CX298273
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX298273 vs. ExPASy Swiss-Prot
Match: Y019_PROM5 (UPF0133 protein P9515_00191 OS=Prochlorococcus marinus (strain MIT 9515) GN=P9515_00191 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 5.226e-13 Identity = 41/102 (40.20%), Postives = 59/102 (57.84%), Query Frame = 3 Query: 33 LGNMQNLYETVKKAQMVVQVEAVRVQKELAAAEFDGYCEGELIKVTLSGNQQPVRTEITEAAMELGAEKLSLLVTEAYKDAHQKSVLAMKERMSDLAQSLGM 338 L N L E KKA+ + Q A ++Q EL + E +G + E+IKV +SGNQ P+R E+ + E E++ + EA K AH+ S MKERM+DL L + Sbjct: 6 LPNFGQLTEAFKKAKEIQQ-NAQKLQDELESMEIEGKSDDEMIKVWISGNQLPLRVEVKDTIAESNKEEIEKNILEAIKKAHETSTTTMKERMNDLTGGLNL 106
BLAST of CX298273 vs. ExPASy Swiss-Prot
Match: Y020_PROMP (UPF0133 protein PMM0020 OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=PMM0020 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 8.913e-13 Identity = 41/102 (40.20%), Postives = 58/102 (56.86%), Query Frame = 3 Query: 33 LGNMQNLYETVKKAQMVVQVEAVRVQKELAAAEFDGYCEGELIKVTLSGNQQPVRTEITEAAMELGAEKLSLLVTEAYKDAHQKSVLAMKERMSDLAQSLGM 338 L N L E KKA+ + Q A ++Q EL + E +G + E+IKV +SGNQ P+R E+ E E++ + EA K AH+ S MKERM+DL L + Sbjct: 6 LPNFGQLTEAFKKAKEIQQ-NAQKLQDELESMEIEGKSDDEMIKVWISGNQLPLRVEVNENISTANKEEIEKNILEAIKKAHESSTTTMKERMNDLTGGLNL 106
BLAST of CX298273 vs. ExPASy Swiss-Prot
Match: Y1847_SYNY3 (UPF0133 protein slr1847 OS=Synechocystis sp. (strain PCC 6803) GN=slr1847 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.520e-12 Identity = 43/103 (41.75%), Postives = 60/103 (58.25%), Query Frame = 3 Query: 33 LGNMQNLYETVKKAQMVVQVEAVRVQKELAAAEFDGYCEGELIKVTLSGNQQPVRTEITEAAMELGAEKLSLLVTEAYKDAHQKSVLAMKERMSDLAQSLGMP 341 LG ++ L E +KAQ V Q A +Q+EL E G L+ V +SGNQ+P+ EI +A+E GAE LS VTEA K A+ +S M+ +M +L L +P Sbjct: 11 LGKIKELQEAFQKAQQV-QEGAKVLQEELERMEIPGKSADGLVTVLMSGNQEPLSIEIDPSALEKGAEGLSASVTEAMKAAYAESTETMRSKMEELTSGLNLP 112
BLAST of CX298273 vs. ExPASy Swiss-Prot
Match: Y019_PROM0 (UPF0133 protein P9301_00191 OS=Prochlorococcus marinus (strain MIT 9301) GN=P9301_00191 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.520e-12 Identity = 40/102 (39.22%), Postives = 59/102 (57.84%), Query Frame = 3 Query: 33 LGNMQNLYETVKKAQMVVQVEAVRVQKELAAAEFDGYCEGELIKVTLSGNQQPVRTEITEAAMELGAEKLSLLVTEAYKDAHQKSVLAMKERMSDLAQSLGM 338 L N L E KKA+ + Q +A ++Q EL E +G + E+IKV +SGNQ P++ E+ E + EK+ + +A K AH+ S MKERM+DL L + Sbjct: 6 LPNFGQLTEAFKKAKQIQQ-DAQKLQDELENMEIEGKSDDEMIKVWISGNQLPLKVEVQENFLNADKEKIEQNILQAIKKAHELSTTTMKERMNDLTGGLNL 106
BLAST of CX298273 vs. ExPASy Swiss-Prot
