CX298093
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX298093 vs. ExPASy Swiss-Prot
Match: S15A4_MOUSE (Solute carrier family 15 member 4 OS=Mus musculus GN=Slc15a4 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.750e-12 Identity = 44/159 (27.67%), Postives = 80/159 (50.31%), Query Frame = 1 Query: 19 TSLQRVGTGLIFSVIAMIVSAVIEQQRRETSVQKHIQ------------ISAFWLVPQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFLSAISMGMFVSSMLVSIVDKITNKHWLRS-----NLNKGKLNNFYWLLAVLGLLNFMVFLFVAMKH 444 +SL+R+ G+ F + + + ++E +R + +K I + +W +PQY L+G E F + LEF P+ M+S GLF +G FV S L+++V + W+ S N+N L+ +++LLA + ++FL V++K+ Sbjct: 401 SSLKRIAVGMFFVMCSAFAAGILESKRLDLVKEKTINQTIGGVVYHAADLPIWWQIPQYVLIGISEIFASIAGLEFAYSAAPKSMQSAIMGLFFFFSGIGSFVGSGLLALV-SLKAIGWMSSHTDFGNINSCHLHYYFFLLAAIQGATLLLFLIVSVKY 558
BLAST of CX298093 vs. ExPASy Swiss-Prot
Match: S15A4_RAT (Solute carrier family 15 member 4 OS=Rattus norvegicus GN=Slc15a4 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.285e-12 Identity = 44/159 (27.67%), Postives = 79/159 (49.69%), Query Frame = 1 Query: 19 TSLQRVGTGLIFSVIAMIVSAVIEQQRRETSVQKHIQ------------ISAFWLVPQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFLSAISMGMFVSSMLVSIVDKITNKHWLRS-----NLNKGKLNNFYWLLAVLGLLNFMVFLFVAMKH 444 +SL+R+ G+ F + + ++E +R + +K I + +W +PQY L+G E F + LEF P+ M+S GLF +G FV S L+++V + W+ S N+N L+ +++LLA + ++FL V++K+ Sbjct: 399 SSLKRIAVGMFFVTCSAFAAGILESKRLDLVKEKTINQTIGGVVYHAADLPIWWQIPQYVLIGISEIFASIAGLEFAYSAAPKSMQSAIMGLFFFFSGIGSFVGSGLLALV-SLKAIGWMSSHTDFGNINSCHLHYYFFLLAAIQGATLLLFLIVSVKY 556
BLAST of CX298093 vs. ExPASy Swiss-Prot
Match: S15A3_HUMAN (Solute carrier family 15 member 3 OS=Homo sapiens GN=SLC15A3 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.300e-11 Identity = 42/161 (26.09%), Postives = 83/161 (51.55%), Query Frame = 1 Query: 19 TSLQRVGTGLIFSVIAMIVSAVIEQQR------RETSVQKHIQI-------SAFWLVPQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFLSAISMGMFVSSMLVSIVDKITNKHWLR-----SNLNKGKLNNFYWLLAVLGLLNFMVFLFVAMKHQ 447 ++LQ++ G+ F ++IV+ V+E +R ET Q+ ++ S +W +PQY L+G E F + LEF E P M+ G+F +G + S LV+++ WL N+N +++ +++LLA + + ++F+++A +++ Sbjct: 406 SALQKMALGMFFGFTSVIVAGVLEMERLHYIHHNETVSQQIGEVLYNAAPLSIWWQIPQYLLIGISEIFASIPGLEFAYSEAPRSMQGAIMGIFFCLSGVGSLLGSSLVALLS--LPGGWLHCPKDFGNINNCRMDLYFFLLAGIQAVTALLFVWIAGRYE 564
BLAST of CX298093 vs. ExPASy Swiss-Prot
Match: S15A3_MOUSE (Solute carrier family 15 member 3 OS=Mus musculus GN=Slc15a3 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.628e-11 Identity = 40/161 (24.84%), Postives = 80/161 (49.69%), Query Frame = 1 Query: 19 TSLQRVGTGLIFSVIAMIVSAVIEQQRRETSVQKHI-------------QISAFWLVPQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFLSAISMGMFVSSMLVSIVDKITNKHWLR-----SNLNKGKLNNFYWLLAVLGLLNFMVFLFVAMKHQ 447 +SLQ++ G+ F ++IV+ V+E++R + +S +W +PQY L+G E F + LEF E P M+ G+F +G + S LV+++ W+ N+N +++ +++LLA + + ++FL++A +++ Sbjct: 403 SSLQKMALGMFFGFTSIIVAGVLEKERLQYIAANQTVPQLIGKDLYYAAPLSIWWQIPQYLLIGVSEIFASIPGLEFAYSEAPRSMQGAIMGIFFCLSGVGSLLGSGLVALLS--FPGGWMYCPKDFGNINNCQMDRYFFLLAGIEAVTAVLFLWIAGRYE 561 The following BLAST results are available for this feature:
BLAST of CX298093 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >CX298093 ID=CX298093; Name=CX298093; organism=Citrus clementina; type=EST; length=650bpback to top |