CX298129
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX298129 vs. ExPASy Swiss-Prot
Match: GRPE_PROMT (Protein grpE OS=Prochlorococcus marinus (strain NATL2A) GN=grpE PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 8.768e-16 Identity = 40/103 (38.83%), Postives = 64/103 (62.14%), Query Frame = 2 Query: 290 DLERKVVNLSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEKINNSYQSIYKQLVEILGSLGVVPVETV 598 D E ++ L +E ++ +RI+ADFDNFRKR +++ L + +L ++DNFERA+ Q+ + E + ++ SYQ +YKQLVE+L +LGV P+ V Sbjct: 75 DTEARLQQLEKEHETLNSQYMRIAADFDNFRKRQTRDQDDLKIQLTCTTLSEILPIVDNFERARQQLNPEGEEAQALHRSYQGLYKQLVEVLKNLGVAPMRVV 177
BLAST of CX298129 vs. ExPASy Swiss-Prot
Match: GRPE_PROM1 (Protein grpE OS=Prochlorococcus marinus (strain NATL1A) GN=grpE PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 8.768e-16 Identity = 40/103 (38.83%), Postives = 64/103 (62.14%), Query Frame = 2 Query: 290 DLERKVVNLSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEKINNSYQSIYKQLVEILGSLGVVPVETV 598 D E ++ L +E ++ +RI+ADFDNFRKR +++ L + +L ++DNFERA+ Q+ + E + ++ SYQ +YKQLVE+L +LGV P+ V Sbjct: 75 DTEARLQQLEKEHETLNSQYMRIAADFDNFRKRQTRDQDDLKIQLTCTTLSEILPIVDNFERARQQLNPEGEEAQALHRSYQGLYKQLVEVLKNLGVAPMRVV 177
BLAST of CX298129 vs. ExPASy Swiss-Prot
Match: GRPE_SYNS9 (Protein grpE OS=Synechococcus sp. (strain CC9902) GN=grpE PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.496e-15 Identity = 41/103 (39.81%), Postives = 67/103 (65.05%), Query Frame = 2 Query: 293 LERKVVNLSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEKINNSYQSIYKQLVEILGSLGVVPVETVG 601 LE+++ +L +E A +++ +RI+ADFDNFRKR +++ L + +L V+DNFERA+ Q+ + E + ++ SYQ +YKQLV++L GV +E VG Sbjct: 54 LEQELNSLKQEHEAVQSQYMRIAADFDNFRKRQARDQDDLRQQLVCSTLTEILPVVDNFERARQQLNPEGEEAQALHRSYQGLYKQLVDVLKQQGVARMEVVG 156
BLAST of CX298129 vs. ExPASy Swiss-Prot
Match: GRPE_PROMP (Protein grpE OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=grpE PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.496e-15 Identity = 44/118 (37.29%), Postives = 71/118 (60.17%), Query Frame = 2 Query: 275 EDEKI---DLERKVVN-------LSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEKINNSYQSIYKQLVEILGSLGVVPVETV 598 +DE I DL+ + N L +E +++ +RI+ADFDNFRKR +++ L + + +L ++DNFERA+ Q+K ++E + ++ SYQ +YKQLVE+L GV P+ V Sbjct: 43 DDENIYAEDLKNTITNNDARLEQLEKEHETLKSQYVRIAADFDNFRKRQSRDQDDLKVQLVSKALTAILPIVDNFERARQQLKPESEEAQTLHRSYQGLYKQLVEVLKQQGVSPMRVV 160
BLAST of CX298129 vs. ExPASy Swiss-Prot
Match: GRPE_SYNPX (Protein grpE OS=Synechococcus sp. (strain WH8102) GN=grpE PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.551e-15 Identity = 39/103 (37.86%), Postives = 65/103 (63.11%), Query Frame = 2 Query: 293 LERKVVNLSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEKINNSYQSIYKQLVEILGSLGVVPVETVG 601 LE ++ L +E +++ +RI+ADFDNFRKR +++ + + +L V+DNFERA+ Q+ ++E + ++ SYQ +YKQLV++L GV +E VG Sbjct: 49 LEHELQTLKQEHETLQSQYMRIAADFDNFRKRQSRDQEDIRQQLVCSTLSEILPVVDNFERARQQLNPESEEAQALHRSYQGLYKQLVDVLKQQGVARMEVVG 151
BLAST of CX298129 vs. ExPASy Swiss-Prot
Match: GRPE_SYNSC (Protein grpE OS=Synechococcus sp. (strain CC9605) GN=grpE PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 9.694e-15 Identity = 40/108 (37.04%), Postives = 65/108 (60.19%), Query Frame = 2 Query: 278 DEKIDLERKVVNLSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEKINNSYQSIYKQLVEILGSLGVVPVETVG 601 D LE+++ L +E ++ +RI+ADFDNFRKR +++ + + +L V+DNFERA+ Q+ + E + ++ SYQ +YKQLVE+L GV ++ VG Sbjct: 45 DRMQQLEQELSALKQEHDTLNSQYMRIAADFDNFRKRQSRDQDDMRKQLVCSTLTEILPVVDNFERARQQLNPEGEEAQALHRSYQGLYKQLVEVLKQQGVARMDVVG 152
