CX297861

Overview
NameCX297861
Unique NameCX297861
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length684
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX297861 vs. ExPASy Swiss-Prot
Match: SRPK2_HUMAN (Serine/threonine-protein kinase SRPK2 OS=Homo sapiens GN=SRPK2 PE=1 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 2.271e-21
Identity = 59/157 (37.58%), Postives = 93/157 (59.24%), Query Frame = 1
Query:   58 KDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG---SRCVQIRNWFDYRN----HICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD-LRLIHTDLKPENIL 504
            K G++   +G+    RY ++RK+G G F  V  C D +    VA+KVV+S + Y E A+ EI +L+ ++  D S       VQ+ + F        H+C+VFE+LG  L  ++ K+NY+  PV  V+ I RQ+L+ + ++H   ++IHTD+KPENIL
Sbjct:   65 KGGYHPVKIGDLFNGRYHVIRKLGWGHFSTVWLCWDMQGKRFVAMKVVKSAQHYTETALDEIKLLKCVRESDPSDPNKDMVVQLIDDFKISGMNGIHVCMVFEVLGHHLLKWIIKSNYQGLPVRCVKSIIRQVLQGLDYLHSKCKIIHTDIKPENIL 221          
BLAST of CX297861 vs. ExPASy Swiss-Prot
Match: SRPK1_PONAB (Serine/threonine-protein kinase SRPK1 OS=Pongo abelii GN=SRPK1 PE=2 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 6.606e-21
Identity = 59/166 (35.54%), Postives = 103/166 (62.05%), Query Frame = 1
Query:   58 KDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYD-RSGSRCVQIRNWFDYR------NHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH-DLRLIHTDLKPENILF-VSPEYLK 528
            K G++L  +G+    RY ++RK+G G F  V    D +  + VA+KVV+S + Y E A+ EI +L+ ++  D    +R + ++   D++       HIC+VFE+LG  L  ++ K+NY+  P+  V++I +Q+L+ + ++H   R+IHTD+KPENIL  V+ +Y++
Sbjct:   64 KGGYHLVKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIR 229          
BLAST of CX297861 vs. ExPASy Swiss-Prot
Match: SRPK1_HUMAN (Serine/threonine-protein kinase SRPK1 OS=Homo sapiens GN=SRPK1 PE=1 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 6.606e-21
Identity = 59/166 (35.54%), Postives = 103/166 (62.05%), Query Frame = 1
Query:   58 KDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYD-RSGSRCVQIRNWFDYR------NHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH-DLRLIHTDLKPENILF-VSPEYLK 528
            K G++L  +G+    RY ++RK+G G F  V    D +  + VA+KVV+S + Y E A+ EI +L+ ++  D    +R + ++   D++       HIC+VFE+LG  L  ++ K+NY+  P+  V++I +Q+L+ + ++H   R+IHTD+KPENIL  V+ +Y++
Sbjct:   64 KGGYHLVKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIR 229          
BLAST of CX297861 vs. ExPASy Swiss-Prot
Match: SPK1_CAEEL (Serine/threonine-protein kinase spk-1 OS=Caenorhabditis elegans GN=spk-1 PE=1 SV=3)

HSP 1 Score: 100.908 bits (250), Expect = 6.606e-21
Identity = 64/180 (35.56%), Postives = 106/180 (58.89%), Query Frame = 1
Query:   46 RNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRC---VQIRNWFDYR----NHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD-LRLIHTDLKPENILF-VSPEYLKI-PDYKVTAR 555
            R+  + G++   +G+   +RY ++RK+G G F  V    D +    VA+K+V+S + Y EAA+ EI +L  ++  D +   C   VQ+ + F        H+ +VFE+LG +L   + ++NYR   ++ VR+I RQ+LE + +MH+   +IHTD+KPEN+L  +S E +KI   + V AR
Sbjct:  402 RDYKRGGYHPVNIGDVFNARYHVIRKLGWGHFSTVWLAWDTQDKRFVAMKIVKSAEHYTEAALDEIKLLLSVRSADPNDIGCHKVVQLLDEFTVTGINGQHVAMVFEVLGCNLLKLIIRSNYRGLHLEQVRKICRQVLEALGYMHEKCGIIHTDIKPENVLITMSREEIKIMAQHAVVAR 581          
BLAST of CX297861 vs. ExPASy Swiss-Prot
Match: SRPK3_MOUSE (Serine/threonine-protein kinase SRPK3 OS=Mus musculus GN=Srpk3 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.127e-20
Identity = 61/166 (36.75%), Postives = 95/166 (57.23%), Query Frame = 1
