CX298308

Overview
NameCX298308
Unique NameCX298308
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length455
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX298308 vs. ExPASy Swiss-Prot
Match: C93A1_SOYBN (Cytochrome P450 93A1 OS=Glycine max GN=CYP93A1 PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 2.242e-36
Identity = 77/156 (49.36%), Postives = 104/156 (66.67%), Query Frame = 1
Query:    1 ARLELEQTIGKGKTIEESDITRLPYLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFL--GSN-LDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLEDEN--MDMEEKFG 453
            AR E++  +GK + +EESDI  LPYLQA+V+ETLRLHP  PL++ R++     + G+ +P   ++FVN WAIGRD   WE P  F PERF+  G N LD +G+++  IPFGSGRR CPG  LA +++ + L  +I  F WKL   N  +DMEEK G
Sbjct:  332 ARQEIDAVVGKSRMVEESDIANLPYLQAIVRETLRLHPGGPLVV-RESSKSAVVCGYDIPAKTRLFVNVWAIGRDPNHWEKPFEFRPERFIRDGQNQLDVRGQHYHFIPFGSGRRTCPGASLAWQVVPVNLAIIIQCFQWKLVGGNGKVDMEEKSG 486          
BLAST of CX298308 vs. ExPASy Swiss-Prot
Match: C71BQ_ARATH (Cytochrome P450 71B26 OS=Arabidopsis thaliana GN=CYP71B26 PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 2.242e-36
Identity = 74/152 (48.68%), Postives = 99/152 (65.13%), Query Frame = 1
Query:   10 ELEQTIGKGKTIEESDITRLPYLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLED----ENMDMEEKFG 453
            E+   I   + I   D  +L YL+ V+KET RLHP  PLLLPR  + + EI G+ +P   ++ VN WAIGRD  TW++P  F+PERF  SN+D KG+NFEL+ FGSGRRICPGL +   M+   L +++  FDWKL +    E++DMEE  G
Sbjct:  330 EIRNQIKNKERISFDDTDKLEYLKMVIKETWRLHPPTPLLLPRDVITEFEINGYTIPAKTRLHVNVWAIGRDPDTWKDPEMFLPERFNDSNIDAKGQNFELLSFGSGRRICPGLYMGTTMVEFGLANMLYHFDWKLPEGMVVEDIDMEEAPG 481          
BLAST of CX298308 vs. ExPASy Swiss-Prot
Match: C71BH_ARATH (Cytochrome P450 71B17 OS=Arabidopsis thaliana GN=CYP71B17 PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 2.242e-36
Identity = 70/150 (46.67%), Postives = 103/150 (68.67%), Query Frame = 1
Query:   10 ELEQTIGKGKT-IEESDITRLPYLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLED----ENMDMEE 444
            E+   +G  +  I + D+ ++P+L  V+KET RLHP  PLLLPR+ +A V++ G+ +P   ++ VNAWAIGRD   W +P  F PERF+ S +D++G++FEL+PFGSGRRICPG+ + +  L L L +L+  FDWKL D    +++D EE
Sbjct:  333 EIRDRLGNNRERITKEDLDKVPFLNLVIKETFRLHPVAPLLLPRETMAHVKVQGYDIPPKRRILVNAWAIGRDPKLWTDPEEFKPERFIDSPVDYRGQHFELLPFGSGRRICPGMAMGMATLELGLLNLLYFFDWKLPDGMSHKDIDTEE 482          
BLAST of CX298308 vs. ExPASy Swiss-Prot
Match: C75A7_EUSGR (Flavonoid 3',5'-hydroxylase OS=Eustoma grandiflorum GN=CYP75A7 PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 2.928e-36
Identity = 74/156 (47.44%), Postives = 104/156 (66.67%), Query Frame = 1
Query:    1 ARLELEQTIGKGKTIEESDITRLPYLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFL---GSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLEDE--NMDMEEKFG 453
            A+ E++  IG+ +   E+DI++LPYLQA+ KE  R HP+ PL LPR A    E+ G  +PKG ++ VN WAIGRD   WENP  F P+RFL    + +D +G +FELIPFG+GRRIC G  L I ++  +LG+L++SF W+L      ++M+E FG
Sbjct:  331 AQEEMDGVIGRDRRFLEADISKLPYLQAICKEAFRKHPSTPLNLPRIASQACEVNGHYIPKGTRLSVNIWAIGRDPSVWENPNEFNPDRFLERKNAKIDPRGNDFELIPFGAGRRICAGTRLGILLVEYILGTLVHSFVWELPSSVIELNMDESFG 486          
BLAST of CX298308 vs. ExPASy Swiss-Prot
Match: C71BU_ARATH (Cytochrome P450 71B31 OS=Arabidopsis thaliana GN=CYP71B31 PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 2.928e-36
Identity = 71/150 (47.33%), Postives = 104/150 (69.33%), Query Frame = 1
Query:   10 ELEQTIGKGKT-IEESDITRLPYLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLED----ENMDMEE 444
            E+  T+G  K  I E D+ ++ YL  V+KE+ RLHP  PLLLPR+ ++D+EI G+ +PK A V +N +AIGRD   W NP  F PERFL +++++KG+++EL+PFG+GRR CPG+ L I +L L L +++  FDW L      +++DMEE
Sbjct:  330 EIRATLGPNKERITEEDLEKVEYLNLVIKESFRLHPPAPLLLPRETMSDIEIQGYHIPKNAHVKINTYAIGRDPKRWTNPEEFNPERFLNTSINYKGQHYELLPFGAGRRNCPGMTLGITILELGLLNILYYFDWSLPSGMTIKDIDMEE 479          
BLAST of CX298308 vs. ExPASy Swiss-Prot
Match: C71BW_ARATH (Cytochrome P450 71B35 OS=Arabidopsis thaliana GN=CYP71B35 PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 8.520e-36
Identity = 70/152 (46.05%), Postives = 103/152 (67.76%), Query Frame = 1
Query:   10 ELEQTIGKGKTIEESDITRLPYLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKL----EDENMDMEEKFG 453
            E+   +G    I   D+ +L YL+ V+KET RLHP  PLLLPR+A+++ +I G+ +P   ++ VN WAIGRD  TW++P  F+PERF+ +N+D KG++FEL+PFG GRRICP + +   M+   L +L+  FDWKL    E +++D+EE  G
Sbjct:  329 EIRTQMGNRSMISFEDMDQLEYLKMVIKETWRLHPTTPLLLPREAMSEFDINGYTIPVKTRLHVNVWAIGRDPDTWKDPEVFLPERFMDNNIDAKGQHFELLPFGGGRRICPAIYMGTTMVEFGLANLLYHFDWKLPEGVEVKDIDVEEAPG 480          
BLAST of CX298308 vs. ExPASy Swiss-Prot
Match: C71B9_ARATH (Cytochrome P450 71B9 OS=Arabidopsis thaliana GN=CYP71B9 PE=2 SV=3)

