+A++  + +T   T +V GT G++APEY   GK S ++DV+ +G+++LE+V+G +     +                      + +VD +   NY   E+   I +ALLC Q    DRP MS +V+ML    +A
Sbjct:  404 LGYCLEGEEKILVYEFVPNKSLDYFLFD-PTMQGQLDWSRRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLDADMNPKVADFGMARIFGMDQTEANTRRVVGTYGYMAPEYAMYGKFSMKSDVYSFGVLVLEIVSGMKNSSLDQMDGSISNLVTYTWRLWSNGSPSE-LVDPSFGDNYQTSEITRCIHIALLCVQEDANDRPTMSAIVQMLTTSSIA 622          
BLAST of CX297760 vs. ExPASy Swiss-Prot
Match: Y5148_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g61480 OS=Arabidopsis thaliana GN=At5g61480 PE=1 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.608e-33
Identity = 74/218 (33.94%), Postives = 134/218 (61.47%), Query Frame = 2
Query:    5 IGFCTTPTERLLVYPFMQNLSVAYRLRE-IKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRXXXXXXXXXXXXXXXXXREKRLDAIVDRNLNKNYNI--QEVETMIQVALLCTQASPEDRPAMSEVVRMLE 649
            +G CT     +L+Y +M N S+   L    K      +W    ++A+G A+G+ YLH  C+P I+HRD+K +N+LLD DFEA V DFG+AKL+   ++   + V G+ G+IAPEY  T +  +++D++ YG++LLE++TG+R+++                     ++ ++ ++D+++ ++ ++  +E++ M+++ALLCT  SP DRP M +V+ +L+
Sbjct:  785 LGCCTNRDCTMLLYEYMPNGSLDDLLHGGDKTMTAAAEWTALYQIAIGVAQGICYLHHDCDPVIVHRDLKPSNILLDADFEARVADFGVAKLIQTDES--MSVVAGSYGYIAPEYAYTLQVDKKSDIYSYGVILLEIITGKRSVE--PEFGEGNSIVDWVRSKLKTKEDVEEVLDKSMGRSCSLIREEMKQMLRIALLCTSRSPTDRPPMRDVLLILQ 998          
BLAST of CX297760 vs. ExPASy Swiss-Prot
Match: WAK4_ARATH (Wall-associated receptor kinase 4 OS=Arabidopsis thaliana GN=WAK4 PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.608e-33
Identity = 78/226 (34.51%), Postives = 128/226 (56.64%), Query Frame = 2
Query:    5 IGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRXXXXXXXXXXXXXXXXXREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGEGLAERWEEW 682
            +G C      LLVY F+ + ++   L      +  L W  R R+A+  A  L YLH   +  IIHRD+K AN+LLDE+  A V DFG ++L+ + K ++ T V+GT+G++ PEY +TG  +E++DV+ +G++L+EL++GQ+A+ F R                 +E RL  I+D  +    N +E++   ++A+ CT+ + E+RP M EV   LE   + +   +W
Sbjct:  470 LGCCLETEVPLLVYEFISSGTLFDHLHG-SMFDSSLTWEHRLRMAVEIAGTLAYLHSSASIPIIHRDIKTANILLDENLTAKVADFGASRLIPMDKEDLATMVQGTLGYLDPEYYNTGLLNEKSDVYSFGVVLMELLSGQKALCFER--PQTSKHIVSYFASATKENRLHEIIDGQVMNENNQREIQKAARIAVECTRLTGEERPGMKEVAAELEALRVTKTKHKW 692          
BLAST of CX297760 vs. ExPASy Swiss-Prot
Match: RKF3_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RKF3 OS=Arabidopsis thaliana GN=RKF3 PE=1 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.608e-33
Identity = 84/219 (38.36%), Postives = 126/219 (57.53%), Query Frame = 2
Query:    8 GFCTTPT-----ERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRXXXXXXXXXXXXXXXXXREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLE 649
            G+CT  T     +R++V   + N S+   L      E  L W  R+R+ALG ARGL YLH    P IIHRD+KA+N+LLDE FEA V DFGLAK      T+++T+V GTMG++APEY   G+ +E++DV+ +G++LLEL++ ++AI                     RE +   +V+  + +    + +E  + +A+LC+      RP M +VV+MLE
Sbjct:  344 GYCTATTPYEGHQRIIVCDLVSNGSLHDHL--FGDLEAQLAWPLRQRIALGMARGLAYLHYGAQPSIIHRDIKASNILLDERFEAKVADFGLAKFNPEGMTHMSTRVAGTMGYVAPEYALYGQLTEKSDVYSFGVVLLELLSRRKAI--VTDEEGQPVSVADWAWSLVREGQTLDVVEDGMPEKGPPEVLEKYVLIAVLCSHPQLHARPTMDQVVKMLE 558          
