CX298077
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX298077 vs. ExPASy Swiss-Prot
Match: THIO_STAA8 (Thioredoxin OS=Staphylococcus aureus (strain NCTC 8325) GN=trxA PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.848e-13 Identity = 41/84 (48.81%), Postives = 53/84 (63.10%), Query Frame = 3 Query: 90 VVDFTASWCGPCRFIAPFLAELAKKLPNVL-FLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVG-SKKEELQQTIAKHL 335 +VDF A+WCGPC+ IAP L ELA LK+DVDE S A + V ++PT + K+G+ VDKVVG KE L + + KHL Sbjct: 21 LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQPVDKVVGFQPKENLAEVLDKHL 104
BLAST of CX298077 vs. ExPASy Swiss-Prot
Match: THIO_STAA3 (Thioredoxin OS=Staphylococcus aureus (strain USA300) GN=trxA PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.848e-13 Identity = 41/84 (48.81%), Postives = 53/84 (63.10%), Query Frame = 3 Query: 90 VVDFTASWCGPCRFIAPFLAELAKKLPNVL-FLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVG-SKKEELQQTIAKHL 335 +VDF A+WCGPC+ IAP L ELA LK+DVDE S A + V ++PT + K+G+ VDKVVG KE L + + KHL Sbjct: 21 LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQPVDKVVGFQPKENLAEVLDKHL 104
BLAST of CX298077 vs. ExPASy Swiss-Prot
Match: THIO_ECHGR (Thioredoxin OS=Echinococcus granulosus GN=TRX PE=3 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 1.848e-13 Identity = 36/91 (39.56%), Postives = 59/91 (64.84%), Query Frame = 3 Query: 51 EQLQKSNETKQLVVVDFTASWCGPCRFIAPFLAELAKKLPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGSKKEELQQTI 323 + L+ + + +L+V DF A+WCGPC+ +AP L +AK+ V+F+K+DVDE + VA + V AMPT + K G + VVG+ + +++ I Sbjct: 13 DALEAAIKGDKLLVCDFFATWCGPCKSLAPKLDAMAKENEKVIFVKLDVDECQDVAEKYRVTAMPTLIVFKNGCEIGHVVGANEAGIRELI 103
BLAST of CX298077 vs. ExPASy Swiss-Prot
Match: TRXF_MESCR (Thioredoxin F-type, chloroplastic OS=Mesembryanthemum crystallinum PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.414e-13 Identity = 38/80 (47.50%), Postives = 54/80 (67.50%), Query Frame = 3 Query: 87 VVVDFTASWCGPCRFIAPFLAELAKKLPNVLFLKVDVD-ELKSVATDWAVEAMPTFMFLKEGKIVDKVVGSKKEELQQTI 323 VV+D WCGPC+ +AP ELA+KL +V+FLK+D + E K +A + + +PTF LK GKIVD+V G+K ++L I Sbjct: 106 VVLDMYTQWCGPCKVMAPKYQELAEKLLDVVFLKLDCNQENKPLAKELGIRVVPTFKILKGGKIVDEVTGAKFDKLVAAI 185
BLAST of CX298077 vs. ExPASy Swiss-Prot
Match: THIO_STAES (Thioredoxin OS=Staphylococcus epidermidis (strain ATCC 12228) GN=trxA PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.414e-13 Identity = 41/84 (48.81%), Postives = 53/84 (63.10%), Query Frame = 3 Query: 90 VVDFTASWCGPCRFIAPFLAELAKKLPNVL-FLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVG-SKKEELQQTIAKHL 335 +VDF A+WCGPC+ IAP L ELA LK+DVDE S A + V ++PT + K+G+ VDKVVG KE L + + KHL Sbjct: 21 LVDFWATWCGPCKMIAPVLEELAGDYDGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGEPVDKVVGFQPKENLAEVLDKHL 104
BLAST of CX298077 vs. ExPASy Swiss-Prot
