CX297861

Overview
NameCX297861
Unique NameCX297861
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length684
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX297861 vs. ExPASy Swiss-Prot
Match: PHO85_KLULA (Negative regulator of the PHO system OS=Kluyveromyces lactis GN=PHO85 PE=3 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 4.586e-14
Identity = 52/166 (31.33%), Postives = 89/166 (53.61%), Query Frame = 1
Query:  100 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR--SIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFL----RKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYY 579
            S++K L K+G GT+  V   L++ TG  VA+K V+  S +     A+ EI +++ LK         V++ +     N + +VFE +   L  F+    + N+++   +DLV+    QLL+ VAF H+ R++H DLKP+N+L  +   LK+ D+ +       VN +
Sbjct:    5 SQFKQLEKVGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH-----DNIVRLFDVIHTENKLTLVFEFMDNDLKKFMDNRNKGNSHKGLEMDLVKYFQWQLLQGVAFCHENRILHRDLKPQNLLINNRGQLKLGDFGLARAFGIPVNTF 165          
BLAST of CX297861 vs. ExPASy Swiss-Prot
Match: CDK2_RAT (Cell division protein kinase 2 OS=Rattus norvegicus GN=Cdk2 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.586e-14
Identity = 48/158 (30.38%), Postives = 80/158 (50.63%), Query Frame = 1
Query:  106 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYY 579
            ++ + KIGEGT+G V    ++ TGE VA+K +R   +      T I  + LLK  +      V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H  R++H DLKP+N+L  +   +K+ D+ +       V  Y
Sbjct:    4 FQKVEKIGEGTYGVVYKAKNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN--IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGLPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINAEGSIKLADFGLARAFGVPVRTY 159          
BLAST of CX297861 vs. ExPASy Swiss-Prot
Match: CDK2_MOUSE (Cell division protein kinase 2 OS=Mus musculus GN=Cdk2 PE=1 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 4.586e-14
Identity = 48/158 (30.38%), Postives = 80/158 (50.63%), Query Frame = 1
Query:  106 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYY 579
            ++ + KIGEGT+G V    ++ TGE VA+K +R   +      T I  + LLK  +      V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H  R++H DLKP+N+L  +   +K+ D+ +       V  Y
Sbjct:    4 FQKVEKIGEGTYGVVYKAKNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN--IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINAEGSIKLADFGLARAFGVPVRTY 159          
BLAST of CX297861 vs. ExPASy Swiss-Prot
Match: CDK2_HUMAN (Cell division protein kinase 2 OS=Homo sapiens GN=CDK2 PE=1 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 4.586e-14
Identity = 48/158 (30.38%), Postives = 80/158 (50.63%), Query Frame = 1
Query:  106 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYY 579
            ++ + KIGEGT+G V    ++ TGE VA+K +R   +      T I  + LLK  +      V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H  R++H DLKP+N+L  +   +K+ D+ +       V  Y
Sbjct:    4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN--IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 159          
BLAST of CX297861 vs. ExPASy Swiss-Prot
Match: CDK2_CRIGR (Cell division protein kinase 2 OS=Cricetulus griseus GN=CDK2 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.586e-14
Identity = 48/158 (30.38%), Postives = 80/158 (50.63%), Query Frame = 1
Query:  106 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYY 579
            ++ + KIGEGT+G V    ++ TGE VA+K +R   +      T I  + LLK  +      V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H  R++H DLKP+N+L  +   +K+ D+ +       V  Y
Sbjct:    4 FQKVEKIGEGTYGVVYKAKNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN--IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASAVTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINAEGSIKLADFGLARAFGVPVRTY 159          
BLAST of CX297861 vs. ExPASy Swiss-Prot
Match: CDK2_BOVIN (Cell division protein kinase 2 OS=Bos taurus GN=CDK2 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.586e-14
Identity = 48/158 (30.38%), Postives = 80/158 (50.63%), Query Frame = 1
Query:  106 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYY 579
            ++ + KIGEGT+G V    ++ TGE VA+K +R   +      T I  + LLK  +      V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H  R++H DLKP+N+L  +   +K+ D+ +       V  Y
Sbjct:    4 FQKVEKIGEGTYGVVYKAKNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN--IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINADGSIKLADFGLARAFGVPVRTY 159          
BLAST of CX297861 vs. ExPASy Swiss-Prot
Match: Y8078_DICDI (Probable serine/threonine-protein kinase DDB_G0268078 OS=Dictyostelium discoideum GN=DDB_G0268078 PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 7.822e-14
