CX297861

Overview
NameCX297861
Unique NameCX297861
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length684
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX297861 vs. ExPASy Swiss-Prot
Match: DYR1A_HUMAN (Dual specificity tyrosine-phosphorylation-regulated kinase 1A OS=Homo sapiens GN=DYRK1A PE=1 SV=2)

HSP 1 Score: 130.183 bits (326), Expect = 1.017e-29
Identity = 76/214 (35.51%), Postives = 115/214 (53.74%), Query Frame = 1
Query:   52 DDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSR-CVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH--DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRA 684
            DD +  Y+   GE    RY+I   IG+G+FGQV+   DR   E VAIK++++ K +   A  E+ +LEL+ ++D       V ++  F +RNH+C+VFEML  +LYD LR  N+R   ++L R+  +Q+   + F+   +L +IH DLKPENIL  +P                         K SAIK++DFGS+    Q     + +R YR+
Sbjct:  141 DDDNYDYIVKNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNP-------------------------KRSAIKIVDFGSSCQLGQRIYQYIQSRFYRS 329          
BLAST of CX297861 vs. ExPASy Swiss-Prot
Match: DYRK1_DICDI (Probable serine/threonine-protein kinase dyrk1 OS=Dictyostelium discoideum GN=dyrk1 PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.265e-29
Identity = 70/214 (32.71%), Postives = 119/214 (55.61%), Query Frame = 1
Query:   52 DDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS-RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH--DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRA 684
            DD++  Y+  +GE    R++I+  +G+G+FGQV+   D    E VAIK++++   +   A+ EI +LEL+   D     + +++++ F +RNH+CIV E+L  +LYD LR  ++    ++L+++   Q+L  + FM   ++ +IH DLKPENIL                          R PK SAIK+IDFGS+ + ++     + +R YR+
Sbjct:  286 DDENADYIVRIGEVFVDRFEIISSLGKGSFGQVVKAFDSVLKEYVAIKIIKNKVPFYNQALIEIRLLELMNNKDPEDQYKIIKLKHHFKFRNHLCIVTELLSYNLYDLLRNTHFHGVSLNLIKKFAHQILTALFFMSTPEVDVIHCDLKPENILL-------------------------RNPKRSAIKIIDFGSSCHSNERMYKYIQSRFYRS 474          
BLAST of CX297861 vs. ExPASy Swiss-Prot
Match: PPK15_SCHPO (Serine/threonine-protein kinase ppk15 OS=Schizosaccharomyces pombe GN=ppk15 PE=1 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.505e-28
Identity = 72/203 (35.47%), Postives = 111/203 (54.68%), Query Frame = 1
Query:   82 LGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLK-RYDRSGSR-CVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRA 684
            LG +   +Y IL  +G GTFGQV  C D +T + VAIKV+++   +    + E+ +LELL  +YD    R  +++ + F ++NH+C+VFE+L  +LY+ +++N +R   + LVR    QLL C + +   R+IH DLKPENIL                    D++       S  +KVIDFGS  +E Q     + +R YR+
Sbjct:  122 LGTDEGRKYLILDTLGHGTFGQVARCQDLKTQQIVAIKVIKNKPAFYNQCVMEVSILELLNNKYDPEDKRHLIRLYDQFMHKNHLCLVFELLSINLYELIKQNQFRGLHLSLVRSFATQLLSCTSLLKQARIIHCDLKPENILL------------------QDLS-------SPIVKVIDFGSACHERQTVYTYIQSRFYRS 299          
BLAST of CX297861 vs. ExPASy Swiss-Prot
Match: HIPK2_MOUSE (Homeodomain-interacting protein kinase 2 OS=Mus musculus GN=Hipk2 PE=1 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 2.769e-27
Identity = 69/199 (34.67%), Postives = 108/199 (54.27%), Query Frame = 1
Query:   91 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE-HNYIVSTRHYRA 684
            ++T+ Y++L  +G GTFGQV+ C  R T E VAIK++++   Y      E+ +L  L          V+    F ++NH C+VFEML  +LYDFL++N + P P+  +R + +Q+   +  +  L LIH DLKPENI+ V P           +R P     Y+       +KVIDFGS ++  +   +  + +R+YRA
