CX297861

Overview
NameCX297861
Unique NameCX297861
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length684
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX297861 vs. ExPASy Swiss-Prot
Match: CDKF4_ORYSJ (Cyclin-dependent kinase F-4 OS=Oryza sativa subsp. japonica GN=CDKF-4 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.129e-12
Identity = 48/159 (30.19%), Postives = 87/159 (54.72%), Query Frame = 1
Query:  103 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYY 579
            R+K+++++G+GTFG V   ++++ GE VA+K ++  K Y       +  ++ L+R +      V+++      + +  + E +  +LY  L K+  +PF    VR    Q+ + +A+MH     H DLKPEN+L VS + +K+ D+ + AR  T V  Y
Sbjct:    3 RFKMIKEVGDGTFGSVWRAINKQNGEVVAVKKMKR-KYYSFEECMSLREVKSLRRMNH--PNIVKLKEVIRENDILYFIMEYMECNLYQ-LMKDRVKPFSEAEVRNWCFQIFQALAYMHQRGYFHRDLKPENLL-VSKDVIKLADFGL-AREVTSVPPY 155          
BLAST of CX297861 vs. ExPASy Swiss-Prot
Match: SNF1_CANAL (Carbon catabolite-derepressing protein kinase OS=Candida albicans GN=SNF1 PE=2 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.475e-12
Identity = 50/169 (29.59%), Postives = 86/169 (50.89%), Query Frame = 1
Query:   91 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMT-----EIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYK 582
            N   RY+IL+ +GEG+FG+V       TG+ VA+K++   K   ++ M      EI  L LL+         +++ +    ++ I +V E  G  L+D++ +      P D  R   +Q++  V + H  +++H DLKPEN+L      +KI D+ + +   TD N+ K
Sbjct:   48 NRIGRYQILKTLGEGSFGKVKLAQHLGTGQKVALKIINR-KTLAKSDMQGRVEREISYLRLLRH-----PHIIKLYDVIKSKDEIIMVIEFAGKELFDYIVQRG--KMPEDEARRFFQQIIAAVEYCHRHKIVHRDLKPENLLLDDQLNVKIADFGL-SNIMTDGNFLK 207          
BLAST of CX297861 vs. ExPASy Swiss-Prot
Match: MPK19_ARATH (Mitogen-activated protein kinase 19 OS=Arabidopsis thaliana GN=MPK19 PE=2 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.475e-12
Identity = 50/163 (30.67%), Postives = 85/163 (52.15%), Query Frame = 1
Query:  100 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAA---MTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGR----QLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTD 567
            +RY+IL  IG+G++G V   +D +TGE VAIK +  + ++   A   + E+ +L LL+  D    + + +         I +VFE++   L+  ++ N+      DL RE  +    Q+L  + +MH   + H DLKP+NIL  +   LK+ D+ +   S  D
Sbjct:   23 NRYRILEVIGKGSYGVVCAAIDTQTGEKVAIKKINDVFEHVSDALRILREVKLLRLLRHPDIVEIKSIMLPPSKREFKDIYVVFELMESDLHQVIKAND------DLTREHHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVSFND 179          
BLAST of CX297861 vs. ExPASy Swiss-Prot
Match: MPK18_ARATH (Mitogen-activated protein kinase 18 OS=Arabidopsis thaliana GN=MPK18 PE=1 SV=3)

HSP 1 Score: 73.1738 bits (178), Expect = 1.475e-12
Identity = 49/154 (31.82%), Postives = 81/154 (52.60%), Query Frame = 1
Query:  100 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAA---MTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGR----QLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDY 540
            +RY+IL  IG+G++G V   +D  TGE VAIK +  + ++   A   + E+ +L LL+  D    + + +         I +VFE++   L+  ++ N+      DL RE  +    Q+L  + FMH   + H DLKP+NIL  +   LK+ D+
Sbjct:   11 NRYRILEVIGKGSYGVVCAAIDTHTGEKVAIKKINDVFEHISDALRILREVKLLRLLRHPDIVEIKSIMLPPSKREFKDIYVVFELMESDLHQVIKAND------DLTREHHQFFLYQMLRALKFMHTANVYHRDLKPKNILANANCKLKVCDF 158          
BLAST of CX297861 vs. ExPASy Swiss-Prot
Match: SLK_RAT (STE20-like serine/threonine-protein kinase OS=Rattus norvegicus GN=Slk PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.927e-12
