CX298072
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX298072 vs. ExPASy Swiss-Prot
Match: ODB2_MOUSE (Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial OS=Mus musculus GN=Dbt PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.251e-13 Identity = 45/135 (33.33%), Postives = 74/135 (54.81%), Query Frame = 2 Query: 95 AVGTKKGLVVPVIRNSERMNFAEIEKEISTLAKKANDGSISIDEMAGGTFTISNGGVYGSLLSTPIINPPQSAILGMHSIVNRPMV-VGGNVVPRPMMYIALTYDHRLIDGREAVFFLRRIKDIVEDPRRLLLDI 496 A+ T+ GL+VP ++N + + I E++ L K + G + ++ GGTFT+SN G G + P+I PP+ AI + +I P G+V +M ++ + DHR+IDG F K +E+P +LLD+ Sbjct: 347 AMDTELGLIVPNVKNVQVRSVFGIGMELNRLQKLGSSGQLGTTDLTGGTFTLSNIGSIGGTYAKPVILPPEVAIGALGAIKALPRFDQKGDVYKAQIMNVSWSADHRVIDGATMSRFSNLWKSYLENPAFMLLDL 481
BLAST of CX298072 vs. ExPASy Swiss-Prot
Match: ODP2_RHIME (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex OS=Rhizobium meliloti GN=pdhC PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.787e-13 Identity = 40/132 (30.30%), Postives = 69/132 (52.27%), Query Frame = 2 Query: 95 AVGTKKGLVVPVIRNSERMNFAEIEKEISTLAKKANDGSISIDEMAGGTFTISNGGVYGSLLSTPIINPPQSAILGMHSIVNRPMVVGGNVVPRPMMYIALTYDHRLIDGREAVFFLRRIKDIVEDPRRLLL 490 AV GL+ P++R +E + + I E+ L K+A + + +E GGT +SN G+ G ++NPP + IL + + +R +V +V +M + L+ DHR +DG L K +E+P +L+ Sbjct: 316 AVSIPGGLITPIVRQAELKSLSAISNEMKDLGKRAKERKLKPEEYQGGTTAVSNMGMMGVKDFAAVVNPPHATILAVGAGEDRVVVRNKEMVIANVMTVTLSTDHRCVDGALGAELLAAFKRYIENPMGMLV 447
BLAST of CX298072 vs. ExPASy Swiss-Prot
Match: ODP2_MYCGE (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex OS=Mycoplasma genitalium GN=pdhC PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.359e-12 Identity = 45/159 (28.30%), Postives = 79/159 (49.69%), Query Frame = 2 Query: 2 AAVSALQHQPVVNAVXXXXXXXXXXXXXXS--FAVGTKKGLVVPVIRNSERMNFAEIEKEISTLAKKANDGSISIDEMAGGTFTISNGGVYGSLLSTPIINPPQSAILGMHSIVNRPMVVGGNVVPRPMMYIALTYDHRLIDGREAVFFLRRIKDIVED 472 A V+AL+ PV NA + AV T++GL+VP I+ ++ + EI + I LA KA I + ++ GT +++N G G+ + TPII P+ I+ ++ R + V + ++ + + DHR +DG + F + I +E+ Sbjct: 219 AIVNALKKFPVFNASYDPDQNEIVLNDDINVGIAVDTEEGLIVPNIKQAQTKSVVEIAQAIVDLANKARTKKIKLTDLNKGTISVTNFGSLGAAVGTPIIKYPEMCIVATGNLEERIVKVENGIAVHTILPLTIAADHRWVDGADVGRFGKEIAKQIEE 377
BLAST of CX298072 vs. ExPASy Swiss-Prot
Match: ODP2_MYCPN (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex OS=Mycoplasma pneumoniae GN=pdhC PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.024e-12 Identity = 37/126 (29.37%), Postives = 67/126 (53.17%), Query Frame = 2 Query: 95 AVGTKKGLVVPVIRNSERMNFAEIEKEISTLAKKANDGSISIDEMAGGTFTISNGGVYGSLLSTPIINPPQSAILGMHSIVNRPMVVGGNVVPRPMMYIALTYDHRLIDGREAVFFLRRIKDIVED 472 AV T GL+VP I+ ++ + +I K+I LA +A I + +++ GT +++N G G+ TPII P+ I+ ++ R + G V ++ + + DHR +DG + F + I +E+ Sbjct: 270 AVDTPDGLIVPNIKQAQTKSVVDIAKDIVDLANRARSKQIKLPDLSKGTISVTNFGSLGAAFGTPIIKHPEMCIVATGNMEERVVRAEGGVAVHTILPLTIAADHRWVDGADVGRFGKEIAKQIEE 395
BLAST of CX298072 vs. ExPASy Swiss-Prot
Match: Y1564_DICDI (Pyruvate dehydrogenase complex subunit homolog DDB_G0271564, mitochondrial OS=Dictyostelium discoideum GN=pdhX PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.529e-11 Identity = 34/79 (43.04%), Postives = 48/79 (60.76%), Query Frame = 2 Query: 89 SFAVGTKKGLVVPVIRNSERMNFAEIEKEISTLAKKANDGSISIDEMAGGTFTISNGGVYGSLLSTPIINPPQSAILGM 325 SFAV T +GL+ P+I N+++ I E LA KA DG + +E GGTF++SN G++G IIN PQ+ IL + Sbjct: 219 SFAVSTDRGLITPIITNTDKKQLLAISNESKQLALKARDGKLKPEEFIGGTFSVSNLGMFGITSFNAIINYPQAGILAI 297
BLAST of CX298072 vs. ExPASy Swiss-Prot
