CX298270
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX298270 vs. ExPASy Swiss-Prot
Match: FER2_ARATH (Ferredoxin-2, chloroplastic OS=Arabidopsis thaliana GN=FD2 PE=1 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.679e-33 Identity = 73/128 (57.03%), Postives = 92/128 (71.88%), Query Frame = 1 Query: 148 SPSSLGSVKGIS--KTFGLKCSP---NFQASMAVYKIKLIGPNGEEHEFEAQEDQYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDNQMEAGYLLTCISYPTSDCVIQSHKEEEL 516 +P SL S+ + FGLK +MA YK+K I P GE E E +D Y+LDAAEEAG+DLPYSCRAG+CS+CAGK+VSGSVDQSD SFLDD Q+ G++LTC +YPTSD I++HKEE++ Sbjct: 21 APISLRSLPSANTQSLFGLKSGTARGGRVTAMATYKVKFITPEGEL-EVECDDDVYVLDAAEEAGIDLPYSCRAGSCSSCAGKVVSGSVDQSDQSFLDDEQIGEGFVLTCAAYPTSDVTIETHKEEDI 147
BLAST of CX298270 vs. ExPASy Swiss-Prot
Match: FER_HORVU (Ferredoxin OS=Hordeum vulgare PE=1 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 6.111e-33 Identity = 66/96 (68.75%), Postives = 79/96 (82.29%), Query Frame = 1 Query: 229 AVYKIKLIGPNGEEHEFEAQEDQYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDNQMEAGYLLTCISYPTSDCVIQSHKEEEL 516 A YK+KL+ P GE E E +D YILD AEE G+DLPYSCRAG+CS+CAGKLVSG +DQSD SFLDD+QME G++LTC +YP SD VI++HKEEEL Sbjct: 1 ATYKVKLVTPEGEV-ELEVPDDVYILDQAEEEGIDLPYSCRAGSCSSCAGKLVSGEIDQSDQSFLDDDQMEEGWVLTCAAYPKSDVVIETHKEEEL 95
BLAST of CX298270 vs. ExPASy Swiss-Prot
Match: FER1_ANAVT (Ferredoxin-1 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=petF1 PE=1 SV=2) HSP 1 Score: 140.969 bits (354), Expect = 6.111e-33 Identity = 66/98 (67.35%), Postives = 81/98 (82.65%), Query Frame = 1 Query: 226 MAVYKIKLIGP-NGEEHEFEAQEDQYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDNQMEAGYLLTCISYPTSDCVIQSHKEEEL 516 MA +K+ LI G + + +D+YILDAAEE G DLP+SCRAGACSTCAGKLVSG+VDQSD SFLDD+Q+EAGY+LTC++YPTSD IQ+HKEE+L Sbjct: 1 MATFKVTLINEAEGTSNTIDVPDDEYILDAAEEQGYDLPFSCRAGACSTCAGKLVSGTVDQSDQSFLDDDQIEAGYVLTCVAYPTSDVTIQTHKEEDL 98
BLAST of CX298270 vs. ExPASy Swiss-Prot
Match: FER_BRANA (Ferredoxin OS=Brassica napus PE=1 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 7.982e-33 Identity = 65/96 (67.71%), Postives = 80/96 (83.33%), Query Frame = 1 Query: 229 AVYKIKLIGPNGEEHEFEAQEDQYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDNQMEAGYLLTCISYPTSDCVIQSHKEEEL 516 A YK+K I P GE+ E E +D Y+LDAAEEAG+DLPYSCRAG+CS+CAGK+VSG VDQSD SFLDD+Q+ G++LTC +YPTSD I++HKEEEL Sbjct: 1 ATYKVKFITPEGEQ-EVECDDDVYVLDAAEEAGIDLPYSCRAGSCSSCAGKVVSGFVDQSDESFLDDDQIAEGFVLTCAAYPTSDVTIETHKEEEL 95
BLAST of CX298270 vs. ExPASy Swiss-Prot
Match: FER1_SOLLC (Ferredoxin-1, chloroplastic OS=Solanum lycopersicum GN=SEND33 PE=2 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 7.982e-33 Identity = 73/135 (54.07%), Postives = 96/135 (71.11%), Query Frame = 1 Query: 127 LSRNLIKSPSSLGSVKGISKT----FGLKCSPNFQAS-MAVYKIKLIGPNGEEHEFEAQEDQYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDNQMEAGYLLTCISYPTSDCVIQSHKEEEL 516 +S + + ++ S+K IS FGLK N + + MA YK+KLI P G EFE +D YILD AEE G DLPYSCRAG+CS+CAGK+ +GSVDQSDG+FLD++Q AG++LTC++YP D I++HKEEEL Sbjct: 9 ISTSFLPRKPAVTSLKAISNVGEALFGLKSGRNGRITCMASYKVKLITPEGPI-EFECPDDVYILDQAEEEGHDLPYSCRAGSCSSCAGKVTAGSVDQSDGNFLDEDQEAAGFVLTCVAYPKGDVTIETHKEEEL 142
BLAST of CX298270 vs. ExPASy Swiss-Prot