Identity = 44/152 (28.95%), Postives = 79/152 (51.97%), Query Frame = 1
Query:  106 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYR-EAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARS 558
            ++I+ ++G+G FG+V    ++ET    A KV+ +  +   E  M EID+L             V++ + F Y N++ I+ E       D +     RP     ++ + +Q LE + ++HD ++IH DLK  NILF     +K+ D+ V+A++
Sbjct:   34 WEIIGELGDGAFGKVYKAQNKETNVLAAAKVIDTKSEEELEDYMVEIDILASCDH-----PNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLEALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKN 180          
BLAST of CX297861 vs. ExPASy Swiss-Prot
Match: SLK_MOUSE (STE20-like serine/threonine-protein kinase OS=Mus musculus GN=Slk PE=1 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 1.927e-12
Identity = 44/152 (28.95%), Postives = 79/152 (51.97%), Query Frame = 1
Query:  106 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYR-EAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARS 558
            ++I+ ++G+G FG+V    ++ET    A KV+ +  +   E  M EID+L             V++ + F Y N++ I+ E       D +     RP     ++ + +Q LE + ++HD ++IH DLK  NILF     +K+ D+ V+A++
Sbjct:   34 WEIIGELGDGAFGKVYKAQNKETNVLAAAKVIDTKSEEELEDYMVEIDILASCDH-----PNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLEALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKN 180          
BLAST of CX297861 vs. ExPASy Swiss-Prot
Match: PHO85_ASHGO (Negative regulator of the PHO system OS=Ashbya gossypii GN=PHO85 PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.927e-12
Identity = 51/165 (30.91%), Postives = 84/165 (50.91%), Query Frame = 1
Query:  103 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR--SIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFP----VDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYY 579
            R+K L ++G GT+  V   L++ TG  VA+K V+  S +     A+ EI +++ LK         V++ +     N + +VFE +   L  F+     R  P    + LV+    QLL+ VAF H+ R++H DLKP+N+L  +   LK+ D+ +       VN +
Sbjct:    8 RFKQLERLGNGTYATVYKGLNKTTGLYVALKEVKLDSEEGTPSTAIREISLMKELKH-----ENIVRLYDVIHTENKLTLVFEFMDNDLKKFMDSRLDREMPRGLELSLVKYFQWQLLQGVAFCHENRILHRDLKPQNLLINNKGQLKLGDFGLARAFGIPVNTF 167          
BLAST of CX297861 vs. ExPASy Swiss-Prot
Match: PHO85_CANGA (Negative regulator of the PHO system OS=Candida glabrata GN=PHO85 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.516e-12
Identity = 50/167 (29.94%), Postives = 86/167 (51.50%), Query Frame = 1
Query:   97 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR--SIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRK----NNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYY 579
            +S++K L K+G GT+  V   L++ TG  VA+K V+  S +     A+ EI +++ LK         V++ +     N + +VFE +   L  ++      N  R   ++LV+    QLLE +AF H+ +++H DLKP+N+L      LK+ D+ +       VN +
Sbjct:    3 SSQFKQLEKLGNGTYATVYKGLNKSTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH-----DNIVRLYDVIHTENKLTLVFEYMDNDLKKYMDSRTVGNAPRGLEMNLVKYFQWQLLEGLAFCHENKILHRDLKPQNLLITKRGQLKLGDFGLARAFGIPVNTF 164          
BLAST of CX297861 vs. ExPASy Swiss-Prot
Match: KCC1_YEAST (Calcium/calmodulin-dependent protein kinase I OS=Saccharomyces cerevisiae GN=CMK1 PE=1 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 2.516e-12
Identity = 53/193 (27.46%), Postives = 95/193 (49.22%), Query Frame = 1
