CX298297

Overview
NameCX298297
Unique NameCX298297
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length751
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX298297 vs. ExPASy Swiss-Prot
Match: GSK3_DICDI (Glycogen synthase kinase-3 OS=Dictyostelium discoideum GN=gskA PE=1 SV=2)

HSP 1 Score: 131.724 bits (330), Expect = 4.086e-30
Identity = 72/200 (36.00%), Postives = 118/200 (59.00%), Query Frame = 3
Query:   45 IRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT---DELNAYLNKYHLELD-PQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQVR 632
            ++ YIY+L ++++Y HS GI HRD+KP N+++D     L+L D+G A+    G+     + SR+++ PEL+    +Y  ++D+WSLGC+ A ++   +P F G +  DQLV+I KVLGT   ++++A +N Y+     P++ A        PW +   A +   V  E+ID + K+L YD   RL   E  AHP+F ++R
Sbjct:  156 VKLYIYQLCRSINYIHSLGICHRDIKPQNLLLDTSTSTLKLCDFGSAKILIKGETNVSYICSRHYRAPELIFGSTNYTTTIDVWSLGCVLAELLL-GQPLFPGENGIDQLVEIIKVLGTPTKEQIHA-MNPYYTSFKFPEIKA-------NPWPRVFKAKD---VPAESIDLISKILLYDPSSRLKPVEICAHPFFDELR 343          
BLAST of CX298297 vs. ExPASy Swiss-Prot
Match: HOG1_WALIC (Mitogen-activated protein kinase HOG1 (Fragment) OS=Wallemia ichthyophaga GN=HOG1 PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 6.969e-30
Identity = 77/215 (35.81%), Postives = 127/215 (59.07%), Query Frame = 3
Query:   45 IRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT---DELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQVRAAESSRTRA*QPASWS 680
            ++Y++Y++L+AL + H  G++HRD+KP N++I+     L++ D+GLA    P  +    V++RY+K PE+++  Q+YD ++D+WS+GC+FA MI  + P F G D+  QL  I ++LG+   D +N   ++        +DAL  RH      +F NA      + E ID L+K+L ++ + R+TA +A+AHPY A     E   T A +   WS
Sbjct:   52 VQYFLYQMLRALKFVHPAGVVHRDLKPSNILINENC-DLKICDFGLARLQDP--QMTGYVSTRYYKAPEIMLTWQEYDSAVDIWSVGCIFAEMIDGR-PIFPGKDHVHQLTVITELLGSPPEDVINTITSENTRRF---VDALPKRHKISFADRFPNA------NAEEIDLLEKMLDFNPKKRITAADALAHPYLAPYHDPEDEPT-ANERFDWS 252          
BLAST of CX298297 vs. ExPASy Swiss-Prot
Match: GSK3A_MOUSE (Glycogen synthase kinase-3 alpha OS=Mus musculus GN=Gsk3a PE=1 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 1.552e-29
Identity = 75/199 (37.69%), Postives = 110/199 (55.28%), Query Frame = 3
Query:   45 IRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTD--ELNAYLNKYHLELD-PQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQVR 632
            I+ Y+Y+L ++L Y HSQG+ HRD+KP N+++D +   L+L D+G A+    G+     + SRY++ PEL+    DY  S+D+WS GC+ A ++   +P F G    DQLV+I KVLGT   E    +N  + E   PQ+ A        PW+K   +       PEAI     LL Y    RL+  EA AH +F ++R
Sbjct:  221 IKVYMYQLFRSLAYIHSQGVCHRDIKPQNLLVDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLL-GQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKA-------HPWTKVFKSSK---TPPEAIALCSSLLEYTPSSRLSPLEACAHSFFDELR 408          
BLAST of CX298297 vs. ExPASy Swiss-Prot
Match: CKB21_ORYSJ (Cyclin-dependent kinase B2-1 OS=Oryza sativa subsp. japonica GN=CDKB2-1 PE=1 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.552e-29
Identity = 64/196 (32.65%), Postives = 112/196 (57.14%), Query Frame = 3
Query:   45 IRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLA-EFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQV 629
            ++  +Y+L K + +CH +G++HRD+KPHN+++D +   L++ D GL+  F  P K+Y   + + +++ PE+L+    Y   +D+WS+GC+FA +    +P F G     QL+ I K+LGT     +         P +  L   H    W+    +D  H +  +A+D L+K+L+Y+   R++A++AM HPYF  V
Sbjct:  136 VKILMYQLCKGVAFCHGRGVLHRDLKPHNLLMDRKTMALKIADLGLSRSFTVPLKKYTHEILTLWYRAPEVLLGAAHYSTPVDIWSVGCIFAELA-TNQPLFAGDSEVQQLLHIFKLLGTPNEQVW---------PGVSKLPNWHEYPQWNPSKVSDLVHGLDADALDLLEKMLQYEPSKRISAKKAMEHPYFNDV 321          
BLAST of CX298297 vs. ExPASy Swiss-Prot
Match: KSGT_BRANA (Shaggy-related protein kinase theta OS=Brassica napus PE=2 SV=2)