Match: Y019_PROM2 (UPF0133 protein P9215_00191 OS=Prochlorococcus marinus (strain MIT 9215) GN=P9215_00191 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.986e-12 Identity = 39/102 (38.24%), Postives = 59/102 (57.84%), Query Frame = 3 Query: 33 LGNMQNLYETVKKAQMVVQVEAVRVQKELAAAEFDGYCEGELIKVTLSGNQQPVRTEITEAAMELGAEKLSLLVTEAYKDAHQKSVLAMKERMSDLAQSLGM 338 L N L E KKA+ + Q +A ++Q EL E +G + E+IKV +SGNQ P++ E+ E + EK+ + +A + AH+ S MKERM+DL L + Sbjct: 6 LPNFGQLTEAFKKAKQIQQ-DAQKLQDELENMEIEGKSDDEMIKVWISGNQLPLKVEVQENILNADKEKIEKNILQAIQKAHESSTTTMKERMNDLTGGLNL 106
BLAST of CX298273 vs. ExPASy Swiss-Prot
Match: Y020_PROM9 (UPF0133 protein PMT9312_0020 OS=Prochlorococcus marinus (strain MIT 9312) GN=PMT9312_0020 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.593e-12 Identity = 39/102 (38.24%), Postives = 59/102 (57.84%), Query Frame = 3 Query: 33 LGNMQNLYETVKKAQMVVQVEAVRVQKELAAAEFDGYCEGELIKVTLSGNQQPVRTEITEAAMELGAEKLSLLVTEAYKDAHQKSVLAMKERMSDLAQSLGM 338 L N L E KKA+ + Q +A ++Q EL E +G + E++KV +SGNQ P+R E+ E + EK+ + +A + AH+ S MKERM+DL L + Sbjct: 6 LPNFGQLTEAFKKAKQIQQ-DAQKLQDELENMEIEGESDDEMVKVWISGNQLPLRVEVQENILNSDKEKIEQNILQAIQKAHELSTTTMKERMNDLTGGLNL 106
BLAST of CX298273 vs. ExPASy Swiss-Prot
Match: Y019_PROMS (UPF0133 protein A9601_00191 OS=Prochlorococcus marinus (strain AS9601) GN=A9601_00191 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 5.778e-12 Identity = 39/102 (38.24%), Postives = 58/102 (56.86%), Query Frame = 3 Query: 33 LGNMQNLYETVKKAQMVVQVEAVRVQKELAAAEFDGYCEGELIKVTLSGNQQPVRTEITEAAMELGAEKLSLLVTEAYKDAHQKSVLAMKERMSDLAQSLGM 338 L N L E KKA+ + Q +A ++Q EL E +G + E+IKV +SGNQ P++ E+ E E++ + +A K AH+ S MKERM+DL L + Sbjct: 6 LPNFGQLTEAFKKAKQIQQ-DAQKLQDELENMEIEGKSDDEMIKVWISGNQLPLKVEVQENIFNSNKEQIEKNILQAIKKAHELSTTTMKERMNDLTGGLNL 106
BLAST of CX298273 vs. ExPASy Swiss-Prot
Match: Y3498_GLOVI (UPF0133 protein glr3498 OS=Gloeobacter violaceus GN=glr3498 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 9.855e-12 Identity = 40/108 (37.04%), Postives = 58/108 (53.70%), Query Frame = 3 Query: 27 GILGNMQNLYETVKKAQMVVQVEAVRVQKELAAAEFDGYCEGELIKVTLSGNQQPVRTEITEAAMELGAEKLSLLVTEAYKDAHQKSVLAMKERMSDLAQSLGMPQGL 350 G +G Q + VK+ +Q + ++Q ELAA +G G L+KVTLSGNQ+P I + E + L+ AYKDA+ KS MK +M +L + +P GL Sbjct: 6 GPMGQFQEALKRVKQ----IQEGSAKLQDELAALSIEGVAGGGLVKVTLSGNQEPTGVTIDPQLLSESKEVVEDLLLTAYKDAYTKSAETMKAKMQELTGGMELPPGL 109 The following BLAST results are available for this feature:
BLAST of CX298273 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >CX298273 ID=CX298273; Name=CX298273; organism=Citrus clementina; type=EST; length=605bpback to top |