CX298117
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX298117 vs. ExPASy Swiss-Prot
Match: PGLRB_ASPFL (Polygalacturonase B OS=Aspergillus flavus GN=pecB PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.102e-21 Identity = 45/83 (54.22%), Postives = 55/83 (66.27%), Query Frame = 2 Query: 371 VAKYGIVIEQDYENGSPTGKPTNGVPISELTIENVTGTLKSSATEVYILCGNGSCKNWKWAXXXXXXXXXXXXXXNVPAGASC 619 + K GIVIE DY+NG PTGKPT GVPI++LT+ VTG++ S AT VYILCG GSC +W W N+P+GASC Sbjct: 284 IKKNGIVIELDYKNGGPTGKPTTGVPITDLTVNGVTGSVASKATPVYILCGKGSCSDWTWKGVSISGGKKSDKCQNIPSGASC 366
BLAST of CX298117 vs. ExPASy Swiss-Prot
Match: PGLR1_COLLN (Endopolygalacturonase 1 OS=Colletotrichum lindemuthianum GN=PG1 PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.307e-20 Identity = 46/81 (56.79%), Postives = 57/81 (70.37%), Query Frame = 2 Query: 371 VAKYGIVIEQDYENGSPTGKPTNGVPISELTIENVTGTLKSSATEVYILCGNGSCKNWKWAXXXXXXXXXXXXXXNVPAGA 613 +AKYGIVIEQDYENGSPTGKPT+GVPIS LT+ ++G++ SSAT VYILC SC NWKW+ +P+G+ Sbjct: 281 IAKYGIVIEQDYENGSPTGKPTSGVPISGLTLSKISGSVSSSATPVYILC--ASCTNWKWSGVSVTGGKKSSKCTGIPSGS 359
BLAST of CX298117 vs. ExPASy Swiss-Prot
Match: PGLR2_ASPTU (Polygalacturonase-2 OS=Aspergillus tubingensis GN=pgaII PE=1 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.319e-20 Identity = 41/83 (49.40%), Postives = 58/83 (69.88%), Query Frame = 2 Query: 371 VAKYGIVIEQDYENGSPTGKPTNGVPISELTIENVTGTLKSSATEVYILCGNGSCKNWKWAXXXXXXXXXXXXXXNVPAGASC 619 ++ YG+VI+QDYE+G PTGKPTNGV I+++ +E+VTGT+ S AT++Y+LCG+GSC +W W N P+ ASC Sbjct: 280 ISDYGVVIQQDYEDGKPTGKPTNGVTITDVKLESVTGTVDSKATDIYLLCGSGSCSDWTWDDVKVTGGKKSTACKNYPSVASC 362
BLAST of CX298117 vs. ExPASy Swiss-Prot
Match: PGLR2_ASPNG (Endopolygalacturonase-2 OS=Aspergillus niger GN=pgaB PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.368e-20 Identity = 41/83 (49.40%), Postives = 57/83 (68.67%), Query Frame = 2 Query: 371 VAKYGIVIEQDYENGSPTGKPTNGVPISELTIENVTGTLKSSATEVYILCGNGSCKNWKWAXXXXXXXXXXXXXXNVPAGASC 619 ++ YG+VI+QDYE+G PTGKPTNGV I ++ +E+VTG++ S ATE+Y+LCG+GSC +W W N P+ ASC Sbjct: 280 ISDYGVVIQQDYEDGKPTGKPTNGVTIQDVKLESVTGSVDSGATEIYLLCGSGSCSDWTWDDVKVTGGKKSTACKNFPSVASC 362
BLAST of CX298117 vs. ExPASy Swiss-Prot
Match: PGLR1_SCLSC (Endo-polygalacturonase OS=Sclerotinia sclerotiorum GN=PG1 PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.838e-17 Identity = 38/60 (63.33%), Postives = 46/60 (76.67%), Query Frame = 2 Query: 371 VAKYGIVIEQDYENGSPTGKPTNGVPISELTIENVTGTLKSSATEVYILCGNGSCKNWKW 550 + YG+VIEQDYENGSPTGKPT+GVPI+ +T+ NV GT+ SSAT VY+LC C W W Sbjct: 301 ITSYGVVIEQDYENGSPTGKPTSGVPITGVTLSNVHGTVSSSATNVYVLC--AKCSGWTW 358
BLAST of CX298117 vs. ExPASy Swiss-Prot