BLAST of CX298129 vs. ExPASy Swiss-Prot
Match: GRPE_CLOPH (Protein grpE OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=grpE PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.119e-13 Identity = 47/132 (35.61%), Postives = 71/132 (53.79%), Query Frame = 2 Query: 206 YKEALASNDDTKAAEIEALLKSFEDEKIDLERKVVNLSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEKINNSYQSIYKQLVEILGSLGVVPVETVG 601 Y+E AS D +K KSF +K ++K E++ R++R A+F+NFRKRTEKE+ + +++ER+L V+DNFER + V+ E + + IYKQLV L + GV +E G Sbjct: 56 YEEDTASEDGSKEK------KSFFKKKEKKDKK----DEKIDELTDRLMRNMAEFENFRKRTEKEKTQMFEVGAKDIIERILPVIDNFERGLAAVSVE-EKDSAFVQGIEKIYKQLVTTLEAAGVKQIEAAG 176
BLAST of CX298129 vs. ExPASy Swiss-Prot
Match: GRPE_ANOFW (Protein grpE OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=grpE PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.119e-13 Identity = 45/142 (31.69%), Postives = 75/142 (52.82%), Query Frame = 2 Query: 191 ETLQSYKEAL---ASNDDTKAAEIEALLKSFEDEKIDLERKVVNLSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEKINNSYQSIYKQLVEILGSLGVVPVETVGNP 607 ETL+ +++A A + + E EA + +DE K+ L +L+ R LR+ ADFDN+R+R + + ++ LL +LDNFERA Q++V+ E + + + +Y+ L+E L GV +E+VG P Sbjct: 17 ETLEQHEDAQSEQAPEEQVEQVENEATQQEEKDELTVAYEKIAQLEAKLAETENRFLRLHADFDNYRRRVRLDMEAAEKYRAQSLVSDLLPILDNFERA-LQVQVEDEKAKLLLQGMEMVYRSLIEALKKEGVEAIESVGKP 157
BLAST of CX298129 vs. ExPASy Swiss-Prot
Match: GRPE_BACTR (Protein grpE OS=Bacillus thermoglucosidasius GN=grpE PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.003e-11 Identity = 51/164 (31.10%), Postives = 81/164 (49.39%), Query Frame = 2 Query: 164 EEAPTSFIMETLQS--YKEALASNDDTKAAEIEALLKSFEDEKIDLERKVVNLSEELSAERARI--------------LRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEKINNSYQSIYKQLVEILGSLGVVPVETVGNP 607 +E+P + E L+ ++E A + K E + +DE D E+ +EEL+A A+I LR+ ADF+NFR+RT +E + ++ LL VLDNFERA +IK + E + I + +Y+ +++ L GV +E VG P Sbjct: 16 QESPNAERQEELKENEHQEKNAPEEQEKVREENGRQDAQKDEIGDPEKAKEEQNEELAAANAKIAELEAKIKEMENRYLRLYADFENFRRRTRREMEAAEKYRAQSLVSDLLPVLDNFERA-LKIKAEDEQAKSILQGMEMVYRSVLDALKKEGVEAIEAVGKP 178
BLAST of CX298129 vs. ExPASy Swiss-Prot
Match: GRPE_CLOAB (Protein grpE OS=Clostridium acetobutylicum GN=grpE PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.310e-11 Identity = 43/147 (29.25%), Postives = 75/147 (51.02%), Query Frame = 2 Query: 164 EEAPTSFIMETLQSYKEALASNDDTKAAEIEALLKSFEDEKIDLERKVVNLSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGE-EKINNSYQSIYKQLVEILGSLGVVPVETVG 601 E+ T E ++ + S+ + ++ E ++ +E + L+ + L EL A + R+LR+SA+++N+R RT KE+ + T+A +V+ +L LDN ERA TEG E I + + KQ L LG+ + + G Sbjct: 12 EDEETIASQEEIEVEGNSEESSKEEESNNSEISDENLSEENLKLKDENEKLKNELDAAKDRLLRLSAEYENYRNRTAKEKEGIYTDACSDVINEMLPTLDNLERA-----ASTEGSAEDIKKGVEMVVKQFKNSLSKLGIEEIPSEG 153 The following BLAST results are available for this feature:
BLAST of CX298129 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 39
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Sequences
The
following sequences are available for this feature:
EST sequence >CX298129 ID=CX298129; Name=CX298129; organism=Citrus clementina; type=EST; length=613bpback to top |