Identity = 52/150 (34.67%), Postives = 82/150 (54.67%), Query Frame = 1
Query:  103 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYRE----AAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDY 540
            +Y+ ++++G+G +G V+  +D +TGE VAIK  R  KK+ +      + EI  L+ LK         V++      R+ +  VFE L  +LY+ + K+  +  P   +R I  Q+L+ + FMH     H DLKPENI+ V  E LKI D+
Sbjct:    3 KYQFIKQVGDGAYGDVIKAIDVKTGEIVAIK--RMKKKFSDWKECIQLREIKALKKLKH-----PNIVKLLEIILERDELFFVFEYLENNLYESI-KDRTKLLPETTIRNIIYQILQALHFMHTNGFFHRDLKPENIMLVG-ERLKIADF 143          
BLAST of CX297861 vs. ExPASy Swiss-Prot
Match: CDKD1_ORYSI (Cyclin-dependent kinase D-1 OS=Oryza sativa subsp. indica GN=CDKD-1 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.022e-13
Identity = 51/155 (32.90%), Postives = 83/155 (53.55%), Query Frame = 1
Query:   88 ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYRE----AAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDY 540
            + +  RY     +GEGT+G V    D +TG TVAIK +R + KY+E     A+ EI +L+ LK      S  +++ + F Y+ ++ +VFE +   L   +R  N    P D    I + +L+ +AF H   ++H D+KP N+L  +   LK+ D+
Sbjct:   13 KRVADRYLKREVLGEGTYGVVFKADDTKTGNTVAIKKIR-LGKYKEGVNFTALREIKLLKELK-----DSNIIELIDAFPYKGNLHLVFEFMETDLEAVIRDRNIVLSPADTKSYI-QMMLKGLAFCHKKWVLHRDMKPNNLLIGADGQLKLADF 160          
BLAST of CX297861 vs. ExPASy Swiss-Prot
Match: SMKY_MOUSE (Sperm motility kinase Y OS=Mus musculus PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.743e-13
Identity = 45/155 (29.03%), Postives = 85/155 (54.84%), Query Frame = 1
Query:   94 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTAR 555
            L S+YK++R +G GT+ +VL      TG  VA+KV+   K   + AM E ++++ +K         V +   F+ +    ++ E++ G  LY++++ + +     D  R+I  Q+L  V++ H L ++H DLKP+NI+      +KI D+ ++ +
Sbjct:   24 LYSQYKVVRTLGHGTYAKVLLAKHWLTGTPVAVKVLLKNKPCFQPAMKEANIMKKIKH-----PNIVSLLQVFETKTRGYLIMELVEGQELYEYIKSSGH--IEEDEARQIFLQILSAVSYCHGLGIVHRDLKPDNIMIDDKGSIKIIDFGLSTQ 171          
BLAST of CX297861 vs. ExPASy Swiss-Prot
Match: CDK3_HUMAN (Cell division protein kinase 3 OS=Homo sapiens GN=CDK3 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.276e-13
Identity = 46/145 (31.72%), Postives = 74/145 (51.03%), Query Frame = 1
Query:  106 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDY 540
            ++ + KIGEGT+G V    +RETG+ VA+K +R   +      T I  + LLK         V++ +       + +VFE L   L  ++        P+ L++    QLL+ V+F H  R+IH DLKP+N+L      +K+ D+
Sbjct:    4 FQKVEKIGEGTYGVVYKAKNRETGQLVALKKIRLDLEMEGVPSTAIREISLLKELKHPN--IVRLLDVVHNERKLYLVFEFLSQDLKKYMDSTPGSELPLHLIKSYLFQLLQGVSFCHSHRVIHRDLKPQNLLINELGAIKLADF 146          
The following BLAST results are available for this feature:
BLAST of CX297861 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 176
Match NameE-valueIdentityDescription
PHO85_KLULA4.586e-1431.33Negative regulator of the PHO system OS=Kluyveromy... [more]
CDK2_RAT4.586e-1430.38Cell division protein kinase 2 OS=Rattus norvegicu... [more]
CDK2_MOUSE4.586e-1430.38Cell division protein kinase 2 OS=Mus musculus GN=... [more]
CDK2_HUMAN4.586e-1430.38Cell division protein kinase 2 OS=Homo sapiens GN=... [more]
CDK2_CRIGR4.586e-1430.38Cell division protein kinase 2 OS=Cricetulus grise... [more]
CDK2_BOVIN4.586e-1430.38Cell division protein kinase 2 OS=Bos taurus GN=CD... [more]
Y8078_DICDI7.822e-1434.67Probable serine/threonine-protein kinase DDB_G0268... [more]
CDKD1_ORYSI1.022e-1332.90Cyclin-dependent kinase D-1 OS=Oryza sativa subsp.... [more]
SMKY_MOUSE1.743e-1329.03Sperm motility kinase Y OS=Mus musculus PE=2 SV=1[more]
CDK3_HUMAN2.276e-1331.72Cell division protein kinase 3 OS=Homo sapiens GN=... [more]

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Properties
Property NameValue
Genbank descriptionC06006A06SK RindPdig24 Citrus clementina cDNA clone C06006A06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX297861 ID=CX297861; Name=CX297861; organism=Citrus clementina; type=EST; length=684bp
GAGGTGTTTGTAAAGGGATTGGCTCAAAATGGCACTCCCCAATGGCGAAA
TGATGACAAAGATGGACATTACCTGTTTGCGCTTGGAGAGAATTTAACTT
CTCGCTATAAAATCCTCAGAAAAATTGGTGAAGGAACTTTTGGTCAGGTT
TTGGATTGTTTAGATAGGGAAACAGGAGAGACGGTTGCCATAAAAGTTGT
GCGAAGTATTAAGAAATACCGTGAAGCAGCAATGACAGAAATTGATGTGC
TTGAGTTGCTCAAAAGATATGACAGAAGTGGCAGTCGTTGTGTTCAAATA
AGGAACTGGTTTGACTATCGTAACCATATCTGTATCGTGTTTGAGATGCT
TGGACCTAGCCTATACGATTTTCTTCGGAAAAATAATTATCGCCCATTTC
CGGTTGATCTTGTCCGTGAGATTGGCAGACAACTGTTGGAATGTGTAGCA
TTCATGCATGATTTGCGCCTCATCCATACCGACTTGAAGCCTGAGAATAT
ACTTTTTGTTTCTCCGGAATACTTGAAAATACCTGACTACAAGGTTACGG
CCCGATCACCAACTGATGTGAACTATTACAAGAGGTTGCCAAAGTCAAGT
GCTATTAAGGTTATTGATTTTGGAAGCACAGCATATGAGCATCAAGAACA
CAACTATATTGTCTCCACCAGGCACTACCGTGCT
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