Match: PGLR1_ASPAC (Polygalacturonase 1 OS=Aspergillus aculeatus GN=pga1 PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.136e-15 Identity = 37/83 (44.58%), Postives = 52/83 (62.65%), Query Frame = 2 Query: 371 VAKYGIVIEQDYENGSPTGKPTNGVPISELTIENVTGTLKSSATEVYILCGNGSCKNWKWAXXXXXXXXXXXXXXNVPAGASC 619 +AKYGIV++Q+Y + S T PT GVPI++ ++NV G++ SS T + I CG+GSC +W W NVP+GASC Sbjct: 298 IAKYGIVVQQNYGDTSST--PTTGVPITDFVLDNVHGSVVSSGTNILISCGSGSCSDWTWTDVSVSGGKTSSKCTNVPSGASC 378
BLAST of CX298117 vs. ExPASy Swiss-Prot
Match: PGLR3_ASPNG (Polygalacturonase-3 OS=Aspergillus niger GN=pgaC PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.217e-14 Identity = 41/91 (45.05%), Postives = 53/91 (58.24%), Query Frame = 2 Query: 365 HEVA-----KYGIVIEQDYENGSPTGKPTNGVPISELTIENVTGTLKSS-ATEVYILCGNGSCKNWKWAXXXXXXXXXXXXXXNVPAGASC 619 HE+A YGIVIEQ+Y++ S T PT GVPI++ +EN+ GT + TEVYI CG+GSC +W W NVP+G SC Sbjct: 293 HEIAFSDATDYGIVIEQNYDDTSKT--PTTGVPITDFVLENIVGTCEDDDCTEVYIACGDGSCSDWTWTGVSVTGGSVSDDCLNVPSGISC 381
BLAST of CX298117 vs. ExPASy Swiss-Prot
Match: PGLR_GIBFU (Polygalacturonase OS=Gibberella fujikuroi GN=PGA PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.114e-13 Identity = 32/61 (52.46%), Postives = 45/61 (73.77%), Query Frame = 2 Query: 371 VAKYGIVIEQDYENGSPTGKPTNGVPISELTIENVTGTLKSSATEVYILCGNGSCKNWKWA 553 ++ YG+ ++QDY NG PTGKPTNGV IS + VTGT+ SSA + +ILCG+GSC + ++ Sbjct: 291 ISTYGVDVQQDYLNGGPTGKPTNGVKISNIKFIKVTGTVASSAQDWFILCGDGSCSGFTFS 351
BLAST of CX298117 vs. ExPASy Swiss-Prot
Match: PGLR_PHACE (Polygalacturonase OS=Phaedon cochleariae PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.488e-12 Identity = 34/82 (41.46%), Postives = 45/82 (54.88%), Query Frame = 2 Query: 377 KYGIVIEQDYENGSPTGKPTNGVPISELTIENVTGTLK-SSATEVYILCGNGSCKNWKWAXXXXXXXXXXXXXXNVPAGASC 619 KY + +EQDY+ G PTG P +PI L +E VTGTL +T VYI+C +G+C N+ W+ VP G SC Sbjct: 286 KYAVNVEQDYKKGKPTGIPVGNIPIKGLHLEKVTGTLTGEESTPVYIICADGACSNFNWSGVSFEGASHASNCSYVPTGYSC 367
BLAST of CX298117 vs. ExPASy Swiss-Prot
Match: PGLR4_ASPNG (Polygalacturonase-4 OS=Aspergillus niger GN=pgaE PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.538e-12 Identity = 31/84 (36.90%), Postives = 50/84 (59.52%), Query Frame = 2 Query: 368 EVAKYGIVIEQDYENGSPTGKPTNGVPISELTIENVTGTLKSSATEVYILCGNGSCKNWKWAXXXXXXXXXXXXXXNVPAGASC 619 ++ YGIV+EQ+Y++ S + PT+G+ I + ++NV G+++SS T +YI+CG+ SC +W W NVP SC Sbjct: 297 DITDYGIVVEQNYDDTSES--PTDGITIEDFVLDNVQGSVESSGTNIYIVCGSDSCTDWTWTDVDVTGGKTSSDCENVPDDISC 378 The following BLAST results are available for this feature:
BLAST of CX298117 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
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Sequences
The
following sequences are available for this feature:
EST sequence >CX298117 ID=CX298117; Name=CX298117; organism=Citrus clementina; type=EST; length=689bpback to top |