CX298067

Overview
NameCX298067
Unique NameCX298067
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length361
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX298067 vs. ExPASy Swiss-Prot
Match: ALAT1_MOUSE (Alanine aminotransferase 1 OS=Mus musculus GN=Gpt PE=2 SV=3)

HSP 1 Score: 71.633 bits (174), Expect = 1.366e-12
Identity = 31/60 (51.67%), Postives = 42/60 (70.00%), Query Frame = 1
Query:    7 DVFYCLRLLEATGISTVPGSGFGQKEGVFHLRTTILPAEEDMPAIMESFKKFNDEFMEQY 186
            D+F+CL LLE TGI  VPGSGFGQ+EG +H R TILP  E +  ++E  + F+ +F  +Y
Sbjct:  436 DMFFCLCLLEETGICVVPGSGFGQQEGTYHFRMTILPPMEKLRVLLEKLRHFHAKFTHEY 495          
BLAST of CX298067 vs. ExPASy Swiss-Prot
Match: ALAT1_RAT (Alanine aminotransferase 1 OS=Rattus norvegicus GN=Gpt PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 3.042e-12
Identity = 31/60 (51.67%), Postives = 41/60 (68.33%), Query Frame = 1
Query:    7 DVFYCLRLLEATGISTVPGSGFGQKEGVFHLRTTILPAEEDMPAIMESFKKFNDEFMEQY 186
            D+F+CL LLE TGI  VPGSGFGQ+EG +H R TILP  E +  ++E    F+ +F  +Y
Sbjct:  436 DMFFCLCLLEETGICVVPGSGFGQQEGTYHFRMTILPPMEKLRLLLEKLSHFHAKFTHEY 495          
BLAST of CX298067 vs. ExPASy Swiss-Prot
Match: ALAM_YEAST (Probable alanine aminotransferase, mitochondrial OS=Saccharomyces cerevisiae GN=ALT1 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.510e-11
Identity = 35/62 (56.45%), Postives = 41/62 (66.13%), Query Frame = 1
Query:    7 DVFYCLRLLEATGISTVPGSGFGQKEGVFHLRTTILPAEEDMPAIMESFKKFNDEFMEQYED 192
            D FYC +LLE+TGI TVPGSGFGQ+ G +HLRTT L    +     ESF K   EF +QY D
Sbjct:  534 DEFYCKKLLESTGICTVPGSGFGQEPGTYHLRTTFLAPGLEWIKKWESFHK---EFFDQYRD 592          
The following BLAST results are available for this feature:
BLAST of CX298067 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
ALAT1_MOUSE1.366e-1251.67Alanine aminotransferase 1 OS=Mus musculus GN=Gpt ... [more]
ALAT1_RAT3.042e-1251.67Alanine aminotransferase 1 OS=Rattus norvegicus GN... [more]
ALAM_YEAST1.510e-1156.45Probable alanine aminotransferase, mitochondrial O... [more]

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Properties
Property NameValue
Genbank descriptionC06008C04SK RindPdig24 Citrus clementina cDNA clone C06008C04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX298067 ID=CX298067; Name=CX298067; organism=Citrus clementina; type=EST; length=361bp
GAGGCTGATGTTTTCTACTGTCTCCGGCTTTTGGAAGCCACTGGCATTTC
TACTGTCCCTGGTTCTGGATTTGGACAGAAAGAAGGGGTCTTCCATTTAA
GGACAACAATTTTACCGGCTGAGGAGGACATGCCAGCAATCATGGAGAGT
TTCAAGAAGTTCAATGATGAGTTCATGGAGCAATATGAAGACTACAGGGG
CTATTCAAGAATGTAAGGGACGTCCAAATTCCCAAAATTTGTATTATATT
ATTCAAAGGCTATAGAAAGCCATCGATATATGCTCCCTACTTTCGTCCTA
ACCCCTTTTTAGTAGGAAAAACTTCAGTCGCTTGAAGATTGCCCAAAAAA
AAAAAAAAAAA
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