CX298105

Overview
NameCX298105
Unique NameCX298105
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length646
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX298105 vs. ExPASy Swiss-Prot
Match: C76A1_SOLME (Cytochrome P450 76A1 (Fragment) OS=Solanum melongena GN=CYP76A1 PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 1.969e-32
Identity = 62/133 (46.62%), Postives = 88/133 (66.17%), Query Frame = 2
Query:    5 PPGPMLLPRQTISHCKINGYDVNPETLLQVNVWAIGRDSRYWSKAEEFFPERFIDNSVDFKGQNFELLPFGGGRRICPGIQMGISTVELALANLLYHFNWKLPNGMEGGDLNMEEAIGQSLTTSKKTPLMLVP 403
            PP P+L+PR+ I   K  GYD+   T + VN WAIGRD  YW    EF PERF+++ VD KGQN+EL+PFG GRR+C G+ +G   +     +LL+ F+W+LP+ +    +NMEE++G  +T  KK PL ++P
Sbjct:  334 PPLPLLIPRKAIQDTKFMGYDIPKGTQVLVNAWAIGRDPEYWDNPFEFKPERFLESKVDVKGQNYELIPFGAGRRMCVGLPLGHRMMHFTFGSLLHEFDWELPHNVSPKSINMEESMG--ITARKKQPLKVIP 464          
BLAST of CX298105 vs. ExPASy Swiss-Prot
Match: C76C4_ARATH (Cytochrome P450 76C4 OS=Arabidopsis thaliana GN=CYP76C4 PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 2.571e-32
Identity = 63/134 (47.01%), Postives = 89/134 (66.42%), Query Frame = 2
Query:    5 PPGPMLLPRQTISHCKINGYDVNPETLLQVNVWAIGRDSRYWSKAEEFFPERFIDNSVDFKGQNFELLPFGGGRRICPGIQMGISTVELALANLLYHFNWKLPNGMEGGDLNMEEAIGQSLTTSKKTPLMLVPI 406
            P  P+L+PR+  S  ++ G+ V  +T + VNVWAIGRD   W    +F PERF+   +D KG+++EL PFGGGRRICPG+ + + TV L LA+LLY F+WKLPNG+   DL+M+E  G  +T  +   L  +P+
Sbjct:  374 PAAPLLVPRKAESDVEVLGFMVPKDTQVLVNVWAIGRDPSVWENPSQFEPERFMGKDIDVKGRDYELTPFGGGRRICPGLPLAVKTVSLMLASLLYSFDWKLPNGVVSEDLDMDETFG--ITLHRTNTLYAIPV 505          
BLAST of CX298105 vs. ExPASy Swiss-Prot
Match: C83B1_ARATH (Cytochrome P450 83B1 OS=Arabidopsis thaliana GN=CYP83B1 PE=1 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 4.386e-32
Identity = 68/139 (48.92%), Postives = 92/139 (66.19%), Query Frame = 2
Query:    5 PPGPMLLPRQTISHCKINGYDVNPETLLQVNVWAIGRDSRYWS-KAEEFFPERFIDN--SVDFKGQNFELLPFGGGRRICPGIQMGISTVELALANLLYHFNWKLPNGMEGGDLNMEEAIGQSLTTSKKTPLMLVPINY 412
            P  P+LL R+TI+  KI GYD+  +T++QVN WA+ RD+  W     EF PERF++    VDFKGQ+FELLPFG GRR+CP + +GI+ VE+  ANLLY F+W LP G++  D+ M+   G  L   KK  L+L P  +
Sbjct:  362 PVIPILLHRETIADAKIGGYDIPAKTIIQVNAWAVSRDTAAWGDNPNEFIPERFMNEHKGVDFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKFDWSLPKGIKPEDIKMDVMTG--LAMHKKEHLVLAPTKH 498          
