CX298105

Overview
NameCX298105
Unique NameCX298105
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length646
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX298105 vs. ExPASy Swiss-Prot
Match: C77A3_SOYBN (Cytochrome P450 77A3 OS=Glycine max GN=CYP77A3 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 7.280e-11
Identity = 35/103 (33.98%), Postives = 51/103 (49.51%), Query Frame = 2 
Query:    5 PPGPMLLPRQTISHCKINGYDVNPETLLQVNVWAIGRDSRYWSKAEEFFPERFIDNS--VDFKG-QNFELLPFGGGRRICPGIQMGISTVELALANLLYHFNW 304
            PP   +L         + GYD+  +  ++V   AI  D + W   E+F PERFI      D  G    +++PFG GRRICPG+ M    + L +A ++  F W
Sbjct:  372 PPTHFVLTHAVTEPTTLGGYDIPIDANVEVYTPAIAEDPKNWLNPEKFDPERFISGGEEADITGVTGVKMMPFGVGRRICPGLAMATVHIHLMMARMVQEFEW 474
The following BLAST results are available for this feature:
BLAST of CX298105 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
C77A3_SOYBN7.280e-1133.98Cytochrome P450 77A3 OS=Glycine max GN=CYP77A3 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC06008F06SK RindPdig24 Citrus clementina cDNA clone C06008F06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX298105 ID=CX298105; Name=CX298105; organism=Citrus clementina; type=EST; length=646bp
AGGCCCTCCTGGCCCGATGCTACTCCCAAGACAAACTATTTCGCACTGTA
AAATAAACGGTTATGACGTTAACCCTGAAACATTGTTGCAAGTTAACGTT
TGGGCAATTGGAAGAGATTCGAGGTATTGGAGCAAAGCTGAAGAATTCTT
TCCAGAAAGATTCATTGATAACTCGGTTGATTTTAAAGGGCAAAACTTTG
AATTATTGCCATTTGGAGGTGGTCGTAGAATTTGTCCTGGGATTCAAATG
GGTATATCAACAGTGGAGCTTGCACTTGCAAATCTCTTGTATCATTTCAA
CTGGAAATTGCCCAACGGAATGGAAGGAGGAGATTTGAACATGGAGGAAG
CCATTGGTCAGAGTCTTACGACCTCTAAAAAGACACCTCTCATGCTAGTT
CCCATCAATTACAGCCATACGAAGTAGCGTGAGCAGAGGATGCCGCTAGA
AAACACAAAATTAGGGGATATCAACGGGACATAATCCCTTTTCAAATTAA
GCTCAAAATAAAACGACCGGCATCTTTTGCATTGTTTAAATAAAATTTAC
AGTTTTTTTGTACTTTTACAATTTTGTATTCCTGTATAAGTATTGCATTT
TATCGATTTTATTTACAGTCAAAAAAAAAAAAAAAAAAAAAAAAAA
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