CX297861

Overview
NameCX297861
Unique NameCX297861
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length684
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX297861 vs. ExPASy Swiss-Prot
Match: SLK_CAVPO (STE20-like serine/threonine-protein kinase OS=Cavia porcellus GN=SLK PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.321e-12
Identity = 43/152 (28.29%), Postives = 78/152 (51.32%), Query Frame = 1
Query:  106 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYR-EAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARS 558
            ++ + ++G+G FG+V    ++ET    A KV+ +  +   E  M EID+L             V++ + F Y N++ I+ E       D +     RP     ++ + +Q LE + ++HD ++IH DLK  NILF     +K+ D+ V+A++
Sbjct:   34 WETIGELGDGAFGKVYKAQNKETNVLAAAKVIDTKSEEELEDYMVEIDILASCDH-----PNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLEALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKN 180          
BLAST of CX297861 vs. ExPASy Swiss-Prot
Match: PHO85_YEAST (Cyclin-dependent protein kinase PHO85 OS=Saccharomyces cerevisiae GN=PHO85 PE=1 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 7.321e-12
Identity = 49/167 (29.34%), Postives = 86/167 (51.50%), Query Frame = 1
Query:   97 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR--SIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRK----NNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYY 579
            +S++K L K+G GT+  V   L++ TG  VA+K V+  S +     A+ EI +++ LK         V++ +     N + +VFE +   L  ++      N  R   ++LV+    QLL+ +AF H+ +++H DLKP+N+L      LK+ D+ +       VN +
Sbjct:    4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH-----ENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTF 165          
BLAST of CX297861 vs. ExPASy Swiss-Prot
Match: MPK10_ORYSJ (Mitogen-activated protein kinase 10 OS=Oryza sativa subsp. japonica GN=MPK10 PE=2 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 7.321e-12
Identity = 52/154 (33.77%), Postives = 80/154 (51.95%), Query Frame = 1
Query:  100 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAA---MTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGR----QLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDY 540
            SRYKI   IG+G++G V   +D  TGE VAIK +  I ++   A   + EI +L LL+  D    + + +         I +VFE++   L+  ++ N+      DL +E  +    QLL  + ++H   + H DLKP+NIL  S   LKI D+
Sbjct:   23 SRYKIQEVIGKGSYGVVCSAIDVHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKAND------DLTKEHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANSNCKLKICDF 170          
BLAST of CX297861 vs. ExPASy Swiss-Prot
Match: CDC28_ENCCU (Probable cell division control protein 28 homolog OS=Encephalitozoon cuniculi GN=CDC28 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.321e-12
Identity = 47/151 (31.13%), Postives = 75/151 (49.67%), Query Frame = 1
Query:   94 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRK--NNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDY 540
            +T  ++ L KIGEGT+G V    +R T   VA+K +R   +      T I  + LLK    S    V++ +     N + +VFE +   L  +L +  +  R      VR++ +QLL  + + H   + H DLKP+NIL    E +K+ D+
Sbjct:    1 MTESFQKLEKIGEGTYGVVYKARERNTNRVVALKKIRLENENEGIPATTIREILLLKNLKHS--TIVELSDVIYNNNKMYLVFEYVELDLRRYLDRMSDEGRLVEEGFVRKMSQQLLTAMEYCHSRNIFHRDLKPQNILVDPKENIKLADF 149          
BLAST of CX297861 vs. ExPASy Swiss-Prot
