CX298120

Overview
NameCX298120
Unique NameCX298120
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length607
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX298120 vs. ExPASy Swiss-Prot
Match: HSP70_XENLA (Heat shock 70 kDa protein OS=Xenopus laevis PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.215e-17
Identity = 37/83 (44.58%), Postives = 60/83 (72.29%), Query Frame = 2
Query:    2 EEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 250
            +  +++V+AKNALE+YA+N+++ V+DE +  K+   DK+ I +   Q I WL++NQLAE +E+  + K+LE +C PII K+YQ
Sbjct:  531 DAQRERVDAKNALESYAFNLKSMVEDENVKGKISDEDKRTISEKCTQVISWLENNQLAEKEEYAFQQKDLEKVCQPIITKLYQ 613          
BLAST of CX298120 vs. ExPASy Swiss-Prot
Match: HSP70_AJECA (Heat shock 70 kDa protein OS=Ajellomyces capsulata GN=HSP70 PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.073e-17
Identity = 36/82 (43.90%), Postives = 57/82 (69.51%), Query Frame = 2
Query:    2 EEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 247
            E    ++  KN LE+YAY++RN+++  K+  KL+  DK+K++  ID+ +QWLD NQ A  +E+E + KELE++ NPI+ K Y
Sbjct:  529 EAEASRIRPKNGLESYAYSLRNSLRHSKVDEKLEAGDKEKLKSEIDKTVQWLDENQTATKEEYESQQKELEAVANPIMMKFY 610          
BLAST of CX298120 vs. ExPASy Swiss-Prot
Match: HSP70_PENCI (Heat shock 70 kDa protein (Fragment) OS=Penicillium citrinum GN=HSP70 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 6.031e-17
Identity = 40/82 (48.78%), Postives = 58/82 (70.73%), Query Frame = 2
Query:    2 EEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 247
            E    +++AKN LE+YAY+++NT+ + K+  ++   DKKKIED I + I WLD+NQ AE DE+E + KELE+I NPI+   Y
Sbjct:  398 EAEASRIQAKNGLESYAYSLKNTITEGKL--QMSDDDKKKIEDKISEIISWLDNNQTAEKDEYESQQKELEAIANPIMQAAY 477          
BLAST of CX298120 vs. ExPASy Swiss-Prot
Match: HSP70_EMENI (Heat shock 70 kDa protein OS=Emericella nidulans GN=hsp70 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 6.031e-17
Identity = 38/82 (46.34%), Postives = 58/82 (70.73%), Query Frame = 2
Query:    2 EEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 247
            E    +++AKN LE+YAY+++NT+ + ++  ++   DKKK+ D ID+ I WLD+NQ AE DE+E + KELE + NPII+  Y
Sbjct:  528 EAEAARIQAKNGLESYAYSLKNTISEGQL--QISEDDKKKVSDKIDEVISWLDNNQTAEKDEYESQQKELEGVANPIISAAY 607          
BLAST of CX298120 vs. ExPASy Swiss-Prot
Match: HSP70_CLAHE (Heat shock 70 kDa protein OS=Cladosporium herbarum GN=HSP70 PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 7.877e-17
Identity = 36/82 (43.90%), Postives = 57/82 (69.51%), Query Frame = 2
Query:    2 EEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 247
            E    +++AKN LE+YAY+++NTV D K+  KL   DK+ +  AID+ + W+D NQ A  +E+E + K+LES+ NP++ K+Y
Sbjct:  529 EAEAGRIQAKNGLESYAYSLKNTVSDPKVEEKLSAEDKETLTGAIDKTVAWIDENQTATKEEYEAEQKQLESVANPVMMKIY 610          
BLAST of CX298120 vs. ExPASy Swiss-Prot
Match: HSP74_PARLI (Heat shock 70 kDa protein IV OS=Paracentrotus lividus GN=HSP70IV PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.029e-16
Identity = 36/82 (43.90%), Postives = 58/82 (70.73%), Query Frame = 2
Query:    2 EEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 247
            +  ++++ AKN LE YA+N+++ V D    SKL P DK+ +  A++  +QWLDSN LA+ +EF  K++EL+  C+PI+AKM+
Sbjct:  530 DAQRERINAKNQLEGYAFNLKSAVDDAAAQSKLSPGDKETVTKAVNDVLQWLDSNSLADKEEFTYKLEELQKTCSPIMAKMH 611          
BLAST of CX298120 vs. ExPASy Swiss-Prot
Match: HSP70_THEAN (Heat shock 70 kDa protein OS=Theileria annulata GN=TA11610 PE=3 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 1.029e-16
Identity = 34/83 (40.96%), Postives = 60/83 (72.29%), Query Frame = 2
Query:    2 EEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 250
            E+ ++ VE+++ LENY Y+M+NT+ ++++  KL   +       I  A++W+++NQLAE DE+EDK+K +E +CNP++ K+YQ
