CX298063
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX298063 vs. ExPASy Swiss-Prot
Match: RL4_MACFA (60S ribosomal protein L4 OS=Macaca fascicularis GN=RPL4 PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.236e-21 Identity = 48/94 (51.06%), Postives = 66/94 (70.21%), Query Frame = 3 Query: 3 WTKSAFEKLDEIYGKFDKGSEKKKGYVLPRAKMVNADLARIINSDEVQSVVRPIKTEVKRAPMKKNPLKNLNTMLRLNPYAKTARRMSLLAEAQ 284 WT+SAF KLDE+YG + K + K Y LP KM+N DL+RI+ S E+Q +R + ++ R +KKNPLKNL ML+LNPYAKT R ++L +A+ Sbjct: 252 WTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRWNTILRQAR 345
BLAST of CX298063 vs. ExPASy Swiss-Prot
Match: RL4_DICDI (60S ribosomal protein L4 OS=Dictyostelium discoideum GN=rpl4 PE=1 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 7.208e-21 Identity = 50/89 (56.18%), Postives = 65/89 (73.03%), Query Frame = 3 Query: 3 WTKSAFEKLDEIYGKFDKGSEKKKGYVLPRAKMVNADLARIINSDEVQSVVRPIKTEVKR--APMKK-NPLKNLNTMLRLNPYAKTARR 260 WTKSAFE+LD +G F K S +KKGY LPR + NAD+ R++NSDE+Q+ VR K VKR AP+++ NPLKNL M++LNP A + RR Sbjct: 251 WTKSAFEQLDSTFGTFAKSSAQKKGYTLPRPMIANADIVRLVNSDEIQAAVRASKVVVKRPTAPVRRSNPLKNLRAMIKLNPAAVSTRR 339
BLAST of CX298063 vs. ExPASy Swiss-Prot
Match: RL4_CANFA (60S ribosomal protein L4 OS=Canis familiaris GN=RPL4 PE=1 SV=2) HSP 1 Score: 94.7449 bits (234), Expect = 5.166e-19 Identity = 45/94 (47.87%), Postives = 63/94 (67.02%), Query Frame = 3 Query: 3 WTKSAFEKLDEIYGKFDKGSEKKKGYVLPRAKMVNADLARIINSDEVQSVVRPIKTEVKRAPMKKNPLKNLNTMLRLNPYAKTARRMSLLAEAQ 284 WT+SAF KLD++YG + K + K Y LP KM+N DL+RI+ +R + ++ R +KKNPLKNL ML+LNPYAKT RR ++L +A+ Sbjct: 252 WTESAFRKLDDLYGTWRKAASLKSNYNLPMHKMLNTDLSRILKMPRDPRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQAK 345
BLAST of CX298063 vs. ExPASy Swiss-Prot
Match: RL4_URECA (60S ribosomal protein L4 OS=Urechis caupo GN=RPL4 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.459e-18 Identity = 43/96 (44.79%), Postives = 62/96 (64.58%), Query Frame = 3 Query: 3 WTKSAFEKLDEIYGKFDKGSEKKKGYVLPRAKMVNADLARIINSDEVQSVVRPIKTEVKRAPMKKNPLKNLNTMLRLNPYAKTARRMSLLAEAQRV 290 WT+SAF++LD IYG + + S +K Y LP KM N DL+R++ SDE+Q+ +R K + R KKNPLKN M+RLNP+A + + E +R+ Sbjct: 251 WTESAFKQLDNIYGTWKRPSAEKSHYNLPMPKMTNTDLSRLLKSDEIQNALREPKKDKARRLQKKNPLKNYRVMMRLNPFAGAQKAAAKAVEQRRL 346
BLAST of CX298063 vs. ExPASy Swiss-Prot
Match: RL4_DROME (60S ribosomal protein L4 OS=Drosophila melanogaster GN=RpL4 PE=2 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 2.170e-17 Identity = 40/95 (42.11%), Postives = 66/95 (69.47%), Query Frame = 3 Query: 3 WTKSAFEKLDEIYGKFDKGSEKKKGYVLPRAKMVNADLARIINSDEVQSVVRPIKTEVKRAPMKKNPLKNLNTMLRLNPYAKTARRMSLLAEAQR 287 WT+SAF +L++++G + K S KKGY LP+ KM N DL+R++ S+E++ V+R + V R+ + NPL N+ +++LNPYA+ +R + LA +R Sbjct: 255 WTESAFARLNDLFGTWKKPSTLKKGYNLPQPKMANTDLSRLLKSEEIRKVLRDPRKRVFRSVRRLNPLTNVRQLIKLNPYAEVLKRRAALAAEKR 349
BLAST of CX298063 vs. ExPASy Swiss-Prot