Match: MPK7_ORYSJ (Mitogen-activated protein kinase 7 OS=Oryza sativa subsp. japonica GN=MPK7 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.562e-12
Identity = 48/155 (30.97%), Postives = 83/155 (53.55%), Query Frame = 1
Query:   97 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAA---MTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGR----QLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDY 540
            +SRYKI   +G+G++G V   +D+ TG+ VAIK + +I ++   A   + EI +L LL+  D    + + +         I +VFE++   L+  ++ N+      DL +E  +    Q+L  + ++H   + H DLKP+NIL  +   LKI D+
Sbjct:   10 SSRYKIQEIVGKGSYGVVCSAIDQHTGDKVAIKKIHNIFEHLSDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDFKDIYVVFELMDTDLHQVIKAND------DLTKEHHQFFLYQMLRALKYIHTANVYHRDLKPKNILANANCKLKICDF 158          
BLAST of CX297861 vs. ExPASy Swiss-Prot
Match: CDKL1_DANRE (Cyclin-dependent kinase-like 1 OS=Danio rerio GN=cdkl1 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.562e-12
Identity = 49/162 (30.25%), Postives = 81/162 (50.00%), Query Frame = 1
Query:  103 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK---YREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYY 579
            +Y+ + KIGEG++G V  C +++TG+ VAIK     +     ++ A+ EI +L+ LK         V +   F  +  + +VFE    ++ + L +   R  P  +V+ I  Q L+ V F H    IH D+KPENIL    + +K+ D+          +YY
Sbjct:    3 KYEKISKIGEGSYGVVFKCRNKDTGQIVAIKKFVESEDDPIIKKIALREIRMLKQLKH-----PNLVNLMEVFRRKRKLHLVFEYCDHTVLNELDRYP-RGVPEHMVKSIIWQTLQAVNFCHKQNCIHRDVKPENILITKHQVIKLCDFGFARILTGPCDYY 158          
BLAST of CX297861 vs. ExPASy Swiss-Prot
Match: CDC2_MAIZE (Cell division control protein 2 homolog OS=Zea mays GN=CDC2 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.562e-12
Identity = 44/134 (32.84%), Postives = 70/134 (52.24%), Query Frame = 1
Query:  103 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENIL 504
            +Y+ + KIGEGT+G V   LD+ T ET+A+K +R  ++      T I  + LLK  + +    V++ +       I +VFE L   L  F+           L++    Q+L  VA+ H  R++H DLKP+N+L
Sbjct:    3 QYEKVEKIGEGTYGVVYKALDKATNETIALKKIRLEQEDEGVPSTAIREISLLK--EMNHGNIVRLHDVVHSEKRIYLVFEYLDLDLKKFMDSCPEFAKNPTLIKSYLYQILHGVAYCHSHRVLHRDLKPQNLL 134          
BLAST of CX297861 vs. ExPASy Swiss-Prot
Match: MYLKF_DICDI (Probable myosin light chain kinase DDB_G0279831 OS=Dictyostelium discoideum GN=DDB_G0279831 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.249e-11
Identity = 53/171 (30.99%), Postives = 88/171 (51.46%), Query Frame = 1
Query:  103 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDV---LELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML--GPSLYDFLRKN------NYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSP---EYLKIPDYKVTARSPTDVN 573
            +Y+I  ++G GTF  V  C+++E G+  A+K++        A  T++ V   + +LK+        +QI + F+   +  IV E+L  G  LY  L KN      N   +  +  R+I +Q+++ V F+H  +++H DLKPENILF        LKI D+ + +    D N
Sbjct:  565 KYQIFDRLGSGTFSDVYLCINKENGKQYAMKIIDKSLVTMIAQHTDMKVETEVNILKQSFHP--HVIQIIDHFESELYYYIVTELLQGGELLYQ-LEKNHPSTNENVSNYTEEHARKIIKQVIQAVGFLHSNKIVHRDLKPENILFRDKSLGSILKIIDFGLASYVDHDCN 732          
BLAST of CX297861 vs. ExPASy Swiss-Prot
Match: CDC2_SCHPO (Cell division control protein 2 OS=Schizosaccharomyces pombe GN=cdc2 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.249e-11
Identity = 47/150 (31.33%), Postives = 74/150 (49.33%), Query Frame = 1