Query:   25 QNGTPQWRNDDKDGHYLFALGENLTSRYKIL--RKIGEGTFGQVLDCLDRETGETVAIKVV-----RSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYD-FLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFV---SPEYLKIPDYKVTARSPTD 567
            +  +P+   +D +G        +  ++ K +  + +G GTFG V    + ETGE VA+K++     +  K   EA   E+D+L+ L          V  ++WF+ ++   I+ ++  G  L+D  L+K  +     D VR I  ++L  V +MH   ++H DLKPEN+L++       L + D+ +  R  +D
Sbjct:    8 KESSPKQTEEDSEGKMAHVQPASYVNKKKYVFGKTLGAGTFGVVRQAKNTETGEDVAVKILIKKALKGNKVQLEALYDELDILQRLHH-----PNIVAFKDWFESKDKFYIITQLAKGGELFDRILKKGKFTE--EDAVR-ILVEILSAVKYMHSQNIVHRDLKPENLLYIDKSDESPLVVADFGIAKRLKSD 192          
BLAST of CX297861 vs. ExPASy Swiss-Prot
Match: SNF1_CANTR (Carbon catabolite-derepressing protein kinase OS=Candida tropicalis GN=SNF1 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.286e-12
Identity = 49/169 (28.99%), Postives = 86/169 (50.89%), Query Frame = 1
Query:   91 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMT-----EIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYK 582
            N   RY+I++ +GEG+FG+V       TG+ VA+K++   K   ++ M      EI  L LL+         +++ +    ++ I +V E  G  L+D++ +      P D  R   +Q++  V + H  +++H DLKPEN+L      +KI D+ + +   TD N+ K
Sbjct:   47 NRIGRYQIIKTLGEGSFGKVKLAQHVGTGQKVALKIINR-KTLAKSDMQGRVEREISYLRLLRH-----PHIIKLYDVIKSKDEIIMVIEFAGKELFDYIVQRG--KMPEDEARRFFQQIIAAVEYCHRHKIVHRDLKPENLLLDDQLNVKIADFGL-SNIMTDGNFLK 206          
The following BLAST results are available for this feature:
BLAST of CX297861 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 176
Match NameE-valueIdentityDescription
CDKF4_ORYSJ1.129e-1230.19Cyclin-dependent kinase F-4 OS=Oryza sativa subsp.... [more]
SNF1_CANAL1.475e-1229.59Carbon catabolite-derepressing protein kinase OS=C... [more]
MPK19_ARATH1.475e-1230.67Mitogen-activated protein kinase 19 OS=Arabidopsis... [more]
MPK18_ARATH1.475e-1231.82Mitogen-activated protein kinase 18 OS=Arabidopsis... [more]
SLK_RAT1.927e-1228.95STE20-like serine/threonine-protein kinase OS=Ratt... [more]
SLK_MOUSE1.927e-1228.95STE20-like serine/threonine-protein kinase OS=Mus ... [more]
PHO85_ASHGO1.927e-1230.91Negative regulator of the PHO system OS=Ashbya gos... [more]
PHO85_CANGA2.516e-1229.94Negative regulator of the PHO system OS=Candida gl... [more]
KCC1_YEAST2.516e-1227.46Calcium/calmodulin-dependent protein kinase I OS=S... [more]
SNF1_CANTR3.286e-1228.99Carbon catabolite-derepressing protein kinase OS=C... [more]

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Properties
Property NameValue
Genbank descriptionC06006A06SK RindPdig24 Citrus clementina cDNA clone C06006A06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX297861 ID=CX297861; Name=CX297861; organism=Citrus clementina; type=EST; length=684bp
GAGGTGTTTGTAAAGGGATTGGCTCAAAATGGCACTCCCCAATGGCGAAA
TGATGACAAAGATGGACATTACCTGTTTGCGCTTGGAGAGAATTTAACTT
CTCGCTATAAAATCCTCAGAAAAATTGGTGAAGGAACTTTTGGTCAGGTT
TTGGATTGTTTAGATAGGGAAACAGGAGAGACGGTTGCCATAAAAGTTGT
GCGAAGTATTAAGAAATACCGTGAAGCAGCAATGACAGAAATTGATGTGC
TTGAGTTGCTCAAAAGATATGACAGAAGTGGCAGTCGTTGTGTTCAAATA
AGGAACTGGTTTGACTATCGTAACCATATCTGTATCGTGTTTGAGATGCT
TGGACCTAGCCTATACGATTTTCTTCGGAAAAATAATTATCGCCCATTTC
CGGTTGATCTTGTCCGTGAGATTGGCAGACAACTGTTGGAATGTGTAGCA
TTCATGCATGATTTGCGCCTCATCCATACCGACTTGAAGCCTGAGAATAT
ACTTTTTGTTTCTCCGGAATACTTGAAAATACCTGACTACAAGGTTACGG
CCCGATCACCAACTGATGTGAACTATTACAAGAGGTTGCCAAAGTCAAGT
GCTATTAAGGTTATTGATTTTGGAAGCACAGCATATGAGCATCAAGAACA
CAACTATATTGTCTCCACCAGGCACTACCGTGCT
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