Match: RL4A_SCHPO (60S ribosomal protein L4-A OS=Schizosaccharomyces pombe GN=rpl4a PE=1 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 6.981e-16 Identity = 44/84 (52.38%), Postives = 58/84 (69.05%), Query Frame = 3 Query: 3 WTKSAFEKLDEIYGKFDKGSEKKKGYVLPRAKMVNADLARIINSDEVQSVVRPI-KTEVKRAPM-KKNPLKNLNTMLRLNPYAK 248 WTKSAF LD ++G + ++ KK Y LP + NAD+ R+INSDE+QS+V+ + VKRA + KKNPLKN + RLNPYAK Sbjct: 252 WTKSAFGLLDSVFGSTTEAAQLKKNYFLPENIISNADVTRLINSDEIQSIVKAAGPSRVKRAHVQKKNPLKNKAVLARLNPYAK 335
BLAST of CX298063 vs. ExPASy Swiss-Prot
Match: RL4B_SCHPO (60S ribosomal protein L4-B OS=Schizosaccharomyces pombe GN=rpl4b PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.031e-15 Identity = 44/84 (52.38%), Postives = 58/84 (69.05%), Query Frame = 3 Query: 3 WTKSAFEKLDEIYGKFDKGSEKKKGYVLPRAKMVNADLARIINSDEVQSVVRPI-KTEVKRAPM-KKNPLKNLNTMLRLNPYAK 248 WTKSAF LD ++G + ++ KK Y LP + NAD+ R+INSDE+QS+V+ + VKRA + KKNPLKN + RLNPYAK Sbjct: 252 WTKSAFGLLDSVFGSTTEVAQLKKNYFLPENIISNADVTRLINSDEIQSIVKAAGPSRVKRAHVQKKNPLKNKAVLSRLNPYAK 335
BLAST of CX298063 vs. ExPASy Swiss-Prot
Match: RL4B_YEAST (60S ribosomal protein L4-B OS=Saccharomyces cerevisiae GN=RPL4B PE=1 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 2.246e-14 Identity = 40/84 (47.62%), Postives = 56/84 (66.67%), Query Frame = 3 Query: 3 WTKSAFEKLDEIYGKFDKGSEKKKGYVLPRAKMVNADLARIINSDEVQSVVRPI--KTEVKRAPMKKNPLKNLNTMLRLNPYAK 248 WT++AF KLD+++G + + K GY LP + +D+ RIINS E+QS +RP T+ + +KKNPLKN +LRLNPYAK Sbjct: 250 WTEAAFTKLDQVWGS-ETVASSKVGYTLPSHIISTSDVTRIINSSEIQSAIRPAGQATQKRTHVLKKNPLKNKQVLLRLNPYAK 332
BLAST of CX298063 vs. ExPASy Swiss-Prot
Match: RL4A_YEAST (60S ribosomal protein L4-A OS=Saccharomyces cerevisiae GN=RPL4A PE=1 SV=4) HSP 1 Score: 79.337 bits (194), Expect = 2.246e-14 Identity = 40/84 (47.62%), Postives = 56/84 (66.67%), Query Frame = 3 Query: 3 WTKSAFEKLDEIYGKFDKGSEKKKGYVLPRAKMVNADLARIINSDEVQSVVRPI--KTEVKRAPMKKNPLKNLNTMLRLNPYAK 248 WT++AF KLD+++G + + K GY LP + +D+ RIINS E+QS +RP T+ + +KKNPLKN +LRLNPYAK Sbjct: 250 WTEAAFTKLDQVWGS-ETVASSKVGYTLPSHIISTSDVTRIINSSEIQSAIRPAGQATQKRTHVLKKNPLKNKQVLLRLNPYAK 332
BLAST of CX298063 vs. ExPASy Swiss-Prot
Match: RL4_TRYBB (60S ribosomal protein L4 OS=Trypanosoma brucei brucei GN=RPL4 PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.534e-14 Identity = 38/91 (41.76%), Postives = 58/91 (63.74%), Query Frame = 3 Query: 3 WTKSAFEKLDEIYGKFDKGSEKKKGYVLPRAKMVNADLARIINSDEVQSVVRPIKTEVKRAPMKKNP---LKNLNTMLRLNPYAKTARRMS 266 WTKSAFEKLD+I+G F + S K G++LP + + D+ RI+ S+EV+ V++P K + KR + P ++N LRLNP+ K + M+ Sbjct: 250 WTKSAFEKLDKIFGTFTEPSTVKSGFMLPAPMLTSTDVTRIMQSEEVRRVLKPKKLQPKRPSRYRQPTNGIRNRRLRLRLNPFQKKEKAMA 340 The following BLAST results are available for this feature:
BLAST of CX298063 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 22
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Sequences
The
following sequences are available for this feature:
EST sequence >CX298063 ID=CX298063; Name=CX298063; organism=Citrus clementina; type=EST; length=723bpback to top |