CX298097
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX298097 vs. ExPASy Swiss-Prot
Match: STM_BRAOL (Homeobox protein SHOOT MERISTEMLESS OS=Brassica oleracea GN=STM PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.193e-20 Identity = 41/83 (49.40%), Postives = 57/83 (68.67%), Query Frame = 2 Query: 23 QELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNW 271 +ELK +L + + + +++E ++KR+ GKLP + L +WW +H KWPYP+E K L E TGL KQINNWFINQRKR+W Sbjct: 262 RELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSEQQKLALAESTGLDQKQINNWFINQRKRHW 344
BLAST of CX298097 vs. ExPASy Swiss-Prot
Match: STM_ARATH (Homeobox protein SHOOT MERISTEMLESS OS=Arabidopsis thaliana GN=STM PE=1 SV=2) HSP 1 Score: 98.5969 bits (244), Expect = 3.193e-20 Identity = 41/83 (49.40%), Postives = 57/83 (68.67%), Query Frame = 2 Query: 23 QELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNW 271 +ELK +L + + + +++E ++KR+ GKLP + L +WW +H KWPYP+E K L E TGL KQINNWFINQRKR+W Sbjct: 261 RELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSEQQKLALAESTGLDQKQINNWFINQRKRHW 343
BLAST of CX298097 vs. ExPASy Swiss-Prot
Match: KN1_SOLLC (Homeotic protein knotted-1 OS=Solanum lycopersicum GN=KN1 PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.193e-20 Identity = 41/83 (49.40%), Postives = 56/83 (67.47%), Query Frame = 2 Query: 23 QELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNW 271 +ELK L + + + +++E+ +K++ GKLP D L WW+ H KWPYP+E +K L E TGL KQINNWFINQRKR+W Sbjct: 235 RELKNHLLRKYSGYLSSLKQELSKKKKKGKLPKDARQKLITWWELHYKWPYPSESEKVALAESTGLDQKQINNWFINQRKRHW 317
BLAST of CX298097 vs. ExPASy Swiss-Prot
Match: KNOX4_MAIZE (Homeobox protein knotted-1-like 4 (Fragment) OS=Zea mays GN=KNOX4 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.170e-20 Identity = 41/82 (50.00%), Postives = 56/82 (68.29%), Query Frame = 2 Query: 26 ELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNW 271 ELK +L + + + +R+E +K++ GKLP + L +WW+ H KWPYP+E +K L E TGL KQINNWFINQRKR+W Sbjct: 1 ELKYQLLKKYSGYLSSLRQEFSKKKKKGKLPKEARQKLLHWWELHYKWPYPSETEKIALAEATGLDQKQINNWFINQRKRHW 82
BLAST of CX298097 vs. ExPASy Swiss-Prot
Match: LET6_SOLLC (Homeobox protein knotted-1-like LET6 OS=Solanum lycopersicum GN=LET6 PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.447e-20 Identity = 41/83 (49.40%), Postives = 57/83 (68.67%), Query Frame = 2 Query: 23 QELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNW 271 +ELK +L + + + +++E ++KR+ GKLP + L +WW +H KWPYP+E K L E TGL KQINNWFINQRKR+W Sbjct: 236 RELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLVDWWLRHIKWPYPSESQKLALAESTGLDQKQINNWFINQRKRHW 318
BLAST of CX298097 vs. ExPASy Swiss-Prot
Match: KNAP1_MALDO (Homeobox protein knotted-1-like 1 OS=Malus domestica PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.447e-20 Identity = 40/83 (48.19%), Postives = 57/83 (68.67%), Query Frame = 2 Query: 23 QELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNW 271 +ELK L + + + +++E+ +K++ GKLP + L +WW+ H KWPYP+E +K L E TGL KQINNWFINQRKR+W Sbjct: 279 RELKNHLLRKYSGYLSSLKQELSKKKKKGKLPKEARQKLLSWWELHYKWPYPSESEKVALAESTGLDQKQINNWFINQRKRHW 361
BLAST of CX298097 vs. ExPASy Swiss-Prot
Match: KNAT1_ARATH (Homeobox protein knotted-1-like 1 OS=Arabidopsis thaliana GN=KNAT1 PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.114e-20 Identity = 40/83 (48.19%), Postives = 56/83 (67.47%), Query Frame = 2 Query: 23 QELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNW 271 +ELK L + + + +++E+ +K++ GKLP + L WW+ H KWPYP+E +K L E TGL KQINNWFINQRKR+W Sbjct: 278 RELKNHLLKKYSGYLSSLKQELSKKKKKGKLPKEARQKLLTWWELHYKWPYPSESEKVALAESTGLDQKQINNWFINQRKRHW 360
BLAST of CX298097 vs. ExPASy Swiss-Prot
Match: KNX10_MAIZE (Homeobox protein knotted-1-like 10 (Fragment) OS=Zea mays GN=KNOX10 PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 9.291e-20 Identity = 42/82 (51.22%), Postives = 55/82 (67.07%), Query Frame = 2 Query: 26 ELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNW 271 +LK L + + + E+ RK++ GKLP D L +WWQ H +WPYP+E +KA L E TGL+ KQINNWFINQRKR+W Sbjct: 4 DLKNRLLNKYSGYLSSLWRELSRKKKKGKLPRDARQKLLHWWQLHYRWPYPSELEKAALAESTGLEAKQINNWFINQRKRHW 85
BLAST of CX298097 vs. ExPASy Swiss-Prot
Match: KNOS4_ORYSJ (Homeobox protein knotted-1-like 4 OS=Oryza sativa subsp. japonica GN=OSH10 PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 9.291e-20 Identity = 42/83 (50.60%), Postives = 55/83 (66.27%), Query Frame = 2 Query: 23 QELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNW 271 +ELK L + + + E+ +K++ GKLP D L +WWQ H +WPYP+E +KA L E TGL KQINNWFINQRKR+W Sbjct: 199 KELKSHLLNKYSGYLSSLWRELSKKKKKGKLPRDARQKLLHWWQLHYRWPYPSELEKAALAESTGLDAKQINNWFINQRKRHW 281
BLAST of CX298097 vs. ExPASy Swiss-Prot
Match: HSBH1_SOYBN (Homeobox protein SBH1 OS=Glycine max GN=H1 PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 9.291e-20 Identity = 40/83 (48.19%), Postives = 56/83 (67.47%), Query Frame = 2 Query: 23 QELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNW 271 ++LK +L + + + +++E ++KR+ GKLP + L WW +H KWPYP+E K L E TGL KQINNWFINQRKR+W Sbjct: 260 RDLKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLEWWNRHYKWPYPSESQKLALAESTGLDQKQINNWFINQRKRHW 342 The following BLAST results are available for this feature:
BLAST of CX298097 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 53
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Sequences
The
following sequences are available for this feature:
EST sequence >CX298097 ID=CX298097; Name=CX298097; organism=Citrus clementina; type=EST; length=677bpback to top |