BLAST of CX297760 vs. ExPASy Swiss-Prot
Match: CRK35_ARATH (Putative cysteine-rich receptor-like protein kinase 35 OS=Arabidopsis thaliana GN=CRK35 PE=3 SV=2)

HSP 1 Score: 142.124 bits (357), Expect = 2.608e-33
Identity = 76/216 (35.19%), Postives = 120/216 (55.56%), Query Frame = 2
Query:    5 IGFCTTPTERLLVYPFMQNLSVAYRLRE-IKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTT-QVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRXXXXXXXXXXXXXXXXXREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRML 646
            +GFC    E++LVY F+ N S+ Y L +  K GE  LDW  R  +  G ARG+ YLH+     IIHRD+KA+N+LLD D    + DFG+A++  V ++   T ++ GT G+++PEY   G  S ++DV+ +G+++LE+++G++   F                       L+ +VD  + ++Y   E    I +ALLC Q  P DRP +  ++ ML
Sbjct:  405 LGFCLEGEEKILVYEFVPNKSLDYFLFDPAKQGE--LDWTRRYNIIGGIARGILYLHQDSRLTIIHRDLKASNILLDADMNPKIADFGMARIFGVDQSQANTRRIAGTFGYMSPEYAMRGHFSMKSDVYSFGVLVLEIISGKKNSSFYNIDDSGSNLVTHAWRLWRNGSPLE-LVDPTIGESYQSSEATRCIHIALLCVQEDPADRPLLPAIIMML 617          
BLAST of CX297760 vs. ExPASy Swiss-Prot
Match: CRK13_ARATH (Cysteine-rich receptor-like protein kinase 13 OS=Arabidopsis thaliana GN=CRK13 PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.608e-33
Identity = 80/221 (36.20%), Postives = 119/221 (53.85%), Query Frame = 2
Query:    5 IGFCTTPTERLLVYPFMQNLSVAYRLRE-IKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV-RKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRXXXXXXXXXXXXXXXXXREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGEGL 661
            +GF     E+++VY ++ N S+ Y L +  K GE  LDW  R ++  G ARG+ YLH+   P IIHRD+KA N+LLD      V DFG A++  + +   +T    GT G++APEY+  G+ S ++DV+ YG+++LE++ G+R   FS                         +VD  + +NY  +EV   I +ALLC Q  P DRP  S ++ ML    L
Sbjct:  418 LGFSVKGEEKIIVYEYLPNRSLDYILFDPTKQGE--LDWKKRYKIIGGTARGILYLHQDSQPTIIHRDLKAGNILLDAHMNPKVADFGTARIFGMDQSVAITANAAGTPGYMAPEYMELGEFSMKSDVYSYGVLVLEIICGKRNTSFSSPVQNFVTYVWRLWKSGTPLN----LVDATIAENYKSEEVIRCIHIALLCVQEEPTDRPDFSIIMSMLTSNSL 632          
BLAST of CX297760 vs. ExPASy Swiss-Prot
Match: PEPR1_ARATH (Leucine-rich repeat receptor-like protein kinase PEPR1 OS=Arabidopsis thaliana GN=PEPR1 PE=1 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 3.407e-33
Identity = 85/222 (38.29%), Postives = 117/222 (52.70%), Query Frame = 2
Query:    8 GFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRXXXXXXXXXXXXXXXXXREKRLDAI--------VDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLE 649
            GF     + L++Y +M   S+   L  + P E VLDW  R  VALG A GL YLH  C+P I+HRD+K  N+L+D D E  +GDFGLA+L+D   T  T  V GT G+IAPE          +DV+ YG++LLELVT +RA+D S                       D +        VD  L+ +   ++V  + ++AL CTQ  P  RP M + V++LE
Sbjct:  889 GFWLRKDDGLMLYRYMPKGSLYDVLHGVSPKENVLDWSARYNVALGVAHGLAYLHYDCHPPIVHRDIKPENILMDSDLEPHIGDFGLARLLD-DSTVSTATVTGTTGYIAPENAFKTVRGRESDVYSYGVVLLELVTRKRAVDKSFPESTDIVSWVRSALSSSNNNVEDMVTTIVDPILVDELLDSSLR-EQVMQVTELALSCTQQDPAMRPTMRDAVKLLE 1108          