BLAST of CX298105 vs. ExPASy Swiss-Prot
Match: C71C3_MAIZE (Cytochrome P450 71C3 OS=Zea mays GN=CYP71C3 PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.276e-31
Identity = 67/139 (48.20%), Postives = 89/139 (64.03%), Query Frame = 2
Query:    5 PPGPMLLPRQTISHCKINGYDVNPETLLQVNVWAIGRDSRYWSKAEEFFPERFI----DNSVDFKGQNFELLPFGGGRRICPGIQMGISTVELALANLLYHFNWKLPNGMEGG--DLNMEEAIGQSLTTSKKTPLMLVP 403
            PPGP+LLP  + + C+I+GY +     + VN WAIGRD   W K EEF PERF+    D S  + GQ+F  LPFG GRRICPG   G++T+E+ LANL+YHF+W++PN  E G   ++M+E  G  L   +   L LVP
Sbjct:  395 PPGPLLLPHYSTADCQIDGYHIPANPRVLVNGWAIGRDPAVWEKPEEFMPERFMRDGWDKSNSYSGQDFRYLPFGSGRRICPGANFGLATMEIMLANLMYHFDWEVPNEKEDGCWKVSMDEKFG--LMLRRNELLYLVP 531          
BLAST of CX298105 vs. ExPASy Swiss-Prot
Match: C76C1_ARATH (Cytochrome P450 76C1 OS=Arabidopsis thaliana GN=CYP76C1 PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.667e-31
Identity = 65/133 (48.87%), Postives = 88/133 (66.17%), Query Frame = 2
Query:    8 PGPMLLPRQTISHCKINGYDVNPETLLQVNVWAIGRDSRYWSKAEEFFPERFIDNSVDFKGQNFELLPFGGGRRICPGIQMGISTVELALANLLYHFNWKLPNGMEGGDLNMEEAIGQSLTTSKKTPLMLVPI 406
            P P+L+PR+  S  +I G+ V  +T + VNVWAIGRD   W    +F PERF+   +D +G+++EL PFG GRRICPG+ + + TV L LA+LLY F+WKLP G+   DL+M+E  G  LT  K  PL  VP+
Sbjct:  375 PVPLLIPRKAESDAEILGFMVLKDTQVLVNVWAIGRDPSVWDNPSQFEPERFLGKDMDVRGRDYELTPFGAGRRICPGMPLAMKTVSLMLASLLYSFDWKLPKGVLSEDLDMDETFG--LTLHKTNPLHAVPV 505          
BLAST of CX298105 vs. ExPASy Swiss-Prot
Match: C98A1_SORBI (Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 2.843e-31
Identity = 64/149 (42.95%), Postives = 91/149 (61.07%), Query Frame = 2
Query:    5 PPGPMLLPRQTISHCKINGYDVNPETLLQVNVWAIGRDSRYWSKAEEFFPERFIDNSVDFKGQNFELLPFGGGRRICPGIQMGISTVELALANLLYHFNWKLPNGMEGGDLNMEEAIGQSLTTSKKTPLMLVPINYSHTK*REQRMPLE 451
            PP P++LP +  ++ KI GYD+     + VNVWA+ RD + WS   E+ PERF++ ++D KG +F +LPFG GRR+CPG Q+GI+ V   + +LL+HF W LP G    D+NM E+ G  L T   TPL  V       +    R+P+E
Sbjct:  365 PPTPLMLPHKASTNVKIGGYDIPKGANVMVNVWAVARDPKVWSNPLEYRPERFLEENIDIKGSDFRVLPFGAGRRVCPGAQLGINLVASMIGHLLHHFEWSLPEGTRPEDVNMMESPG--LVTFMGTPLQAVAKPRLEKEELYNRVPVE 511          
BLAST of CX298105 vs. ExPASy Swiss-Prot
Match: C71A9_SOYBN (Cytochrome P450 71A9 OS=Glycine max GN=CYP71A9 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 2.843e-31
