CX297861

Overview
NameCX297861
Unique NameCX297861
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length684
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX297861 vs. ExPASy Swiss-Prot
Match: DYRK2_MOUSE (Dual specificity tyrosine-phosphorylation-regulated kinase 2 OS=Mus musculus GN=Dyrk2 PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 5.210e-34
Identity = 76/212 (35.85%), Postives = 121/212 (57.08%), Query Frame = 1
Query:   52 DDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS-RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRA 684
            DD  G Y+    +++  RY++L+ IG+G+FGQV+   D +  + VA+K+VR+ K++   A  EI +LE L++ D+  +   + +   F +RNHIC+ FE+L  +LY+ ++KN ++ F + LVR+    +L+C+  +H  R+IH DLKPENIL                          +    S+IKVIDFGS+ YEHQ     + +R YRA
Sbjct:  202 DDDQGSYVQVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILL-------------------------KQQGRSSIKVIDFGSSCYEHQRVYTYIQSRFYRA 388          
BLAST of CX297861 vs. ExPASy Swiss-Prot
Match: DYRK2_HUMAN (Dual specificity tyrosine-phosphorylation-regulated kinase 2 OS=Homo sapiens GN=DYRK2 PE=1 SV=3)

HSP 1 Score: 144.05 bits (362), Expect = 6.805e-34
Identity = 76/212 (35.85%), Postives = 120/212 (56.60%), Query Frame = 1
Query:   52 DDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS-RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRA 684
            DD  G Y+    +++  RY++L+ IG+G+FGQV+   D +  + VA+K+VR+ K++   A  EI +LE L++ D+  +   + +   F +RNHIC+ FE+L  +LY+ ++KN ++ F + LVR+    +L+C+  +H  R+IH DLKPENIL                          +    S IKVIDFGS+ YEHQ     + +R YRA
Sbjct:  204 DDDQGSYVQVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILL-------------------------KQQGRSGIKVIDFGSSCYEHQRVYTYIQSRFYRA 390          
BLAST of CX297861 vs. ExPASy Swiss-Prot
Match: DYRK3_RAT (Dual specificity tyrosine-phosphorylation-regulated kinase 3 OS=Rattus norvegicus GN=Dyrk3 PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 8.887e-34
Identity = 78/212 (36.79%), Postives = 125/212 (58.96%), Query Frame = 1
Query:   52 DDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS-RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRA 684
            DD DG Y+    ++L  RY++L+ IG+G+FGQV    D +  + VA+K+VR+ K++   A  EI +LE LK+ D++GS   + +   F +RNH+C+ FE+L   LY+ ++KN ++ F V LVR+  + +L+ +  +H  ++IH DLKPENIL                     + ++ R    SA KVIDFGS+ +E+Q+    + +R YRA
Sbjct:  190 DDADGAYIHVPRDHLAYRYEVLKIIGKGSFGQVARVYDHKLRQYVALKMVRNEKRFHRQAAEEIRILEHLKKQDKTGSMNVIHMLESFTFRNHVCMAFELLSIDLYELIKKNKFQGFSVQLVRKFAQSILQSLDALHKNKIIHCDLKPENIL---------------------LKHHGR----SATKVIDFGSSCFEYQKLYTYIQSRFYRA 376          
BLAST of CX297861 vs. ExPASy Swiss-Prot
Match: DYRK3_MOUSE (Dual specificity tyrosine-phosphorylation-regulated kinase 3 OS=Mus musculus GN=Dyrk3 PE=1 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 8.887e-34
Identity = 78/212 (36.79%), Postives = 125/212 (58.96%), Query Frame = 1
Query:   52 DDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS-RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRA 684
            DD DG Y+    ++L  RY++L+ IG+G+FGQV    D +  + VA+K+VR+ K++   A  EI +LE LK+ D++GS   + +   F +RNH+C+ FE+L   LY+ ++KN ++ F V LVR+  + +L+ +  +H  ++IH DLKPENIL                     + ++ R    SA KVIDFGS+ +E+Q+    + +R YRA
Sbjct:  190 DDADGAYIHVPRDHLAYRYEVLKIIGKGSFGQVARVYDHKLRQYVALKMVRNEKRFHRQAAEEIRILEHLKKQDKTGSMNVIHMLESFTFRNHVCMAFELLSIDLYELIKKNKFQGFSVQLVRKFAQSILQSLDALHKNKIIHCDLKPENIL---------------------LKHHGR----SATKVIDFGSSCFEYQKLYTYIQSRFYRA 376          
BLAST of CX297861 vs. ExPASy Swiss-Prot
Match: DYRK3_MACFA (Dual specificity tyrosine-phosphorylation-regulated kinase 3 OS=Macaca fascicularis GN=DYRK3 PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.516e-33
Identity = 79/212 (37.26%), Postives = 123/212 (58.02%), Query Frame = 1
Query:   52 DDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS-RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRA 684
            DD DG Y+    ++L  RY++L+ IG+G+FGQV    D +  + VA+K+VR+ K++   A  EI +LE LK+ D++GS   + +   F +RNH+C+ FE+L   LY+ ++KN ++ F V LVR+  + +L+ +  +H  ++IH DLKPENIL            K   RS T              KVIDFGS+ +E+Q+    + +R YRA
Sbjct:  171 DDADGAYIHVPRDHLAYRYEVLKIIGKGSFGQVARVYDHKLRQYVALKMVRNEKRFHRQAAEEIRILEHLKKQDKTGSMNVIHMLESFTFRNHVCMAFELLSIDLYELIKKNKFQGFSVQLVRKFAQSILQSLDALHKNKIIHCDLKPENILL-----------KHHGRSST--------------KVIDFGSSCFEYQKLYTYIQSRFYRA 357          
BLAST of CX297861 vs. ExPASy Swiss-Prot
Match: DYRK3_HUMAN (Dual specificity tyrosine-phosphorylation-regulated kinase 3 OS=Homo sapiens GN=DYRK3 PE=1 SV=3)