HSP 1 Score: 129.028 bits (323), Expect = 2.648e-29
Identity = 72/205 (35.12%), Postives = 114/205 (55.61%), Query Frame = 3
Query:   45 IRYYIYELLKALDYCHSQ-GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT---DELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQVRAAESS 647
            ++ Y Y++ +AL+Y H   G+ HRD+KP N++++    +L++ D+G A+   PG+     + SRY++ PEL+    +Y  ++DMWS GC+ A ++   +P F G    DQLV+I K+LGT   +E+      Y     PQ+ A        PW K  +      + PEA+D + +LL+Y    R TA EA AHP+F  +RA   S
Sbjct:  235 VQLYTYQICRALNYLHRVVGVCHRDIKPQNLLVNTHTHQLKICDFGSAKMLVPGEPNISYICSRYYRAPELIFGATEYTNAIDMWSGGCVMAELLL-GQPLFPGESGIDQLVEIIKILGTPTREEIRCMNPNYTEFKFPQIKA-------HPWHKIFH----KRMPPEAVDLVSRLLQYSPNLRCTALEACAHPFFDDLRAPNVS 427          
BLAST of CX298297 vs. ExPASy Swiss-Prot
Match: HOG1_USTMA (Mitogen-activated protein kinase HOG1 OS=Ustilago maydis GN=HOG1 PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.459e-29
Identity = 73/194 (37.63%), Postives = 120/194 (61.86%), Query Frame = 3
Query:   45 IRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWS-KFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFA 623
            I+Y++Y++L+ L Y HS G++HRD+KP N+++ +E   L++ D+GLA    P  +    V++RY++ PE+++  Q YD ++D+WS GC+FA M+  K P F G D+ +Q   I ++LGT   +  +     E   +    + +  R P+S KF NAD      P A+D L+K+L +D + R++A EA+AHPY A
Sbjct:  118 IQYFLYQILRGLKYVHSAGVVHRDLKPSNILV-NENCDLKICDFGLARIQDP--QMTGYVSTRYYRAPEIMLTWQKYDVAVDVWSAGCIFAEMLEGK-PLFPGKDHVNQFSIITELLGTPP-DEVIKTICSENTLRFVQSLPKRERVPFSQKFKNAD------PMALDLLEKMLVFDPRTRISAAEALAHPYLA 300          
BLAST of CX298297 vs. ExPASy Swiss-Prot
Match: GSK3A_RAT (Glycogen synthase kinase-3 alpha OS=Rattus norvegicus GN=Gsk3a PE=1 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.459e-29
Identity = 74/200 (37.00%), Postives = 111/200 (55.50%), Query Frame = 3
Query:   45 IRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTD--ELNAYLNKYHLELD-PQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQVRA 635
            ++ Y+Y+L ++L Y HSQG+ HRD+KP N+++D +   L+L D+G A+    G+     + SRY++ PEL+    DY  S+D+WS GC+ A ++   +P F G    DQLV+I KVLGT   E    +N  + E   PQ+ A        PW+K   +       PEAI     LL Y    RL+  EA AH +F ++R+
Sbjct:  221 VKVYMYQLFRSLAYIHSQGVCHRDIKPQNLLVDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLL-GQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKA-------HPWTKVFKS----RTPPEAIALCSSLLEYTPSSRLSPLEACAHSFFDELRS 408          
BLAST of CX298297 vs. ExPASy Swiss-Prot
Match: HOG1_CHAGB (Mitogen-activated protein kinase HOG1 OS=Chaetomium globosum GN=HOG1 PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.517e-29
Identity = 73/196 (37.24%), Postives = 120/196 (61.22%), Query Frame = 3
Query:   45 IRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT---DELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFA 623
            I+Y++Y++++ L Y HS G++HRD+KP N+++ +E   L++ D+GLA    P  +    V++RY++ PE+++  Q YD  +D+WS GC+FA M+  K P F G D+ +Q   I ++LGT   D +N   ++  L     + +L  R  +   +KF NAD      P AID L+++L +D + R+TA EA+AH Y A
Sbjct:  118 IQYFLYQIMRGLKYVHSAGVVHRDLKPSNILV-NENCDLKICDFGLARIQDP--QMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGK-PLFPGKDHVNQFSIITELLGTPPDDVINTIASENTLRF---VKSLPMRERQPLKNKFKNAD------PTAIDLLERMLVFDPKKRITATEALAHEYLA 300          
BLAST of CX298297 vs. ExPASy Swiss-Prot
Match: GSK3A_HUMAN (Glycogen synthase kinase-3 alpha OS=Homo sapiens GN=GSK3A PE=1 SV=2)