Identity = 65/131 (49.62%), Postives = 88/131 (67.18%), Query Frame = 2
Query:    5 PPGPMLLPRQTISHCKINGYDVNPETLLQVNVWAIGRDSRYWSKAEEFFPERFIDNSVDFKGQNFELLPFGGGRRICPGIQMGISTVELALANLLYHFNWKLPNGMEGGDLNMEEAIGQSLTTSKKTPLML 397
            PP P+L+PR+   +C I G+++  +T + VN  +I  D   W    EF PERF+ + +DFKGQ+FE+LPFG GRR CPG+   +  VELALANLL+ F+W+LP G+   DL+MEEAIG  +T  KK  L L
Sbjct:  364 PPAPLLVPREITENCTIKGFEIPAKTRVLVNAKSIAMDPCCWENPNEFLPERFLVSPIDFKGQHFEMLPFGVGRRGCPGVNFAMPVVELALANLLFRFDWELPLGLGIQDLDMEEAIG--ITIHKKAHLWL 492          
BLAST of CX298105 vs. ExPASy Swiss-Prot
Match: C7D94_MENGR (Cytochrome P450 71D94 OS=Mentha gracilis GN=CYP71D94 PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 6.334e-31
Identity = 64/133 (48.12%), Postives = 86/133 (64.66%), Query Frame = 2
Query:    5 PPGPMLLPRQTISHCKINGYDVNPETLLQVNVWAIGRDSRYWSKAEEFFPERFIDNSVDFKGQNFELLPFGGGRRICPGIQMGISTVELALANLLYHFNWKLPNGMEGGDLNMEEAIGQSLTTSKKTPLMLVP 403
            PP P L+PRQ+   C+ING+ +   T + +N W+IGRD  YW   + F PERF + S DF G +FE +PFG G+RICPG+  G++ VE+ LA LLYHF+WKLP GM   DL +    G  L+  +K  + LVP
Sbjct:  359 PPFP-LIPRQSREECEINGFYIPARTRILINAWSIGRDPLYWEDPDTFRPERFDEVSRDFMGNDFEFIPFGAGQRICPGLHFGLANVEIPLAQLLYHFDWKLPQGMTDADLYVAGTPG--LSGPRKKNVFLVP 488          
BLAST of CX298105 vs. ExPASy Swiss-Prot
Match: C99A3_ORYSJ (Cytochrome P450 99A3 OS=Oryza sativa subsp. japonica GN=CYP99A3 PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.080e-30
Identity = 64/136 (47.06%), Postives = 85/136 (62.50%), Query Frame = 2
Query:    5 PPGPMLLPRQTISHCKINGYDVNPETLLQVNVWAIGRDSRYWSKAEEFFPERFIDNSVDFKGQNFELLPFGGGRRICPGIQMGISTVELALANLLYHFNWKLPNGMEGGDLNMEEAIGQSLTTSKKTPLMLVPINY 412
            P  P+LLP      C+I GY++   T + +N WA+ R   YW  AE+F PERF D + DFKG  FE LPFG GRR CPG    ++T+EL +A LLY+F+W LP+GM+ GD++ME  +G   T  +K  L LV   Y
Sbjct:  362 PVLPLLLPHLCRETCEIGGYEIVEGTRVLINSWAMARSPEYWDDAEKFIPERFEDGTADFKGSRFEYLPFGTGRRRCPGDIFAMATLELIVARLLYYFDWSLPDGMQPGDIDMELVVG--ATARRKNHLQLVASPY 495          
BLAST of CX298105 vs. ExPASy Swiss-Prot
Match: C71C4_MAIZE (Cytochrome P450 71C4 OS=Zea mays GN=CYP71C4 PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.080e-30
Identity = 61/137 (44.53%), Postives = 86/137 (62.77%), Query Frame = 2
Query:    5 PPGPMLLPRQTISHCKINGYDVNPETLLQVNVWAIGRDSRYWSKAEEFFPERFIDNSV----DFKGQNFELLPFGGGRRICPGIQMGISTVELALANLLYHFNWKLPNGMEGGDLNMEEAIGQSLTTSKKTPLMLVP 403