Match: FER3_RAPSA (Ferredoxin, leaf L-A OS=Raphanus sativus PE=1 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.361e-32 Identity = 63/96 (65.62%), Postives = 81/96 (84.38%), Query Frame = 1 Query: 229 AVYKIKLIGPNGEEHEFEAQEDQYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDNQMEAGYLLTCISYPTSDCVIQSHKEEEL 516 A YK+K I P GE+ E E +D Y+LDAAEEAG+DLPYSCRAG+CS+CAGK+VSGSVDQSD SFLDD+Q+ G++LTC +YPTSD I++H+EE++ Sbjct: 1 ATYKVKFITPEGEQ-EVECDDDVYVLDAAEEAGIDLPYSCRAGSCSSCAGKVVSGSVDQSDQSFLDDDQIAEGFVLTCAAYPTSDVTIETHREEDM 95
BLAST of CX298270 vs. ExPASy Swiss-Prot
Match: FER1_NOSMU (Ferredoxin-1 OS=Nostoc muscorum PE=1 SV=2) HSP 1 Score: 139.813 bits (351), Expect = 1.361e-32 Identity = 62/95 (65.26%), Postives = 79/95 (83.16%), Query Frame = 1 Query: 232 VYKIKLIGPNGEEHEFEAQEDQYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDNQMEAGYLLTCISYPTSDCVIQSHKEEEL 516 VYK+ L+ G E + +D+YILD AE+ G+DLPYSCRAGACSTCAGK+VSG+VDQSD SFLDD+Q+E GY+LTC++YPTSD I++HKEE+L Sbjct: 4 VYKVTLVDQEGTETTIDVPDDEYILDIAEDQGLDLPYSCRAGACSTCAGKIVSGTVDQSDQSFLDDDQIEKGYVLTCVAYPTSDLKIETHKEEDL 98
BLAST of CX298270 vs. ExPASy Swiss-Prot
Match: FER1_CYAPA (Ferredoxin-1 OS=Cyanophora paradoxa GN=petF PE=1 SV=3) HSP 1 Score: 139.813 bits (351), Expect = 1.361e-32 Identity = 64/98 (65.31%), Postives = 81/98 (82.65%), Query Frame = 1 Query: 226 MAVYKIKLI-GPNGEEHEFEAQEDQYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDNQMEAGYLLTCISYPTSDCVIQSHKEEEL 516 MAVYK++LI G + E +D+YILDAAEE G+DLPYSCRAGACSTCAGK+V G+VDQSD SFLDD Q+ AGY+LTC++YP+SDC +++H+EE L Sbjct: 1 MAVYKVRLICEEQGLDTTIECPDDEYILDAAEEQGIDLPYSCRAGACSTCAGKVVEGTVDQSDQSFLDDAQLAAGYVLTCVAYPSSDCTVKTHQEESL 98
BLAST of CX298270 vs. ExPASy Swiss-Prot
Match: FER_THEVL (Ferredoxin-1 OS=Thermosynechococcus vulcanus GN=petF1 PE=3 SV=2) HSP 1 Score: 139.428 bits (350), Expect = 1.778e-32 Identity = 62/97 (63.92%), Postives = 79/97 (81.44%), Query Frame = 1 Query: 226 MAVYKIKLIGPNGEEHEFEAQEDQYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDNQMEAGYLLTCISYPTSDCVIQSHKEEEL 516 MA YK+ L+ P+G E + ED+YILD AEE G+DLP+SCRAGACSTCAGKL+ G VDQSD SFLDD+Q+E G++LTC++YP SDC I +++EEEL Sbjct: 1 MATYKVTLVRPDGSETTIDVPEDEYILDVAEEQGLDLPFSCRAGACSTCAGKLLEGEVDQSDQSFLDDDQIEKGFVLTCVAYPRSDCKILTNQEEEL 97
BLAST of CX298270 vs. ExPASy Swiss-Prot
Match: FER_THEEB (Ferredoxin-1 OS=Thermosynechococcus elongatus (strain BP-1) GN=petF1 PE=1 SV=2) HSP 1 Score: 139.428 bits (350), Expect = 1.778e-32 Identity = 62/97 (63.92%), Postives = 79/97 (81.44%), Query Frame = 1 Query: 226 MAVYKIKLIGPNGEEHEFEAQEDQYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDNQMEAGYLLTCISYPTSDCVIQSHKEEEL 516 MA YK+ L+ P+G E + ED+YILD AEE G+DLP+SCRAGACSTCAGKL+ G VDQSD SFLDD+Q+E G++LTC++YP SDC I +++EEEL Sbjct: 1 MATYKVTLVRPDGSETTIDVPEDEYILDVAEEQGLDLPFSCRAGACSTCAGKLLEGEVDQSDQSFLDDDQIEKGFVLTCVAYPRSDCKILTNQEEEL 97 The following BLAST results are available for this feature:
BLAST of CX298270 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 109
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Sequences
The
following sequences are available for this feature:
EST sequence >CX298270 ID=CX298270; Name=CX298270; organism=Citrus clementina; type=EST; length=705bpback to top |