Query:   58 KDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSR---CVQIRNWFDYRN----HICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH-DLRLIHTDLKPENILF-VSPEYLK 528
            K G+Y   +G+    RY ++RK+G G F  V  C D +    VA+KVV+S   Y E A+ EI +L+ ++  D S  +    VQ+ + F        H+C+V E+LG  L  ++ K+NY+  PV  V+ I RQ+L  + ++H   ++IHTD+KPENIL  V   Y++
Sbjct:   62 KGGYYPVKIGDLFNGRYHVVRKLGWGHFSTVWLCWDIQRKRFVALKVVKSAGHYTETAVDEIKLLKCVRDSDPSDPKRETIVQLIDDFRISGVNGVHVCMVLEVLGHQLLKWIIKSNYQGLPVPCVKSIVRQVLHGLDYLHTKCKIIHTDIKPENILLCVGDAYIR 227          
BLAST of CX297861 vs. ExPASy Swiss-Prot
Match: SPK1_CAEBR (Serine/threonine-protein kinase spk-1 OS=Caenorhabditis briggsae GN=spk-1 PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.472e-20
Identity = 63/180 (35.00%), Postives = 105/180 (58.33%), Query Frame = 1
Query:   46 RNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRC---VQIRNWFDYR----NHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD-LRLIHTDLKPENILF-VSPEYLKI-PDYKVTAR 555
            R+  + G++   +G+   SRY ++RK+G G F  V    D +     A+K+V+S + Y EAA+ EI +L  ++  D   + C   VQ+ + F        H+ +VFE+LG +L   + ++NYR   ++ VR+I +Q+LE + +MH+   +IHTD+KPEN+L  +S E +KI   + V AR
Sbjct:  114 RDYKRGGYHPVNIGDVFNSRYHVIRKLGWGHFSTVWLAWDTQEKRFTAMKIVKSAEHYTEAALDEIKLLLSVRGADPEDTGCHKVVQLLDEFTVTGINGQHVAMVFEVLGCNLLKLIIRSNYRGLHLEQVRKICKQILEALRYMHEKCGIIHTDIKPENVLITMSREEIKIMAQHAVVAR 293          
BLAST of CX297861 vs. ExPASy Swiss-Prot
Match: PRP4_SCHPO (Serine/threonine-protein kinase prp4 OS=Schizosaccharomyces pombe GN=prp4 PE=1 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 1.472e-20
Identity = 68/215 (31.63%), Postives = 107/215 (49.77%), Query Frame = 1
Query:   52 DDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSR-CVQIRNWFDYRNHICIVFEMLGPSLYDFLRK-NNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST--AYEHQEHNYIVSTRHYRA 684
            DD +G+Y   L E L SRY +   +G+G F  V+  LDR   +T AIK++R+ +   +  + E+ +LE L+  DR G +  +     F ++NH+C+VFEML  +L D L+K        +  VR    Q+   +  +    +IH+D+KP+N+L                     VN      K + +K+ D GS   A E++   Y+VS R YRA
Sbjct:  141 DDIEGYYKVVLMEELDSRYIVQSNLGKGMFSTVVSALDRNRNQTFAIKIIRNNEVMYKEGLKEVSILERLQAADREGKQHIIHYERHFMHKNHLCMVFEMLSLNLRDILKKFGRNVGLSIKAVRLYAYQMFMALDLLKQCNVIHSDIKPDNML---------------------VN-----EKRNILKICDLGSASDASENEITPYLVS-RFYRA 328          
BLAST of CX297861 vs. ExPASy Swiss-Prot
Match: DSK1_SCHPO (Protein kinase dsk1 OS=Schizosaccharomyces pombe GN=dsk1 PE=2 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 1.472e-20
Identity = 61/177 (34.46%), Postives = 99/177 (55.93%), Query Frame = 1
Query:   64 GHYLFALGENLTSR-YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDR---SGSRCVQIRNWFDYRN----HICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH-DLRLIHTDLKPENILF-VSPEYLKIPDYKVTARSPT 564
            G++   +GE    R Y + RK+G G F  V    DR     VA+KVVRS + YRE ++ EI +L+ ++  D         + + ++F +R     H+C+VFE+LG +L   ++   +R  PV +V++I  QLL  + ++H +  +IHTDLKPEN+L  +  + L+  +   T  SPT
Sbjct:   66 GYHPVYIGEEFHHRRYVVERKLGWGHFSTVWLAYDRAAKRRVALKVVRSAEHYRETSIDEIRILQKIREGDEKHLGKKHIISLLDYFVHRGPNGAHVCMVFEVLGENLLSLIQSYGHRGVPVGIVKQIAYQLLIALDYLHRECGIIHTDLKPENVLICIDQDALQHIEAPATTSSPT 242          
BLAST of CX297861 vs. ExPASy Swiss-Prot
Match: SRPK3_HUMAN (Serine/threonine-protein kinase SRPK3 OS=Homo sapiens GN=SRPK3 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.282e-20
Identity = 60/166 (36.14%), Postives = 95/166 (57.23%), Query Frame = 1