            PP P+LLP  ++  C++ GY +   T + VN WA+GR S YW +  EF PERF+   V    D K   F+ L FG GRR+CPG+    +T+E  L+NL+Y F+W+LP GM+  D++M E  G  +T S+K  L+LVP
Sbjct:  401 PPVPLLLPHYSLDACEVAGYTIPANTRVVVNAWALGRHSGYWERENEFVPERFLSGDVAGGVDLKPNEFQFLAFGSGRRMCPGVHSASATIEAMLSNLMYRFDWQLPAGMKAEDVDMTEVFG--ITVSRKEKLLLVP 535          
The following BLAST results are available for this feature:
BLAST of CX298105 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
C76A1_SOLME1.969e-3246.62Cytochrome P450 76A1 (Fragment) OS=Solanum melonge... [more]
C76C4_ARATH2.571e-3247.01Cytochrome P450 76C4 OS=Arabidopsis thaliana GN=CY... [more]
C83B1_ARATH4.386e-3248.92Cytochrome P450 83B1 OS=Arabidopsis thaliana GN=CY... [more]
C71C3_MAIZE1.276e-3148.20Cytochrome P450 71C3 OS=Zea mays GN=CYP71C3 PE=2 S... [more]
C76C1_ARATH1.667e-3148.87Cytochrome P450 76C1 OS=Arabidopsis thaliana GN=CY... [more]
C98A1_SORBI2.843e-3142.95Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1... [more]
C71A9_SOYBN2.843e-3149.62Cytochrome P450 71A9 OS=Glycine max GN=CYP71A9 PE=... [more]
C7D94_MENGR6.334e-3148.12Cytochrome P450 71D94 OS=Mentha gracilis GN=CYP71D... [more]
C99A3_ORYSJ1.080e-3047.06Cytochrome P450 99A3 OS=Oryza sativa subsp. japoni... [more]
C71C4_MAIZE1.080e-3044.53Cytochrome P450 71C4 OS=Zea mays GN=CYP71C4 PE=2 S... [more]

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Properties
Property NameValue
Genbank descriptionC06008F06SK RindPdig24 Citrus clementina cDNA clone C06008F06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX298105 ID=CX298105; Name=CX298105; organism=Citrus clementina; type=EST; length=646bp
AGGCCCTCCTGGCCCGATGCTACTCCCAAGACAAACTATTTCGCACTGTA
AAATAAACGGTTATGACGTTAACCCTGAAACATTGTTGCAAGTTAACGTT
TGGGCAATTGGAAGAGATTCGAGGTATTGGAGCAAAGCTGAAGAATTCTT
TCCAGAAAGATTCATTGATAACTCGGTTGATTTTAAAGGGCAAAACTTTG
AATTATTGCCATTTGGAGGTGGTCGTAGAATTTGTCCTGGGATTCAAATG
GGTATATCAACAGTGGAGCTTGCACTTGCAAATCTCTTGTATCATTTCAA
CTGGAAATTGCCCAACGGAATGGAAGGAGGAGATTTGAACATGGAGGAAG
CCATTGGTCAGAGTCTTACGACCTCTAAAAAGACACCTCTCATGCTAGTT
CCCATCAATTACAGCCATACGAAGTAGCGTGAGCAGAGGATGCCGCTAGA
AAACACAAAATTAGGGGATATCAACGGGACATAATCCCTTTTCAAATTAA
GCTCAAAATAAAACGACCGGCATCTTTTGCATTGTTTAAATAAAATTTAC
AGTTTTTTTGTACTTTTACAATTTTGTATTCCTGTATAAGTATTGCATTT
TATCGATTTTATTTACAGTCAAAAAAAAAAAAAAAAAAAAAAAAAA
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