CX297861

Overview
NameCX297861
Unique NameCX297861
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length684
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX297861 vs. ExPASy Swiss-Prot
Match: HIPK3_RAT (Homeodomain-interacting protein kinase 3 OS=Rattus norvegicus GN=Hipk3 PE=1 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 8.057e-27
Identity = 74/212 (34.91%), Postives = 111/212 (52.36%), Query Frame = 1
Query:   61 DGHYLFALGENLTS---RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE-HNYIVSTRHYRA 684
            +G Y     E L S    Y++L  +G GTFGQV+ C  R T E VAIK++++   Y      E+ +L  L   +      V+    F +RNH C+VFEML  +LYDFL++N + P P+ ++R + +Q+   +  +  L LIH DLKPENI+ V P            R P     Y+       +KVIDFGS ++  +   +  + +R+YRA
Sbjct:  179 EGDYQLVQHEVLCSVKNTYEVLDFLGRGTFGQVVKCWKRGTNEIVAIKILKNHPSYARQGQIEVSILARLSTENADEYNFVRAYECFQHRNHTCLVFEMLEQNLYDFLKQNKFSPLPLKVIRPVLQQVATALKKLKSLGLIHADLKPENIMLVDP-----------VRQP-----YR-------VKVIDFGSASHVSKTVCSTYLQSRYYRA 367          
BLAST of CX297861 vs. ExPASy Swiss-Prot
Match: HIPK3_MOUSE (Homeodomain-interacting protein kinase 3 OS=Mus musculus GN=Hipk3 PE=1 SV=2)

HSP 1 Score: 120.553 bits (301), Expect = 8.057e-27
Identity = 69/199 (34.67%), Postives = 108/199 (54.27%), Query Frame = 1
Query:   91 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE-HNYIVSTRHYRA 684
            ++ + Y++L  +G GTFGQV+ C  R T E VAIK++++   Y      E+ +L  L   +      V+    F +RNH C+VFEML  +LYDFL++N + P P+ ++R + +Q+   +  +  L LIH DLKPENI+ V P            R P     Y+       +KVIDFGS ++  +   +  + +R+YRA
Sbjct:  192 SMKNTYEVLDFLGRGTFGQVVKCWKRGTNEIVAIKILKNHPSYARQGQIEVSILARLSTENADEYNFVRAYECFQHRNHTCLVFEMLEQNLYDFLKQNKFSPLPLKVIRPVLQQVATALKKLKSLGLIHADLKPENIMLVDP-----------VRQP-----YR-------VKVIDFGSASHVSKTVCSTYLQSRYYRA 367          
BLAST of CX297861 vs. ExPASy Swiss-Prot
Match: MBK1_CAEBR (Dual specificity tyrosine-phosphorylation-regulated kinase mbk-1 OS=Caenorhabditis briggsae GN=mbk-1 PE=3 SV=2)

HSP 1 Score: 119.398 bits (298), Expect = 1.795e-26
Identity = 77/217 (35.48%), Postives = 117/217 (53.92%), Query Frame = 1
Query:   52 DDKDGHYLFALGENLTSRYKILRK--IGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS-RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH--DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE-HQEHNYIVSTRHYRA 684
            DD++  Y+   GE    RY IL    +G+G+FGQV    D  T E VAIK++++ K + + A  EI +LEL   +D+      V ++  F +R H+C+VFE+L  +LYD L+  N+R   ++L R+  +QL + + F+   +L +IH DLKPEN+L V+                          K S I+VIDFGS+    H+ + YI S R YR+
Sbjct:  347 DDQNYDYILKNGEIFDKRYVILSDTPVGKGSFGQVTKAYDTVTKEEVAIKIIKNKKTFFDQAQIEIHLLELTNAHDKDNKYNIVTLKGHFVHRAHLCLVFELLSYNLYDLLKNTNFRGVSLNLARKFAQQLGKTLLFLSSPELSIIHCDLKPENVLLVN-------------------------AKRSQIRVIDFGSSCQTGHRIYQYIQS-RFYRS 537          
BLAST of CX297861 vs. ExPASy Swiss-Prot
Match: YAK1_ENCCU (Probable dual specificity protein kinase YAK1 homolog OS=Encephalitozoon cuniculi GN=YAK1 PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 8.908e-26
Identity = 73/201 (36.32%), Postives = 106/201 (52.74%), Query Frame = 1
Query:   82 LGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRA 684
            L +N + +Y I+  +G GTFGQV+ C+  + GE VAIKVV++  KY    M E+ +L  L  Y+    R V I++ F Y+ H+CIV E+LG +LY FL+   ++      +R I  Q+LE +  +  L +IH DLKPENIL    +  KI                         K+IDFGS     Q  ++ V +R+YRA
Sbjct:   32 LAKNKSQKYMIIDMLGTGTFGQVVRCVGSD-GEEVAIKVVKNQPKYYNYEMNEVRILHKLL-YNNLNDRFVTIKDVFMYKQHLCIVEELLGRNLYTFLKMTRFKGLDHPTLRTILHQILEGMVQLSLLGIIHCDLKPENILIADYDTFKI-------------------------KIIDFGSAVTSPQGSHFYVQSRYYRA 205          
BLAST of CX297861 vs. ExPASy Swiss-Prot