HSP 1 Score: 128.257 bits (321), Expect = 4.517e-29
Identity = 74/199 (37.19%), Postives = 110/199 (55.28%), Query Frame = 3
Query:   45 IRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTD--ELNAYLNKYHLELD-PQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQVR 632
            ++ Y+Y+L ++L Y HSQG+ HRD+KP N+++D +   L+L D+G A+    G+     + SRY++ PEL+    DY  S+D+WS GC+ A ++   +P F G    DQLV+I KVLGT   E    +N  + E   PQ+ A        PW+K   +       PEAI     LL Y    RL+  EA AH +F ++R
Sbjct:  221 VKVYMYQLFRSLAYIHSQGVCHRDIKPQNLLVDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLL-GQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKA-------HPWTKVFKS----RTPPEAIALCSSLLEYTPSSRLSPLEACAHSFFDELR 407          
BLAST of CX298297 vs. ExPASy Swiss-Prot
Match: MK12_DANRE (Mitogen-activated protein kinase 12 OS=Danio rerio GN=mapk12 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 5.899e-29
Identity = 74/207 (35.75%), Postives = 121/207 (58.45%), Query Frame = 3
Query:   30 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHL---VSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQVRAAE 641
            L++  ++Y +Y++LK L Y H+ GI+HRD+KP N+ I+ E  +L+++D+GLA       E    V +R+++ PE+++    Y  ++D+WS+GC+ A M+  K P F GHD+ DQL++I KV GT            E   +L +   R+      +F   D + L   V+P+AI  LD +L  D + R+TA EA+A P+F++ R  E
Sbjct:  123 LSEERVQYLVYQMLKGLKYIHAAGIIHRDLKPGNLAINEEC-ELKILDFGLAR--QTDSEMTGYVVTRWYRAPEVILSWMHYTQTVDIWSVGCIMAEMLLGK-PLFKGHDHLDQLMEIMKVTGTPS---------KEFTAKLQSEDARNYVTKLPRFRKKDLRILLPNVNPQAIKVLDGMLLLDPESRITAAEALAFPFFSEFREPE 316          
The following BLAST results are available for this feature:
BLAST of CX298297 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GSK3_DICDI4.086e-3036.00Glycogen synthase kinase-3 OS=Dictyostelium discoi... [more]
HOG1_WALIC6.969e-3035.81Mitogen-activated protein kinase HOG1 (Fragment) O... [more]
GSK3A_MOUSE1.552e-2937.69Glycogen synthase kinase-3 alpha OS=Mus musculus G... [more]
CKB21_ORYSJ1.552e-2932.65Cyclin-dependent kinase B2-1 OS=Oryza sativa subsp... [more]
KSGT_BRANA2.648e-2935.12Shaggy-related protein kinase theta OS=Brassica na... [more]
HOG1_USTMA3.459e-2937.63Mitogen-activated protein kinase HOG1 OS=Ustilago ... [more]
GSK3A_RAT3.459e-2937.00Glycogen synthase kinase-3 alpha OS=Rattus norvegi... [more]
HOG1_CHAGB4.517e-2937.24Mitogen-activated protein kinase HOG1 OS=Chaetomiu... [more]
GSK3A_HUMAN4.517e-2937.19Glycogen synthase kinase-3 alpha OS=Homo sapiens G... [more]
MK12_DANRE5.899e-2935.75Mitogen-activated protein kinase 12 OS=Danio rerio... [more]

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Properties
Property NameValue
Genbank descriptionC06010F11SK RindPdig24 Citrus clementina cDNA clone C06010F11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX298297 ID=CX298297; Name=CX298297; organism=Citrus clementina; type=EST; length=751bp
AGCACTGATTTAAAGTTTTGTACCCCACATTGACTGACTATGACATACGC
TATTACATATACGAGCTTCTGAAGGCATTAGATTACTGCCATTCACAGGG
AATAATGCATAGAGATGTCAAGCCTCACAATGTTATGATAGACCATGAGT
TGCGTAAACTTCGTTTGATTGACTGGGGTCTTGCTGAATTTTACCATCCT
GGCAAGGAGTATAATGTTCGTGTGGCTTCTAGATACTTCAAGGGACCAGA
ACTCCTTGTGGATTTACAGGACTATGACTACTCTTTAGATATGTGGAGCC
TTGGTTGCATGTTTGCAGGAATGATATTTCGGAAGGAGCCATTCTTTTAT
GGTCATGACAACCATGATCAGCTTGTCAAAATTGCCAAGGTACTGGGAAC
TGATGAGTTAAATGCATATCTGAACAAATATCATTTAGAGCTTGATCCTC
AACTCGATGCACTTGTTGGGAGGCACAGCCGGAAGCCATGGTCAAAATTT
ATTAATGCTGATAATCAGCATCTGGTTTCTCCAGAGGCAATAGATTTTCT
TGATAAGCTCCTCCGTTATGATCACCAGGATAGGCTAACTGCTAGGGAGG
CAATGGCCCATCCATATTTCGCACAAGTGAGGGCTGCTGAGAGTAGCAGG
ACCCGCGCATAGCAGCCTGCCTCATGGAGTTCCTATCCGAACTGAATTCC
TTATCATTGCTCAAATGATATGTATCGTGCTTATACTGTTTGATCAATTG
C
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