Sbjct:  531 EKRRRCVESRHKLENYCYSMKNTLSEDQVKQKLGADEVDSALSTITDALKWVEANQLAEHDEYEDKLKHVEGVCNPLVTKLYQ 613          
BLAST of CX298120 vs. ExPASy Swiss-Prot
Match: BIP2_DICDI (Luminal-binding protein 2 OS=Dictyostelium discoideum GN=bip2 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.029e-16
Identity = 41/80 (51.25%), Postives = 57/80 (71.25%), Query Frame = 2
Query:   11 KKKVEAKNALENYAYNMRNTVKD-EKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 247
            K++VEAKN LENY Y ++NT+ D +KIG K++  DK+ IE AI  A+ WLD N  AE +EF+++ K LE I  PI +K+Y
Sbjct:  559 KERVEAKNTLENYIYQIKNTIGDKDKIGGKIESDDKETIETAISDALSWLDVNSSAEKEEFDEQYKILEKIVQPIFSKLY 638          
BLAST of CX298120 vs. ExPASy Swiss-Prot
Match: HSP7C_DROME (Heat shock 70 kDa protein cognate 3 OS=Drosophila melanogaster GN=Hsc70-3 PE=2 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 1.755e-16
Identity = 37/81 (45.68%), Postives = 64/81 (79.01%), Query Frame = 2
Query:   11 KKKVEAKNALENYAYNMRNTVKD-EKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 250
            K++VE++N LE+YAY+++N + D +K+G+KL   +K K+E AID++I+WL+ N  A+ +E++ + K+LE+I  P+IAK+YQ
Sbjct:  556 KERVESRNELESYAYSLKNQIGDKDKLGAKLSDDEKNKLESAIDESIKWLEQNPDADPEEYKKQKKDLEAIVQPVIAKLYQ 636          
BLAST of CX298120 vs. ExPASy Swiss-Prot
Match: GRP78_RAT (78 kDa glucose-regulated protein OS=Rattus norvegicus GN=Hspa5 PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.755e-16
Identity = 37/80 (46.25%), Postives = 62/80 (77.50%), Query Frame = 2
Query:   11 KKKVEAKNALENYAYNMRNTVKD-EKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 247
            K++++ +N LE+YAY+++N + D EK+G KL P DK+ +E A+++ I+WL+S+Q A+ ++F+ K KELE I  PII+K+Y
Sbjct:  556 KERIDTRNELESYAYSLKNQIGDKEKLGGKLSPEDKETMEKAVEEKIEWLESHQDADIEDFKAKKKELEEIVQPIISKLY 635          
The following BLAST results are available for this feature:
BLAST of CX298120 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 157
Match NameE-valueIdentityDescription
HSP70_XENLA1.215e-1744.58Heat shock 70 kDa protein OS=Xenopus laevis PE=2 S... [more]
HSP70_AJECA2.073e-1743.90Heat shock 70 kDa protein OS=Ajellomyces capsulata... [more]
HSP70_PENCI6.031e-1748.78Heat shock 70 kDa protein (Fragment) OS=Penicilliu... [more]
HSP70_EMENI6.031e-1746.34Heat shock 70 kDa protein OS=Emericella nidulans G... [more]
HSP70_CLAHE7.877e-1743.90Heat shock 70 kDa protein OS=Cladosporium herbarum... [more]
HSP74_PARLI1.029e-1643.90Heat shock 70 kDa protein IV OS=Paracentrotus livi... [more]
HSP70_THEAN1.029e-1640.96Heat shock 70 kDa protein OS=Theileria annulata GN... [more]
BIP2_DICDI1.029e-1651.25Luminal-binding protein 2 OS=Dictyostelium discoid... [more]
HSP7C_DROME1.755e-1645.68Heat shock 70 kDa protein cognate 3 OS=Drosophila ... [more]
GRP78_RAT1.755e-1646.2578 kDa glucose-regulated protein OS=Rattus norvegi... [more]

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Properties
Property NameValue
Genbank descriptionC06008G09SK RindPdig24 Citrus clementina cDNA clone C06008G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX298120 ID=CX298120; Name=CX298120; organism=Citrus clementina; type=EST; length=607bp
CGAGGAGCACAAGAAGAAGGTCGAGGCCAAGAATGCCTTGGAAAACTATG
CCTACAATATGAGGAACACTGTCAAGGACGAGAAGATCGGCTCCAAACTT
GATCCAGCTGACAAGAAGAAGATTGAGGATGCCATTGATCAGGCAATTCA
ATGGCTTGATAGCAACCAGCTGGCTGAGGCCGATGAATTTGAAGACAAGA
TGAAGGAGCTTGAGAGCATCTGCAATCCCATCATTGCCAAGATGTATCAA
GGTGCTGGTGGTGATATGGGCGGTGGCATGGATGATGATGCTCCTCCAGC
TGGTGGCAGTGCCGCCGGTCCCAAGATTGAGGAAGTTGACTAAGCTTCCA
GTTTTATTTTGTTGTGTTTGTGGGAGGTCGGTTTTTTGACGGTGGGAAAA
CTGGACGTTTGGTTTTTATCTTATGTTGTTTTAGCCTTAGGATGAATATT
AATTTTTCCTTTTCTTTTTATTTTTCAAATTTTACTTTTAATTCGGACCA
ATTTATATAATGAATATTTTTCGGTCCCTAAATATTGTCTCTTTTGCTTG
AAGCCTTATTAATTATGAACAAAAGTCATGCCACCCCATGAACGTTTGTG
GCCCAAA
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