Match: YAK1_YEAST (Dual specificity protein kinase YAK1 OS=Saccharomyces cerevisiae GN=YAK1 PE=1 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.519e-25
Identity = 66/203 (32.51%), Postives = 112/203 (55.17%), Query Frame = 1
Query:   82 LGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELL-KRYDRSGSR-CVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRA 684
            LG     +Y +L  +G+GTFGQV+ C +  T E +A+KVV+S  +Y   ++TE  +LELL ++ D +     +++ + F ++NH+C+VFE+L  +LY+ L++N +    + L+R    Q+L+ +  + + +LIH DLKPENIL  +P+                            +K+IDFGS+  E +     + +R YRA
Sbjct:  361 LGVEQNRKYLVLDILGQGTFGQVVKCQNLLTKEILAVKVVKSRTEYLTQSITEAKILELLNQKIDPTNKHHFLRMYDSFVHKNHLCLVFELLSNNLYELLKQNKFHGLSIQLIRTFTTQILDSLCVLKESKLIHCDLKPENILLCAPD-------------------------KPELKIIDFGSSCEEARTVYTYIQSRFYRA 538          
BLAST of CX297861 vs. ExPASy Swiss-Prot
Match: YAKA_DICDI (Probable serine/threonine-protein kinase yakA OS=Dictyostelium discoideum GN=yakA PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.592e-25
Identity = 68/218 (31.19%), Postives = 121/218 (55.50%), Query Frame = 1
Query:   52 DDKDGHYLFALGENLTS-----RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLK-RYD-RSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRA 684
            D+ +  Y+  + + +T+     +YK+L  +G+GTFGQV+ C + +T E VAIK++++ + Y +    EI  L+ L  ++D    +  +++ + F ++ H+CIVFE+L  +L++ +++NN+R    +L++    Q+L+ +  + +  +IH DLKPENIL                    +VN       S AIK+IDFGS  YE       + +RHYR+
Sbjct:  182 DNVNSDYIVYVNDIITNNESGQKYKVLDSLGQGTFGQVVKCKNCDTDELVAIKILKNKQAYFQQGRLEIQTLKSLNDQHDPEDKNHILRLLDSFIHKMHLCIVFELLSVNLFELIKQNNFRGLSTNLIKVFLIQILDALIVLANANIIHCDLKPENILL------------------QNVN-------SPAIKIIDFGSACYEKSTLYTYIQSRHYRS 374          
BLAST of CX297861 vs. ExPASy Swiss-Prot
Match: MBK1_CAEEL (Dual specificity tyrosine-phosphorylation-regulated kinase mbk-1 OS=Caenorhabditis elegans GN=mbk-1 PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.385e-25
Identity = 75/217 (34.56%), Postives = 116/217 (53.46%), Query Frame = 1
Query:   52 DDKDGHYLFALGENLTSRYKILRK--IGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS-RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH--DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE-HQEHNYIVSTRHYRA 684
            DD++  Y+   GE    RY IL    +G+G+FGQV    D    E VAIK++++ K + + A  EI +LEL   +D+      V ++  F +R H+C+VFE+L  +LYD L+  ++R   ++L R+  +QL + + F+   +L +IH DLKPEN+L V+                          K S I+VIDFGS+    H+ + YI S R YR+
Sbjct:  308 DDQNYDYILKNGEIFDKRYVILSDTPVGKGSFGQVTKAYDTLNKEEVAIKIIKNKKTFFDQAQIEIHLLELTNAHDKDNKYNIVTLKGHFVHRAHLCLVFELLSYNLYDLLKNTSFRGVSLNLARKFAQQLGKTLLFLSSPELSIIHCDLKPENVLLVN-------------------------AKRSQIRVIDFGSSCQTGHRIYQYIQS-RFYRS 498          
BLAST of CX297861 vs. ExPASy Swiss-Prot
Match: PRP4B_DICDI (Serine/threonine-protein kinase prpf4B OS=Dictyostelium discoideum GN=prpf4B PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.138e-23
Identity = 68/217 (31.34%), Postives = 112/217 (51.61%), Query Frame = 1
Query:   52 DDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG---SRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRK-NNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEH--NYIVSTRHYRA 684
            DD DG+Y F +GE +  +Y+I   IG G F  V+   + +T E V IK++R+      + + EI++L+ +     S    S C+Q+++ F+YRNH+CIVFE +  SL+  ++K        ++ VR   +QL   +  + + +++H D+KP+NI+                     VN  K     + IK++DFGS    H+     Y+VS R YRA
Sbjct:  473 DDADGYYKFRVGE-IMDKYQIFSPIGSGVFSTVVSAKETKTNEDVVIKIIRNRPSMHRSGLKEIEILQKISNTPTSSNQKSHCIQMKDHFNYRNHLCIVFEPMSMSLHQLIKKYGKDIGLSLNAVRVYAKQLFLALKHIKNSKILHADIKPDNIV---------------------VNEAK-----NTIKIVDFGSAGEIHESEITPYLVS-RFYRA 661          