HSP 1 Score: 142.895 bits (359), Expect = 1.516e-33
Identity = 79/212 (37.26%), Postives = 123/212 (58.02%), Query Frame = 1
Query:   52 DDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS-RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRA 684
            DD DG Y+    ++L  RY++L+ IG+G+FGQV    D +  + VA+K+VR+ K++   A  EI +LE LK+ D++GS   + +   F +RNH+C+ FE+L   LY+ ++KN ++ F V LVR+  + +L+ +  +H  ++IH DLKPENIL            K   RS T              KVIDFGS+ +E+Q+    + +R YRA
Sbjct:  191 DDADGAYIHVPRDHLAYRYEVLKIIGKGSFGQVARVYDHKLRQYVALKMVRNEKRFHRQAAEEIRILEHLKKQDKTGSMNVIHMLESFTFRNHVCMAFELLSIDLYELIKKNKFQGFSVQLVRKFAQSILQSLDALHKNKIIHCDLKPENILL-----------KHHGRSST--------------KVIDFGSSCFEYQKLYTYIQSRFYRA 377          
BLAST of CX297861 vs. ExPASy Swiss-Prot
Match: DYRK2_CHICK (Dual specificity tyrosine-phosphorylation-regulated kinase 2 OS=Gallus gallus GN=DYRK2 PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 1.980e-33
Identity = 75/212 (35.38%), Postives = 120/212 (56.60%), Query Frame = 1
Query:   52 DDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS-RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRA 684
            DD  G Y+    +++  RY++L+ IG+G+FGQV+   D +  + VA+K+VR+ K++   A  EI +LE L++ D+  +   + +   F +R+HIC+ FE+L  +LY+ ++KN ++ F + LVR+    +L+C+  +H  R+IH DLKPENIL                          +    S IKVIDFGS+ YEHQ     + +R YRA
Sbjct:  129 DDDQGSYIQVPHDHIAYRYEVLKVIGKGSFGQVVKAYDHKMHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNNMNVIHMLENFTFRSHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILL-------------------------KQQGRSGIKVIDFGSSCYEHQRVYTYIQSRFYRA 315          
BLAST of CX297861 vs. ExPASy Swiss-Prot
Match: DYRK3_DROME (Putative dual specificity tyrosine-phosphorylation-regulated kinase 3 homolog OS=Drosophila melanogaster GN=Dyrk3 PE=1 SV=3)

