CX298118
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX298118 vs. ExPASy Swiss-Prot
Match: NEDD8_CAEEL (NEDD8 OS=Caenorhabditis elegans GN=ned-8 PE=1 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 3.479e-17 Identity = 41/70 (58.57%), Postives = 53/70 (75.71%), Query Frame = 1 Query: 130 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 339 M I VKTLTGK I L++E +D ++ +K K+++KEGIPP QQRLIFAGKQ+ D +T ADY + S LHLV Sbjct: 1 MLIKVKTLTGKEIELDIEPNDRVERIKEKVEEKEGIPPPQQRLIFAGKQMNDDKTAADYKVLGGSVLHLV 70
BLAST of CX298118 vs. ExPASy Swiss-Prot
Match: RUB2_ARATH (NEDD8-like protein RUB2 OS=Arabidopsis thaliana GN=RUB2 PE=2 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 7.751e-17 Identity = 41/68 (60.29%), Postives = 53/68 (77.94%), Query Frame = 1 Query: 136 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 339 I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T DY I+ S LHLV Sbjct: 3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYAIEGGSVLHLV 70
BLAST of CX298118 vs. ExPASy Swiss-Prot
Match: NEDD8_RAT (NEDD8 OS=Rattus norvegicus GN=Nedd8 PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 5.024e-16 Identity = 38/70 (54.29%), Postives = 53/70 (75.71%), Query Frame = 1 Query: 130 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 339 M I VKTLTGK I +++E +D ++ +K ++++KEGIPP QQRLI++GKQ+ D +T ADY I S LHLV Sbjct: 1 MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLV 70
BLAST of CX298118 vs. ExPASy Swiss-Prot
Match: NEDD8_RABIT (NEDD8 OS=Oryctolagus cuniculus GN=NEDD8 PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 5.024e-16 Identity = 38/70 (54.29%), Postives = 53/70 (75.71%), Query Frame = 1 Query: 130 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 339 M I VKTLTGK I +++E +D ++ +K ++++KEGIPP QQRLI++GKQ+ D +T ADY I S LHLV Sbjct: 1 MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLV 70
BLAST of CX298118 vs. ExPASy Swiss-Prot
Match: NEDD8_MOUSE (NEDD8 OS=Mus musculus GN=Nedd8 PE=1 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 5.024e-16 Identity = 38/70 (54.29%), Postives = 53/70 (75.71%), Query Frame = 1 Query: 130 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 339 M I VKTLTGK I +++E +D ++ +K ++++KEGIPP QQRLI++GKQ+ D +T ADY I S LHLV Sbjct: 1 MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLV 70
BLAST of CX298118 vs. ExPASy Swiss-Prot
Match: NEDD8_HUMAN (NEDD8 OS=Homo sapiens GN=NEDD8 PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 5.024e-16 Identity = 38/70 (54.29%), Postives = 53/70 (75.71%), Query Frame = 1 Query: 130 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 339 M I VKTLTGK I +++E +D ++ +K ++++KEGIPP QQRLI++GKQ+ D +T ADY I S LHLV Sbjct: 1 MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLV 70
BLAST of CX298118 vs. ExPASy Swiss-Prot
Match: NEDD8_BOVIN (NEDD8 OS=Bos taurus GN=NEDD8 PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 5.024e-16 Identity = 38/70 (54.29%), Postives = 53/70 (75.71%), Query Frame = 1 Query: 130 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 339 M I VKTLTGK I +++E +D ++ +K ++++KEGIPP QQRLI++GKQ+ D +T ADY I S LHLV Sbjct: 1 MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLV 70
BLAST of CX298118 vs. ExPASy Swiss-Prot
Match: RUB3_ORYSJ (NEDD8-like protein RUB3 OS=Oryza sativa subsp. japonica GN=RUB3 PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 6.562e-16 Identity = 36/70 (51.43%), Postives = 53/70 (75.71%), Query Frame = 1 Query: 130 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 339 + + V+TLTGK I +++E +DT+D +K +++++EGIPP QQRLI+ GKQL D +T DY I+ S LHLV Sbjct: 1 LNVKVRTLTGKEIDIDIEMTDTVDRIKERVEEREGIPPVQQRLIYGGKQLADDKTAHDYKIEAGSVLHLV 70
BLAST of CX298118 vs. ExPASy Swiss-Prot
Match: RUB3_ARATH (NEDD8-like protein RUB3 OS=Arabidopsis thaliana GN=RUB3 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 4.253e-15 Identity = 37/70 (52.86%), Postives = 52/70 (74.29%), Query Frame = 1 Query: 130 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 339 M+I VKTLT K I +E+E +DTI+ +K +I++KEGIPP QR+++ GKQL D T YN+++ S LHLV Sbjct: 1 MEIKVKTLTEKQIDIEIELTDTIERIKERIEEKEGIPPVHQRIVYTGKQLADDLTAKHYNLERGSVLHLV 70
BLAST of CX298118 vs. ExPASy Swiss-Prot
Match: NEDD8_DICDI (NEDD8 OS=Dictyostelium discoideum GN=nedd8 PE=3 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 9.475e-15 Identity = 36/70 (51.43%), Postives = 52/70 (74.29%), Query Frame = 1 Query: 130 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 339 M I VKTLTGK I ++++ +D I +K ++++KEGIPP QQRLIF GKQ+ D + ++Y+I+ S LHLV Sbjct: 1 MLIKVKTLTGKEIEIDIDPTDKIQRIKERVEEKEGIPPSQQRLIFGGKQMGDDKPASEYSIEGGSVLHLV 70 The following BLAST results are available for this feature:
BLAST of CX298118 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 93
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Sequences
The
following sequences are available for this feature:
EST sequence >CX298118 ID=CX298118; Name=CX298118; organism=Citrus clementina; type=EST; length=533bpback to top |