BLAST of CX297861 vs. ExPASy Swiss-Prot
Match: SRPK1_MOUSE (Serine/threonine-protein kinase SRPK1 OS=Mus musculus GN=Srpk1 PE=1 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 1.331e-21
Identity = 61/166 (36.75%), Postives = 102/166 (61.45%), Query Frame = 1
Query:   58 KDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKR---YDRSGSRCVQIRNWFDYR----NHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH-DLRLIHTDLKPENILF-VSPEYLK 528
            K G++L  +G+    RY ++RK+G G F  V    D +  + VA+KVV+S + Y E A+ EI +L+ ++     D +G   VQ+ + F        HIC+VFE+LG  L  ++ K+NY+  P+  V++I +Q+L+ + ++H   R+IHTD+KPENIL  V+ +Y++
Sbjct:   64 KGGYHLVKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNGEMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIR 229          
BLAST of CX297861 vs. ExPASy Swiss-Prot
Match: SRPK2_MOUSE (Serine/threonine-protein kinase SRPK2 OS=Mus musculus GN=Srpk2 PE=1 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 2.271e-21
Identity = 59/157 (37.58%), Postives = 93/157 (59.24%), Query Frame = 1
Query:   58 KDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG---SRCVQIRNWFDYRN----HICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD-LRLIHTDLKPENIL 504
            K G++   +G+    RY ++RK+G G F  V  C D +    VA+KVV+S + Y E A+ EI +L+ ++  D S       VQ+ + F        H+C+VFE+LG  L  ++ K+NY+  PV  V+ I RQ+L+ + ++H   ++IHTD+KPENIL
Sbjct:   63 KGGYHPVKIGDLFNGRYHVIRKLGWGHFSTVWLCWDMQGKRFVAMKVVKSAQHYTETALDEIKLLKCVRESDPSDPNKDMVVQLIDDFKISGMNGIHVCMVFEVLGHHLLKWIIKSNYQGLPVRCVKSIIRQVLQGLDYLHSKCKIIHTDIKPENIL 219          
The following BLAST results are available for this feature:
BLAST of CX297861 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 176
Match NameE-valueIdentityDescription
HIPK3_RAT8.057e-2734.91Homeodomain-interacting protein kinase 3 OS=Rattus... [more]
HIPK3_MOUSE8.057e-2734.67Homeodomain-interacting protein kinase 3 OS=Mus mu... [more]
MBK1_CAEBR1.795e-2635.48Dual specificity tyrosine-phosphorylation-regulate... [more]
YAK1_ENCCU8.908e-2636.32Probable dual specificity protein kinase YAK1 homo... [more]
YAK1_YEAST1.519e-2532.51Dual specificity protein kinase YAK1 OS=Saccharomy... [more]
YAKA_DICDI2.592e-2531.19Probable serine/threonine-protein kinase yakA OS=D... [more]
MBK1_CAEEL3.385e-2534.56Dual specificity tyrosine-phosphorylation-regulate... [more]
PRP4B_DICDI4.138e-2331.34Serine/threonine-protein kinase prpf4B OS=Dictyost... [more]
SRPK1_MOUSE1.331e-2136.75Serine/threonine-protein kinase SRPK1 OS=Mus muscu... [more]
SRPK2_MOUSE2.271e-2137.58Serine/threonine-protein kinase SRPK2 OS=Mus muscu... [more]

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Properties
Property NameValue
Genbank descriptionC06006A06SK RindPdig24 Citrus clementina cDNA clone C06006A06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX297861 ID=CX297861; Name=CX297861; organism=Citrus clementina; type=EST; length=684bp
GAGGTGTTTGTAAAGGGATTGGCTCAAAATGGCACTCCCCAATGGCGAAA
TGATGACAAAGATGGACATTACCTGTTTGCGCTTGGAGAGAATTTAACTT
CTCGCTATAAAATCCTCAGAAAAATTGGTGAAGGAACTTTTGGTCAGGTT
TTGGATTGTTTAGATAGGGAAACAGGAGAGACGGTTGCCATAAAAGTTGT
GCGAAGTATTAAGAAATACCGTGAAGCAGCAATGACAGAAATTGATGTGC
TTGAGTTGCTCAAAAGATATGACAGAAGTGGCAGTCGTTGTGTTCAAATA
AGGAACTGGTTTGACTATCGTAACCATATCTGTATCGTGTTTGAGATGCT
TGGACCTAGCCTATACGATTTTCTTCGGAAAAATAATTATCGCCCATTTC
CGGTTGATCTTGTCCGTGAGATTGGCAGACAACTGTTGGAATGTGTAGCA
TTCATGCATGATTTGCGCCTCATCCATACCGACTTGAAGCCTGAGAATAT
ACTTTTTGTTTCTCCGGAATACTTGAAAATACCTGACTACAAGGTTACGG
CCCGATCACCAACTGATGTGAACTATTACAAGAGGTTGCCAAAGTCAAGT
GCTATTAAGGTTATTGATTTTGGAAGCACAGCATATGAGCATCAAGAACA
CAACTATATTGTCTCCACCAGGCACTACCGTGCT
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