Query:  106 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSR--CVQIRNWFDYRNHICIVFEMLGPSL---YDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDY 540
            Y+ + KIGEGT+G V     + +G  VA+K +R   +      T I  + LLK  +   +R  CV++ +     + + +VFE L   L    D + +         LV++   QL+  V F H  R+IH DLKP+N+L      LK+ D+
Sbjct:    4 YQKVEKIGEGTYGVVYKARHKLSGRIVAMKKIRLEDESEGVPSTAIREISLLKEVNDENNRSNCVRLLDILHAESKLYLVFEFLDMDLKKYMDRISETGATSLDPRLVQKFTYQLVNGVNFCHSRRIIHRDLKPQNLLIDKEGNLKLADF 153          
BLAST of CX297861 vs. ExPASy Swiss-Prot
Match: MYLK2_RAT (Myosin light chain kinase 2, skeletal/cardiac muscle OS=Rattus norvegicus GN=Mylk2 PE=2 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 1.631e-11
Identity = 49/161 (30.43%), Postives = 87/161 (54.04%), Query Frame = 1
Query:   91 NLTSRYKILRK--IGEGTFGQVLDCLDRETGETVAIKVVRS-IKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSP--EYLKIPDYKVTAR 555
            N++S + +  K  +G G FG V  C +R TG  +A KV++    K +E  + EI+V+  L   +      +Q+ +  +  + I +  E + G  L++ +   +Y+   VD +  + RQ+ + + FMH +R++H DLKPENIL V+     +KI D+ +  R
Sbjct:  292 NVSSEFSMNSKEALGGGKFGAVCTCTERSTGLKLAAKVIKKQTPKDKEMVLLEIEVMNQLNHRN-----LIQLYSAIETSHEIILFMEYIEGGELFERIVDEDYQLTEVDTMVFV-RQICDGILFMHKMRVLHLDLKPENILCVNTTGHLVKIIDFGLARR 446          
The following BLAST results are available for this feature:
BLAST of CX297861 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 176
Match NameE-valueIdentityDescription
SLK_CAVPO7.321e-1228.29STE20-like serine/threonine-protein kinase OS=Cavi... [more]
PHO85_YEAST7.321e-1229.34Cyclin-dependent protein kinase PHO85 OS=Saccharom... [more]
MPK10_ORYSJ7.321e-1233.77Mitogen-activated protein kinase 10 OS=Oryza sativ... [more]
CDC28_ENCCU7.321e-1231.13Probable cell division control protein 28 homolog ... [more]
MPK7_ORYSJ9.562e-1230.97Mitogen-activated protein kinase 7 OS=Oryza sativa... [more]
CDKL1_DANRE9.562e-1230.25Cyclin-dependent kinase-like 1 OS=Danio rerio GN=c... [more]
CDC2_MAIZE9.562e-1232.84Cell division control protein 2 homolog OS=Zea may... [more]
MYLKF_DICDI1.249e-1130.99Probable myosin light chain kinase DDB_G0279831 OS... [more]
CDC2_SCHPO1.249e-1131.33Cell division control protein 2 OS=Schizosaccharom... [more]
MYLK2_RAT1.631e-1130.43Myosin light chain kinase 2, skeletal/cardiac musc... [more]

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Properties
Property NameValue
Genbank descriptionC06006A06SK RindPdig24 Citrus clementina cDNA clone C06006A06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX297861 ID=CX297861; Name=CX297861; organism=Citrus clementina; type=EST; length=684bp
GAGGTGTTTGTAAAGGGATTGGCTCAAAATGGCACTCCCCAATGGCGAAA
TGATGACAAAGATGGACATTACCTGTTTGCGCTTGGAGAGAATTTAACTT
CTCGCTATAAAATCCTCAGAAAAATTGGTGAAGGAACTTTTGGTCAGGTT
TTGGATTGTTTAGATAGGGAAACAGGAGAGACGGTTGCCATAAAAGTTGT
GCGAAGTATTAAGAAATACCGTGAAGCAGCAATGACAGAAATTGATGTGC
TTGAGTTGCTCAAAAGATATGACAGAAGTGGCAGTCGTTGTGTTCAAATA
AGGAACTGGTTTGACTATCGTAACCATATCTGTATCGTGTTTGAGATGCT
TGGACCTAGCCTATACGATTTTCTTCGGAAAAATAATTATCGCCCATTTC
CGGTTGATCTTGTCCGTGAGATTGGCAGACAACTGTTGGAATGTGTAGCA
TTCATGCATGATTTGCGCCTCATCCATACCGACTTGAAGCCTGAGAATAT
ACTTTTTGTTTCTCCGGAATACTTGAAAATACCTGACTACAAGGTTACGG
CCCGATCACCAACTGATGTGAACTATTACAAGAGGTTGCCAAAGTCAAGT
GCTATTAAGGTTATTGATTTTGGAAGCACAGCATATGAGCATCAAGAACA
CAACTATATTGTCTCCACCAGGCACTACCGTGCT
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