BLAST of CX297760 vs. ExPASy Swiss-Prot
Match: CRK39_ARATH (Putative cysteine-rich receptor-like protein kinase 39 OS=Arabidopsis thaliana GN=CRK39 PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 3.407e-33
Identity = 83/218 (38.07%), Postives = 124/218 (56.88%), Query Frame = 2
Query:    5 IGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNV-TTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRXXXXXXXXXXXXXXXXXREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 655
            +GFC    E++LVY F+ N S+ + + + +    +L W  R R+  G ARGL YLHE    KIIHRD+KA+N+LLD +    V DFG A+L D  +T   T ++ GT G++APEYL+ G+ S ++DV+ +G+MLLE+++G+R   F                    E + + I+D  L +     E+  +IQ+ LLC Q +P  RP MS V+  L  E
Sbjct:  413 LGFCNEGDEQILVYEFVPNSSLDHFIFDDEK-RSLLTWEMRYRIIEGIARGLLYLHEDSQLKIIHRDLKASNILLDAEMNPKVADFGTARLFDSDETRAETKRIAGTRGYMAPEYLNHGQISAKSDVYSFGVMLLEMISGERNNSFEGEGLAAFAWKRWV------EGKPEIIIDPFLIEKPR-NEIIKLIQIGLLCVQENPTKRPTMSSVIIWLGSE 622          
The following BLAST results are available for this feature:
BLAST of CX297760 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 316
Match NameE-valueIdentityDescription
Y1341_ARATH1.997e-3336.40Probable LRR receptor-like serine/threonine-protei... [more]
PEPR2_ARATH1.997e-3341.43Leucine-rich repeat receptor-like protein kinase P... [more]
CRK20_ARATH1.997e-3335.75Putative cysteine-rich receptor-like protein kinas... [more]
Y5148_ARATH2.608e-3333.94Probable leucine-rich repeat receptor-like protein... [more]
WAK4_ARATH2.608e-3334.51Wall-associated receptor kinase 4 OS=Arabidopsis t... [more]
RKF3_ARATH2.608e-3338.36Probable LRR receptor-like serine/threonine-protei... [more]
CRK35_ARATH2.608e-3335.19Putative cysteine-rich receptor-like protein kinas... [more]
CRK13_ARATH2.608e-3336.20Cysteine-rich receptor-like protein kinase 13 OS=A... [more]
PEPR1_ARATH3.407e-3338.29Leucine-rich repeat receptor-like protein kinase P... [more]
CRK39_ARATH3.407e-3338.07Putative cysteine-rich receptor-like protein kinas... [more]

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Properties
Property NameValue
Genbank descriptionC06004H11SK RindPdig24 Citrus clementina cDNA clone C06004H11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX297760 ID=CX297760; Name=CX297760; organism=Citrus clementina; type=EST; length=688bp
GAGGATTGGATTTTGCACAACACCTACTGAACGTCTCTTGGTGTATCCAT
TTATGCAGAACTTGAGTGTAGCCTATCGCTTACGAGAAATTAAACCTGGA
GAGCCTGTTTTGGACTGGGTTACAAGAAAACGAGTGGCATTAGGTGCAGC
ACGTGGCCTGGAATATCTTCATGAGCATTGCAATCCTAAGATCATACATC
GGGATGTGAAGGCTGCAAATGTATTACTGGATGAAGATTTTGAAGCAGTT
GTTGGTGACTTTGGATTGGCAAAATTGGTGGACGTGAGAAAGACTAATGT
GACAACTCAAGTTCGTGGGACAATGGGCCACATAGCTCCTGAGTACTTGT
CCACTGGGAAATCATCAGAAAGGACAGATGTTTTTGGTTATGGGATTATG
CTTCTGGAGCTTGTAACAGGTCAAAGGGCAATTGACTTTTCACGTTTGGA
AGAAGAAGATGATGTCCTATTGCTTGACCATGTCAAGAAGCTAGAGAGAG
AGAAAAGGTTGGATGCTATTGTAGATCGCAACCTTAATAAGAATTACAAC
ATCCAAGAGGTGGAGACAATGATTCAAGTTGCACTGCTCTGCACACAAGC
ATCACCAGAGGACCGTCCAGCAATGTCAGAGGTGGTGCGGATGTTGGAAG
GAGAGGGTCTAGCTGAGAGGTGGGAAGAGTGGCAGCAT
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