Match: KGD_MYCTU (2-oxoglutarate decarboxylase OS=Mycobacterium tuberculosis GN=kgd PE=1 SV=4) HSP 1 Score: 68.1662 bits (165), Expect = 5.811e-11 Identity = 40/127 (31.50%), Postives = 67/127 (52.76%), Query Frame = 2 Query: 107 KKGLVVPVIRNSERMNFAEIEKEISTLAKKANDGSISIDEMAGGTFTISNGGVYGSLLSTPIINPPQSAILGMHSIVNRPMVVGGNVVPR-------PMMYIALTYDHRLIDGREAVFFLRRIKDIV 466 K+ LVV I+ E M FA+ + ++A DG ++ ++ AG T +++N G G++ S P + P Q AI+G+ + P G R ++ + TYDHR+I G E+ FLR I +++ Sbjct: 210 KRSLVVAGIKRCETMRFAQFVTAYEDIVRRARDGKLTTEDFAGVTISLTNPGTIGTVHSVPRLMPGQGAIIGV-GAMEYPAEFQGASEERIAELGIGKLITLTSTYDHRIIQGAESGDFLRTIHELL 335
BLAST of CX298072 vs. ExPASy Swiss-Prot
Match: KGD_MYCTA (2-oxoglutarate decarboxylase OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=kgd PE=3 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 5.811e-11 Identity = 40/127 (31.50%), Postives = 67/127 (52.76%), Query Frame = 2 Query: 107 KKGLVVPVIRNSERMNFAEIEKEISTLAKKANDGSISIDEMAGGTFTISNGGVYGSLLSTPIINPPQSAILGMHSIVNRPMVVGGNVVPR-------PMMYIALTYDHRLIDGREAVFFLRRIKDIV 466 K+ LVV I+ E M FA+ + ++A DG ++ ++ AG T +++N G G++ S P + P Q AI+G+ + P G R ++ + TYDHR+I G E+ FLR I +++ Sbjct: 210 KRSLVVAGIKRCETMRFAQFVTAYEDIVRRARDGKLTTEDFAGVTISLTNPGTIGTVHSVPRLMPGQGAIIGV-GAMEYPAEFQGASEERIAELGIGKLITLTSTYDHRIIQGAESGDFLRTIHELL 335
BLAST of CX298072 vs. ExPASy Swiss-Prot
Match: KGD_MYCBP (2-oxoglutarate decarboxylase OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=kgd PE=3 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 5.811e-11 Identity = 40/127 (31.50%), Postives = 67/127 (52.76%), Query Frame = 2 Query: 107 KKGLVVPVIRNSERMNFAEIEKEISTLAKKANDGSISIDEMAGGTFTISNGGVYGSLLSTPIINPPQSAILGMHSIVNRPMVVGGNVVPR-------PMMYIALTYDHRLIDGREAVFFLRRIKDIV 466 K+ LVV I+ E M FA+ + ++A DG ++ ++ AG T +++N G G++ S P + P Q AI+G+ + P G R ++ + TYDHR+I G E+ FLR I +++ Sbjct: 210 KRSLVVAGIKRCETMRFAQFVTAYEDIVRRARDGKLTTEDFAGVTISLTNPGTIGTVHSVPRLMPGQGAIIGV-GAMEYPAEFQGASEERIAELGIGKLITLTSTYDHRIIQGAESGDFLRTIHELL 335
BLAST of CX298072 vs. ExPASy Swiss-Prot
Match: KGD_MYCBO (2-oxoglutarate decarboxylase OS=Mycobacterium bovis GN=kgd PE=3 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 5.811e-11 Identity = 40/127 (31.50%), Postives = 67/127 (52.76%), Query Frame = 2 Query: 107 KKGLVVPVIRNSERMNFAEIEKEISTLAKKANDGSISIDEMAGGTFTISNGGVYGSLLSTPIINPPQSAILGMHSIVNRPMVVGGNVVPR-------PMMYIALTYDHRLIDGREAVFFLRRIKDIV 466 K+ LVV I+ E M FA+ + ++A DG ++ ++ AG T +++N G G++ S P + P Q AI+G+ + P G R ++ + TYDHR+I G E+ FLR I +++ Sbjct: 210 KRSLVVAGIKRCETMRFAQFVTAYEDIVRRARDGKLTTEDFAGVTISLTNPGTIGTVHSVPRLMPGQGAIIGV-GAMEYPAEFQGASEERIAELGIGKLITLTSTYDHRIIQGAESGDFLRTIHELL 335
BLAST of CX298072 vs. ExPASy Swiss-Prot
Match: KGD_MYCVP (2-oxoglutarate decarboxylase OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=kgd PE=3 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 9.911e-11 Identity = 41/129 (31.78%), Postives = 66/129 (51.16%), Query Frame = 2 Query: 107 KKGLVVPVIRNSERMNFAEIEKEISTLAKKANDGSISIDEMAGGTFTISNGGVYGSLLSTPIINPPQSAILGMHSIVNRPMVVGGNVVPR-------PMMYIALTYDHRLIDGREAVFFLRRIKDIVED 472 K+ LVV I+N E M+F + + ++A DG ++ ++ AG T +++N G G++ S P + Q AI+G + P G R +M + TYDHR+I G E+ FLR I ++ D Sbjct: 226 KRSLVVAAIKNCETMHFGQFIAAYEDIVRRARDGKLTAEDFAGVTISLTNPGTIGTVHSVPRLMKGQGAIVGA-GAMEYPAEFQGASEERIAELGVGKLMTLTSTYDHRIIQGAESGDFLRTIHTLLLD 353 The following BLAST results are available for this feature:
BLAST of CX298072 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 100
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Sequences
The
following sequences are available for this feature:
EST sequence >CX298072 ID=CX298072; Name=CX298072; organism=Citrus clementina; type=EST; length=774bpback to top |