Sbjct:  194 SMTNTYEVLEFLGRGTFGQVVKCWKRGTNEIVAIKILKNHPSYARQGQIEVSILARLSTESADDYNFVRAYECFQHKNHTCLVFEMLEQNLYDFLKQNKFSPLPLKYIRPVLQQVATALMKLKSLGLIHADLKPENIMLVDP-----------SRQP-----YR-------VKVIDFGSASHVSKAVCSTYLQSRYYRA 369          
BLAST of CX297861 vs. ExPASy Swiss-Prot
Match: HIPK2_MESAU (Homeodomain-interacting protein kinase 2 OS=Mesocricetus auratus GN=Hipk2 PE=1 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 2.769e-27
Identity = 69/199 (34.67%), Postives = 108/199 (54.27%), Query Frame = 1
Query:   91 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE-HNYIVSTRHYRA 684
            ++T+ Y++L  +G GTFGQV+ C  R T E VAIK++++   Y      E+ +L  L          V+    F ++NH C+VFEML  +LYDFL++N + P P+  +R + +Q+   +  +  L LIH DLKPENI+ V P           +R P     Y+       +KVIDFGS ++  +   +  + +R+YRA
Sbjct:  194 SMTNTYEVLEFLGRGTFGQVVKCWKRGTNEIVAIKILKNHPSYARQGQIEVSILARLSTESADDYNFVRAYECFQHKNHTCLVFEMLEQNLYDFLKQNKFSPLPLKYIRPVLQQVATALMKLKSLGLIHADLKPENIMLVDP-----------SRQP-----YR-------VKVIDFGSASHVSKAVCSTYLQSRYYRA 369          
BLAST of CX297861 vs. ExPASy Swiss-Prot
Match: HIPK2_HUMAN (Homeodomain-interacting protein kinase 2 OS=Homo sapiens GN=HIPK2 PE=1 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 2.769e-27
Identity = 69/199 (34.67%), Postives = 108/199 (54.27%), Query Frame = 1
Query:   91 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE-HNYIVSTRHYRA 684
            ++T+ Y++L  +G GTFGQV+ C  R T E VAIK++++   Y      E+ +L  L          V+    F ++NH C+VFEML  +LYDFL++N + P P+  +R + +Q+   +  +  L LIH DLKPENI+ V P           +R P     Y+       +KVIDFGS ++  +   +  + +R+YRA
Sbjct:  194 SMTNTYEVLEFLGRGTFGQVVKCWKRGTNEIVAIKILKNHPSYARQGQIEVSILARLSTESADDYNFVRAYECFQHKNHTCLVFEMLEQNLYDFLKQNKFSPLPLKYIRPVLQQVATALMKLKSLGLIHADLKPENIMLVDP-----------SRQP-----YR-------VKVIDFGSASHVSKAVCSTYLQSRYYRA 369          
BLAST of CX297861 vs. ExPASy Swiss-Prot
Match: HIPK1_RAT (Homeodomain-interacting protein kinase 1 OS=Rattus norvegicus GN=Hipk1 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 4.723e-27
Identity = 70/199 (35.18%), Postives = 107/199 (53.77%), Query Frame = 1
Query:   91 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE-HNYIVSTRHYRA 684
            ++T+ Y++L  +G GTFGQV  C  R T E VAIK++++   Y      E+ +L  L   +      V+    F ++NH C+VFEML  +LYDFL++N + P P+  +R I +Q+   +  +  L LIH DLKPENI+ V P            R P     Y+       +KVIDFGS ++  +   +  + +R+YRA
Sbjct:  185 SMTNSYEVLEFLGRGTFGQVAKCWKRSTKEIVAIKILKNHPSYARQGQIEVSILSRLSSENADEYNFVRSYECFQHKNHTCLVFEMLEQNLYDFLKQNKFSPLPLKYIRPILQQVATALMKLKSLGLIHADLKPENIMLVDP-----------VRQP-----YR-------VKVIDFGSASHVSKAVCSTYLQSRYYRA 360          
BLAST of CX297861 vs. ExPASy Swiss-Prot
Match: HIPK1_MOUSE (Homeodomain-interacting protein kinase 1 OS=Mus musculus GN=Hipk1 PE=1 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 4.723e-27
Identity = 70/199 (35.18%), Postives = 107/199 (53.77%), Query Frame = 1
Query:   91 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE-HNYIVSTRHYRA 684
            ++T+ Y++L  +G GTFGQV  C  R T E VAIK++++   Y      E+ +L  L   +      V+    F ++NH C+VFEML  +LYDFL++N + P P+  +R I +Q+   +  +  L LIH DLKPENI+ V P            R P     Y+       +KVIDFGS ++  +   +  + +R+YRA
Sbjct:  185 SMTNSYEVLEFLGRGTFGQVAKCWKRSTKEIVAIKILKNHPSYARQGQIEVSILSRLSSENADEYNFVRSYECFQHKNHTCLVFEMLEQNLYDFLKQNKFSPLPLKYIRPILQQVATALMKLKSLGLIHADLKPENIMLVDP-----------VRQP-----YR-------VKVIDFGSASHVSKAVCSTYLQSRYYRA 360          
BLAST of CX297861 vs. ExPASy Swiss-Prot
Match: HIPK1_HUMAN (Homeodomain-interacting protein kinase 1 OS=Homo sapiens GN=HIPK1 PE=1 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 4.723e-27