Match: THIO_STAEQ (Thioredoxin OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=trxA PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.414e-13 Identity = 41/84 (48.81%), Postives = 53/84 (63.10%), Query Frame = 3 Query: 90 VVDFTASWCGPCRFIAPFLAELAKKLPNVL-FLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVG-SKKEELQQTIAKHL 335 +VDF A+WCGPC+ IAP L ELA LK+DVDE S A + V ++PT + K+G+ VDKVVG KE L + + KHL Sbjct: 21 LVDFWATWCGPCKMIAPVLEELAGDYDGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGEPVDKVVGFQPKENLAEVLDKHL 104
BLAST of CX298077 vs. ExPASy Swiss-Prot
Match: THIO1_ANASP (Thioredoxin-1 OS=Anabaena sp. (strain PCC 7120) GN=trxA PE=3 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 2.414e-13 Identity = 38/85 (44.71%), Postives = 55/85 (64.71%), Query Frame = 3 Query: 87 VVVDFTASWCGPCRFIAPFLAELAKKLP-NVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGS-KKEELQQTIAKHL 335 V+VDF A WCGPCR +AP + E+A++ + +KV+ DE VA+ + + ++PT M K G+ VD VVG+ K L QT+ KHL Sbjct: 23 VLVDFWAPWCGPCRMVAPVVDEIAQQYEGKIKVVKVNTDENPQVASQYGIRSIPTLMIFKGGQKVDMVVGAVPKTTLSQTLEKHL 107
BLAST of CX298077 vs. ExPASy Swiss-Prot
Match: THIO1_ANASO (Thioredoxin-1 OS=Anabaena sp. (strain PCC 7119) GN=trxA PE=1 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 2.414e-13 Identity = 38/85 (44.71%), Postives = 55/85 (64.71%), Query Frame = 3 Query: 87 VVVDFTASWCGPCRFIAPFLAELAKKLP-NVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGS-KKEELQQTIAKHL 335 V+VDF A WCGPCR +AP + E+A++ + +KV+ DE VA+ + + ++PT M K G+ VD VVG+ K L QT+ KHL Sbjct: 23 VLVDFWAPWCGPCRMVAPVVDEIAQQYEGKIKVVKVNTDENPQVASQYGIRSIPTLMIFKGGQKVDMVVGAVPKTTLSQTLEKHL 107
BLAST of CX298077 vs. ExPASy Swiss-Prot
Match: THIO_STAHJ (Thioredoxin OS=Staphylococcus haemolyticus (strain JCSC1435) GN=trxA PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.152e-13 Identity = 41/84 (48.81%), Postives = 53/84 (63.10%), Query Frame = 3 Query: 90 VVDFTASWCGPCRFIAPFLAELAKKLPNVL-FLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVG-SKKEELQQTIAKHL 335 +VDF A+WCGPC+ IAP L ELA LK+DVDE S A + V ++PT + K+G+ VDKVVG KE L + + KHL Sbjct: 21 LVDFWATWCGPCKMIAPVLEELAGDYDGKADILKLDVDENPSTAAKFEVMSIPTLIVFKDGEPVDKVVGFQPKENLAEVLDKHL 104
BLAST of CX298077 vs. ExPASy Swiss-Prot
Match: THIO_NEUCR (Thioredoxin OS=Neurospora crassa GN=trx PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.152e-13 Identity = 38/71 (53.52%), Postives = 47/71 (66.20%), Query Frame = 3 Query: 75 TKQLVVVDFTASWCGPCRFIAPFLAELAK--KLPNVL-FLKVDVDELKSVATDWAVEAMPTFMFLKEGKIV 278 T Q VV DF A WCGPC+ IAP A+ AK +PN L F K++VD ++ VA + V AMPTF+F K GK V Sbjct: 20 TTQYVVADFYADWCGPCKAIAPMYAQFAKTFSIPNFLAFAKINVDSVQQVAQHYRVSAMPTFLFFKNGKQV 90 The following BLAST results are available for this feature:
BLAST of CX298077 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 110
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Sequences
The
following sequences are available for this feature:
EST sequence >CX298077 ID=CX298077; Name=CX298077; organism=Citrus clementina; type=EST; length=617bpback to top |