HSP 1 Score: 139.043 bits (349), Expect = 2.189e-32
Identity = 72/212 (33.96%), Postives = 122/212 (57.55%), Query Frame = 1
Query:   52 DDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS-RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRA 684
            D++ G Y+    +++  RY++L+ IG+G+FGQV+   D +T E VA+K+VR+ K++   A  EI +L  L+R+D+  +   + + ++F +RNH CI FE+L  +LY+ ++KN ++ F + LVR+    LL+C+  ++   +IH D+KPEN+L                          +    S IKVIDFGS+ +E+Q     + +R YRA
Sbjct:  258 DNEQGAYIHVPHDHVAYRYEMLKIIGKGSFGQVIKAYDHKTHEHVALKIVRNEKRFHRQAQEEIRILHHLRRHDKYNTMNIIHMFDYFTFRNHTCITFELLSINLYELIKKNGFKGFSLQLVRKFAHSLLQCLDALYKNDIIHCDMKPENVLL-------------------------KQQGRSGIKVIDFGSSCFENQRIYTYIQSRFYRA 444          
BLAST of CX297861 vs. ExPASy Swiss-Prot
Match: DYRK2_DICDI (Probable serine/threonine-protein kinase dyrk2 OS=Dictyostelium discoideum GN=dyrk2 PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.189e-32
Identity = 75/212 (35.38%), Postives = 123/212 (58.02%), Query Frame = 1
Query:   52 DDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYD-RSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRA 684
            D+  G Y     +++  R++I+  +G+G+F QV+   D +TGE VA+K++R+ K++   A+TEI +LE LK  D  S +  V + N+F +RNH+ + FE+L  +LYDFL+ N+++ + ++LVR  G Q+L  + F+    +IH DLKPENIL  S                         P  S IK+IDFGS+ +E+++    + +R YR+
Sbjct:  587 DNDIGEYKVVERDHIAYRFEIVSILGQGSFCQVVKGYDYKTGEMVALKILRNQKRFHNQALTEIKILEYLKTNDPNSTASIVHLNNYFYFRNHLILTFELLSMNLYDFLKVNHFQGYNLNLVRRFGAQILTSLRFLSKRNIIHADLKPENILLKS-------------------------PTKSGIKLIDFGSSCFENEQIFTYIQSRFYRS 773          
BLAST of CX297861 vs. ExPASy Swiss-Prot
Match: DYRK2_DROME (Dual specificity tyrosine-phosphorylation-regulated kinase 2 OS=Drosophila melanogaster GN=smi35A PE=1 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.086e-31
Identity = 71/212 (33.49%), Postives = 121/212 (57.08%), Query Frame = 1
Query:   52 DDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSR-CVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRA 684
            DD +G+Y     +++  RY+IL  IG+G+FGQV+  LD +T   VAIK++R+ K++   A+ E+++L+ L+  D  GS   + + ++  +R H+CI FE++  +LY+ ++KNNY  F + L+R     +++C+  ++   +IH DLKPENIL                          +   SS+IKVIDFGS+ Y  ++    + +R YR+
Sbjct:  180 DDDNGNYKIIEHDHIAFRYEILEVIGKGSFGQVIRALDHKTNTHVAIKIIRNKKRFLNQAVVELNILDELREKDADGSHNVIHMLDYTYFRKHLCITFELMSLNLYELIKKNNYNGFSMSLIRRFCNSIVKCLRLLYKENIIHCDLKPENILL-------------------------KQRGSSSIKVIDFGSSCYVDRKIYTYIQSRFYRS 366          
The following BLAST results are available for this feature:
BLAST of CX297861 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 176
Match NameE-valueIdentityDescription
DYRK2_MOUSE5.210e-3435.85Dual specificity tyrosine-phosphorylation-regulate... [more]
DYRK2_HUMAN6.805e-3435.85Dual specificity tyrosine-phosphorylation-regulate... [more]
DYRK3_RAT8.887e-3436.79Dual specificity tyrosine-phosphorylation-regulate... [more]
DYRK3_MOUSE8.887e-3436.79Dual specificity tyrosine-phosphorylation-regulate... [more]
DYRK3_MACFA1.516e-3337.26Dual specificity tyrosine-phosphorylation-regulate... [more]
DYRK3_HUMAN1.516e-3337.26Dual specificity tyrosine-phosphorylation-regulate... [more]
DYRK2_CHICK1.980e-3335.38Dual specificity tyrosine-phosphorylation-regulate... [more]
DYRK3_DROME2.189e-3233.96Putative dual specificity tyrosine-phosphorylation... [more]
DYRK2_DICDI2.189e-3235.38Probable serine/threonine-protein kinase dyrk2 OS=... [more]
DYRK2_DROME1.086e-3133.49Dual specificity tyrosine-phosphorylation-regulate... [more]

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Properties
Property NameValue
Genbank descriptionC06006A06SK RindPdig24 Citrus clementina cDNA clone C06006A06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX297861 ID=CX297861; Name=CX297861; organism=Citrus clementina; type=EST; length=684bp
GAGGTGTTTGTAAAGGGATTGGCTCAAAATGGCACTCCCCAATGGCGAAA
TGATGACAAAGATGGACATTACCTGTTTGCGCTTGGAGAGAATTTAACTT
CTCGCTATAAAATCCTCAGAAAAATTGGTGAAGGAACTTTTGGTCAGGTT
TTGGATTGTTTAGATAGGGAAACAGGAGAGACGGTTGCCATAAAAGTTGT
GCGAAGTATTAAGAAATACCGTGAAGCAGCAATGACAGAAATTGATGTGC
TTGAGTTGCTCAAAAGATATGACAGAAGTGGCAGTCGTTGTGTTCAAATA
AGGAACTGGTTTGACTATCGTAACCATATCTGTATCGTGTTTGAGATGCT
TGGACCTAGCCTATACGATTTTCTTCGGAAAAATAATTATCGCCCATTTC
CGGTTGATCTTGTCCGTGAGATTGGCAGACAACTGTTGGAATGTGTAGCA
TTCATGCATGATTTGCGCCTCATCCATACCGACTTGAAGCCTGAGAATAT
ACTTTTTGTTTCTCCGGAATACTTGAAAATACCTGACTACAAGGTTACGG
CCCGATCACCAACTGATGTGAACTATTACAAGAGGTTGCCAAAGTCAAGT
GCTATTAAGGTTATTGATTTTGGAAGCACAGCATATGAGCATCAAGAACA
CAACTATATTGTCTCCACCAGGCACTACCGTGCT
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