Identity = 70/199 (35.18%), Postives = 107/199 (53.77%), Query Frame = 1
Query:   91 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE-HNYIVSTRHYRA 684
            ++T+ Y++L  +G GTFGQV  C  R T E VAIK++++   Y      E+ +L  L   +      V+    F ++NH C+VFEML  +LYDFL++N + P P+  +R I +Q+   +  +  L LIH DLKPENI+ V P            R P     Y+       +KVIDFGS ++  +   +  + +R+YRA
Sbjct:  185 SMTNSYEVLEFLGRGTFGQVAKCWKRSTKEIVAIKILKNHPSYARQGQIEVSILSRLSSENADEYNFVRSYECFQHKNHTCLVFEMLEQNLYDFLKQNKFSPLPLKYIRPILQQVATALMKLKSLGLIHADLKPENIMLVDP-----------VRQP-----YR-------VKVIDFGSASHVSKAVCSTYLQSRYYRA 360          
BLAST of CX297861 vs. ExPASy Swiss-Prot
Match: HIPK3_HUMAN (Homeodomain-interacting protein kinase 3 OS=Homo sapiens GN=HIPK3 PE=1 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 6.169e-27
Identity = 70/199 (35.18%), Postives = 108/199 (54.27%), Query Frame = 1
Query:   91 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE-HNYIVSTRHYRA 684
            ++ + Y++L  +G GTFGQV+ C  R T E VAIK++++   Y      E+ +L  L   +      V+    F +RNH C+VFEML  +LYDFL++N + P P+ ++R I +Q+   +  +  L LIH DLKPENI+ V P            R P     Y+       +KVIDFGS ++  +   +  + +R+YRA
Sbjct:  192 SMKNTYEVLDFLGRGTFGQVVKCWKRGTNEIVAIKILKNHPSYARQGQIEVSILARLSTENADEYNFVRAYECFQHRNHTCLVFEMLEQNLYDFLKQNKFSPLPLKVIRPILQQVATALKKLKSLGLIHADLKPENIMLVDP-----------VRQP-----YR-------VKVIDFGSASHVSKTVCSTYLQSRYYRA 367          
The following BLAST results are available for this feature:
BLAST of CX297861 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 176
Match NameE-valueIdentityDescription
DYR1A_HUMAN1.017e-2935.51Dual specificity tyrosine-phosphorylation-regulate... [more]
DYRK1_DICDI2.265e-2932.71Probable serine/threonine-protein kinase dyrk1 OS=... [more]
PPK15_SCHPO2.505e-2835.47Serine/threonine-protein kinase ppk15 OS=Schizosac... [more]
HIPK2_MOUSE2.769e-2734.67Homeodomain-interacting protein kinase 2 OS=Mus mu... [more]
HIPK2_MESAU2.769e-2734.67Homeodomain-interacting protein kinase 2 OS=Mesocr... [more]
HIPK2_HUMAN2.769e-2734.67Homeodomain-interacting protein kinase 2 OS=Homo s... [more]
HIPK1_RAT4.723e-2735.18Homeodomain-interacting protein kinase 1 OS=Rattus... [more]
HIPK1_MOUSE4.723e-2735.18Homeodomain-interacting protein kinase 1 OS=Mus mu... [more]
HIPK1_HUMAN4.723e-2735.18Homeodomain-interacting protein kinase 1 OS=Homo s... [more]
HIPK3_HUMAN6.169e-2735.18Homeodomain-interacting protein kinase 3 OS=Homo s... [more]

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Properties
Property NameValue
Genbank descriptionC06006A06SK RindPdig24 Citrus clementina cDNA clone C06006A06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX297861 ID=CX297861; Name=CX297861; organism=Citrus clementina; type=EST; length=684bp
GAGGTGTTTGTAAAGGGATTGGCTCAAAATGGCACTCCCCAATGGCGAAA
TGATGACAAAGATGGACATTACCTGTTTGCGCTTGGAGAGAATTTAACTT
CTCGCTATAAAATCCTCAGAAAAATTGGTGAAGGAACTTTTGGTCAGGTT
TTGGATTGTTTAGATAGGGAAACAGGAGAGACGGTTGCCATAAAAGTTGT
GCGAAGTATTAAGAAATACCGTGAAGCAGCAATGACAGAAATTGATGTGC
TTGAGTTGCTCAAAAGATATGACAGAAGTGGCAGTCGTTGTGTTCAAATA
AGGAACTGGTTTGACTATCGTAACCATATCTGTATCGTGTTTGAGATGCT
TGGACCTAGCCTATACGATTTTCTTCGGAAAAATAATTATCGCCCATTTC
CGGTTGATCTTGTCCGTGAGATTGGCAGACAACTGTTGGAATGTGTAGCA
TTCATGCATGATTTGCGCCTCATCCATACCGACTTGAAGCCTGAGAATAT
ACTTTTTGTTTCTCCGGAATACTTGAAAATACCTGACTACAAGGTTACGG
CCCGATCACCAACTGATGTGAACTATTACAAGAGGTTGCCAAAGTCAAGT
GCTATTAAGGTTATTGATTTTGGAAGCACAGCATATGAGCATCAAGAACA
CAACTATATTGTCTCCACCAGGCACTACCGTGCT
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