CX298097
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX298097 vs. ExPASy Swiss-Prot
Match: KNOX3_MAIZE (Homeobox protein knotted-1-like 3 (Fragment) OS=Zea mays GN=KNOX3 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.703e-19 Identity = 40/83 (48.19%), Postives = 59/83 (71.08%), Query Frame = 2 Query: 23 QELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNW 271 +ELK +L + + + ++R+E+ +KR+ KLP + L +WW+ H +WPYP+E +K L E TGL+ KQINNWFINQRKR+W Sbjct: 3 KELKKQLLRKYSGCLGNLRKELCKKRKKDKLPKEARQKLLSWWELHYRWPYPSEMEKIALAESTGLEQKQINNWFINQRKRHW 85
BLAST of CX298097 vs. ExPASy Swiss-Prot
Match: KNOX8_MAIZE (Homeobox protein knotted-1-like 8 (Fragment) OS=Zea mays GN=KNOX8 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 7.865e-19 Identity = 40/82 (48.78%), Postives = 56/82 (68.29%), Query Frame = 2 Query: 26 ELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNW 271 ELK +L + + + +R+E ++++ GKLP + L +WW+ H KWPYP+E +K L E TGL KQINNWFINQRKR+W Sbjct: 1 ELKHQLLRKYGGYLGGLRQEFSKRKKKGKLPKEARQKLLHWWELHYKWPYPSETEKMALAETTGLDPKQINNWFINQRKRHW 82
BLAST of CX298097 vs. ExPASy Swiss-Prot
Match: KNOS8_ORYSJ (Homeobox protein knotted-1-like 8 OS=Oryza sativa subsp. japonica GN=OSH43 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 6.658e-18 Identity = 38/83 (45.78%), Postives = 56/83 (67.47%), Query Frame = 2 Query: 23 QELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNW 271 ++LK +L + + + D+R+ ++ + GKLP + L +WW+ H KWPYP+E +K L + TGL KQINNWFINQRKR+W Sbjct: 206 KQLKHQLLRKYGGSLGDLRQVFSKRTKKGKLPKEARQKLLHWWELHYKWPYPSEMEKMTLAQTTGLDQKQINNWFINQRKRHW 288
BLAST of CX298097 vs. ExPASy Swiss-Prot
Match: KNOS7_ORYSJ (Homeobox protein knotted-1-like 7 OS=Oryza sativa subsp. japonica GN=OSH3 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.797e-16 Identity = 38/81 (46.91%), Postives = 53/81 (65.43%), Query Frame = 2 Query: 29 LKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNW 271 LK L + + + +R+E+ +KR+ GKLP + L WW+ H +WP P+E +K L E TGL+ KQINN FINQRKR+W Sbjct: 228 LKRHLLRKYSGYLGGLRKELSKKRKKGKLPKEARQKLLTWWELHYRWPNPSEMEKIALAESTGLEQKQINNCFINQRKRHW 308
BLAST of CX298097 vs. ExPASy Swiss-Prot
Match: KNOS9_ORYSJ (Homeobox protein knotted-1-like 9 OS=Oryza sativa subsp. japonica GN=Os03g0772100 PE=2 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 6.232e-16 Identity = 37/84 (44.05%), Postives = 55/84 (65.48%), Query Frame = 2 Query: 23 QELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQH-SKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNW 271 ++LK +L + + D+R+ ++ + GKLP + L +WW+ H KWPYP+E +K L + TGL KQI+NWFINQRKR+W Sbjct: 207 KQLKHQLLMKYGGSLGDLRQAFSKRTKKGKLPKEARLKLLHWWELHYDKWPYPSEVEKMTLAQTTGLDQKQISNWFINQRKRHW 290
BLAST of CX298097 vs. ExPASy Swiss-Prot
Match: KNOS5_ORYSJ (Putative homeobox protein knotted-1-like 5 OS=Oryza sativa subsp. japonica GN=Os03g0673500 PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 6.890e-15 Identity = 33/60 (55.00%), Postives = 39/60 (65.00%), Query Frame = 2 Query: 92 RKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNW 271 +K G LP D L WW H +WPYP+E +KA L E TGL KQ+ NWFINQRKR+W Sbjct: 229 KKNSTGHLPRDARHKLLQWWHLHYRWPYPSEAEKAALAESTGLDKKQVTNWFINQRKRHW 288
BLAST of CX298097 vs. ExPASy Swiss-Prot
Match: HBX9_DICDI (Homeobox protein 9 OS=Dictyostelium discoideum GN=hbx9 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.423e-13 Identity = 30/60 (50.00%), Postives = 42/60 (70.00%), Query Frame = 2 Query: 86 ILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKR 265 I+++++ GKLPG+ TS+LK W +H+ PYPTE++K L T L QINNWF N R+R Sbjct: 557 IVKRKKRGKLPGEATSILKKWLFEHNMHPYPTEEEKVALANSTFLSFNQINNWFTNARRR 616
BLAST of CX298097 vs. ExPASy Swiss-Prot
Match: ME3L2_HUMAN (Putative homeobox protein Meis3-like 2 OS=Homo sapiens GN=MEIS3P2 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.539e-11 Identity = 29/66 (43.94%), Postives = 45/66 (68.18%), Query Frame = 2 Query: 68 EDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKR 265 ED+ +E R ++ G P T++++ W QH PYP+E+ K +LV++TGL + Q+NNWFIN R+R Sbjct: 237 EDLDQEPRRNKKRGIFPKVATNIMRAWLFQHLWHPYPSEEQKKQLVQDTGLTILQVNNWFINARRR 302
BLAST of CX298097 vs. ExPASy Swiss-Prot
Match: PKNX1_MOUSE (Homeobox protein PKNOX1 OS=Mus musculus GN=Pknox1 PE=2 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 4.622e-11 Identity = 36/98 (36.73%), Postives = 55/98 (56.12%), Query Frame = 2 Query: 26 ELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKSKRKR 319 +L+++L Q + + E+ K + G LP T+V+++W QH PYPTED+K ++ +T L L Q+NNWFIN R+R S S K K+ Sbjct: 240 QLQLQLNQDLSTLHQ---EDGSSKNKRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTLLQVNNWFINARRRILQPMLDSSCSETPKTKK 334
BLAST of CX298097 vs. ExPASy Swiss-Prot
Match: MEIS3_HUMAN (Homeobox protein Meis3 OS=Homo sapiens GN=MEIS3 PE=1 SV=3) HSP 1 Score: 68.1662 bits (165), Expect = 4.622e-11 Identity = 28/66 (42.42%), Postives = 44/66 (66.67%), Query Frame = 2 Query: 68 EDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKR 265 ED+ +E R ++ G P T++++ W QH PYP+E+ K +L ++TGL + Q+NNWFIN R+R Sbjct: 254 EDLDQERRRNKKRGIFPKVATNIMRAWLFQHLSHPYPSEEQKKQLAQDTGLTILQVNNWFINARRR 319 The following BLAST results are available for this feature:
BLAST of CX298097 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 53
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Sequences
The
following sequences are available for this feature:
EST sequence >CX298097 ID=CX298097; Name=CX298097; organism=Citrus clementina; type=EST; length=677bpback to top |