Query:   58 KDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSR---CVQIRNWFDYRN----HICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH-DLRLIHTDLKPENILF-VSPEYLK 528
            K G++   +G+    RY ++RK+G G F  V  C D +    VA+KVV+S   Y E A+ EI +L+ ++  D S  +    VQ+ + F        H+C+V E+LG  L  ++ K+NY+  PV  V+ I RQ+L  + ++H   ++IHTD+KPENIL  V   Y++
Sbjct:   63 KGGYHPVKIGDVFNGRYHVVRKLGWGHFSTVWLCWDIQRKRFVALKVVKSAGHYTETAVDEIKLLKCVRDSDPSDPKRETIVQLIDDFRISGVNGVHVCMVLEVLGHQLLKWIIKSNYQGLPVPCVKSIVRQVLHGLDYLHTKCKIIHTDIKPENILLCVGDAYIR 228          
BLAST of CX297861 vs. ExPASy Swiss-Prot
Match: HIPK4_MACFA (Homeodomain-interacting protein kinase 4 OS=Macaca fascicularis GN=HIPK4 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.625e-19
Identity = 62/206 (30.10%), Postives = 101/206 (49.03%), Query Frame = 1
Query:   79 ALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYI----VSTRHYRA 684
            A  ++ T  Y I+  +G+GTFG+V     R TGE VAIK++++          E+ +L  ++  D   +  ++   +F       +VFE+L  +L++F ++NN+ P P   +R +  Q+L  +A + +L +IH DLKPENI+ V              R P              +KVIDFGS +    E  Y+    + +R YRA
Sbjct:    2 ATTQSETDCYDIIEVLGKGTFGEVAKGWRRSTGEMVAIKILKNDAYRNRIIKNELKLLHCMRGLDPEEAHVIRFLEFFHDALKFYLVFELLEQNLFEFQKENNFAPLPARHIRTVTLQVLRALARLKELAIIHADLKPENIMLVD-----------QTRCP------------FRVKVIDFGSASI-FSEVRYVKEPYIQSRFYRA 183          
The following BLAST results are available for this feature:
BLAST of CX297861 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 176
Match NameE-valueIdentityDescription
SRPK2_HUMAN2.271e-2137.58Serine/threonine-protein kinase SRPK2 OS=Homo sapi... [more]
SRPK1_PONAB6.606e-2135.54Serine/threonine-protein kinase SRPK1 OS=Pongo abe... [more]
SRPK1_HUMAN6.606e-2135.54Serine/threonine-protein kinase SRPK1 OS=Homo sapi... [more]
SPK1_CAEEL6.606e-2135.56Serine/threonine-protein kinase spk-1 OS=Caenorhab... [more]
SRPK3_MOUSE1.127e-2036.75Serine/threonine-protein kinase SRPK3 OS=Mus muscu... [more]
SPK1_CAEBR1.472e-2035.00Serine/threonine-protein kinase spk-1 OS=Caenorhab... [more]
PRP4_SCHPO1.472e-2031.63Serine/threonine-protein kinase prp4 OS=Schizosacc... [more]
DSK1_SCHPO1.472e-2034.46Protein kinase dsk1 OS=Schizosaccharomyces pombe G... [more]
SRPK3_HUMAN4.282e-2036.14Serine/threonine-protein kinase SRPK3 OS=Homo sapi... [more]
HIPK4_MACFA3.625e-1930.10Homeodomain-interacting protein kinase 4 OS=Macaca... [more]

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Properties
Property NameValue
Genbank descriptionC06006A06SK RindPdig24 Citrus clementina cDNA clone C06006A06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX297861 ID=CX297861; Name=CX297861; organism=Citrus clementina; type=EST; length=684bp
GAGGTGTTTGTAAAGGGATTGGCTCAAAATGGCACTCCCCAATGGCGAAA
TGATGACAAAGATGGACATTACCTGTTTGCGCTTGGAGAGAATTTAACTT
CTCGCTATAAAATCCTCAGAAAAATTGGTGAAGGAACTTTTGGTCAGGTT
TTGGATTGTTTAGATAGGGAAACAGGAGAGACGGTTGCCATAAAAGTTGT
GCGAAGTATTAAGAAATACCGTGAAGCAGCAATGACAGAAATTGATGTGC
TTGAGTTGCTCAAAAGATATGACAGAAGTGGCAGTCGTTGTGTTCAAATA
AGGAACTGGTTTGACTATCGTAACCATATCTGTATCGTGTTTGAGATGCT
TGGACCTAGCCTATACGATTTTCTTCGGAAAAATAATTATCGCCCATTTC
CGGTTGATCTTGTCCGTGAGATTGGCAGACAACTGTTGGAATGTGTAGCA
TTCATGCATGATTTGCGCCTCATCCATACCGACTTGAAGCCTGAGAATAT
ACTTTTTGTTTCTCCGGAATACTTGAAAATACCTGACTACAAGGTTACGG
CCCGATCACCAACTGATGTGAACTATTACAAGAGGTTGCCAAAGTCAAGT
GCTATTAAGGTTATTGATTTTGGAAGCACAGCATATGAGCATCAAGAACA
CAACTATATTGTCTCCACCAGGCACTACCGTGCT
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