HSP 1 Score: 148.673 bits (374), Expect = 1.113e-35
Identity = 73/149 (48.99%), Postives = 101/149 (67.79%), Query Frame = 1
Query:   19 QTIGKGKTIEESDITRLPYLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLED----ENMDMEEKFG 453
            Q I K   I   DI  LPYL+ V+KET RLHP VPLLLPR+ +++ EI G+ +     ++VN WAIGRD  +W++   F PERF+ +N+D KG+NFEL+PFGSGRRICPG+ +   M+   L +++  FDW++ D    E++DMEE  G
Sbjct:  334 QMINKS-VITLDDIDHLPYLKMVIKETWRLHPPVPLLLPREVMSEFEINGYKIQPKTLLYVNVWAIGRDPDSWKDADMFYPERFMDNNIDAKGQNFELLPFGSGRRICPGMYMGTTMVEFGLANMLYQFDWEVPDGMVVEDIDMEESPG 481          
BLAST of CX298308 vs. ExPASy Swiss-Prot
Match: C71BZ_ARATH (Cytochrome P450 71B38 OS=Arabidopsis thaliana GN=CYP71B38 PE=2 SV=2)

HSP 1 Score: 148.288 bits (373), Expect = 1.453e-35
Identity = 72/153 (47.06%), Postives = 103/153 (67.32%), Query Frame = 1
Query:   10 ELEQTIGKGKT-IEESDITRLPYLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLED----ENMDMEEKFG 453
            E+   +G  K  I E D+ ++ YL+ V+ ET RLHP  PLLLPR  ++D++I G+ +PK   + +N +AIGRD   W+ P  F+PERFL S +D+KG++FEL+PFG+GRRICPG+   I M+ L L +L+  FDW L +    E++DMEE  G
Sbjct:  330 EIRAMLGPNKERITEEDLEKVEYLKLVMVETFRLHPPAPLLLPRLTMSDIKIQGYNIPKNTMIQINTYAIGRDPKYWKQPGEFIPERFLDSPIDYKGQHFELLPFGAGRRICPGMATGITMVELGLLNLLYFFDWSLPNGMTIEDIDMEEDEG 482          
BLAST of CX298308 vs. ExPASy Swiss-Prot
Match: C71BT_ARATH (Cytochrome P450 71B29 OS=Arabidopsis thaliana GN=CYP71B29 PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 1.453e-35
Identity = 70/140 (50.00%), Postives = 96/140 (68.57%), Query Frame = 1
Query:   10 ELEQTIG-KGKTIEESDITRLPYLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLEDE 426
            E+  T+G K + I E D+T L Y + VVKE  RLHPAVP LLPR+ L+ V+I G+ +P   Q+ +N +AI RD   W NP  F P+RFL S++D+KG NFEL+PFGSGRRICPG+ + I ++   L +L+  FDW L ++
Sbjct:  329 EIRTTLGDKKERITEQDLTNLHYFKLVVKEIFRLHPAVPFLLPRETLSHVKIQGYDIPAKTQIMINVYAIARDPKLWTNPDEFNPDRFLDSSIDYKGLNFELLPFGSGRRICPGMTMGITLVEFALLNLLYFFDWGLPEK 468          
BLAST of CX298308 vs. ExPASy Swiss-Prot
Match: C84A1_ARATH (Cytochrome P450 84A1 OS=Arabidopsis thaliana GN=CYP84A1 PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 1.898e-35
Identity = 74/153 (48.37%), Postives = 100/153 (65.36%), Query Frame = 1
Query:   10 ELEQTIGKGKTIEESDITRLPYLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNL-DFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLED----ENMDMEEKFG 453
            EL + +G  + +EESDI +L YL+  +KETLR+HP +PLLL   A  D  I GF +PK ++V +NA+AIGRD  +W +P +F P RFL   + DFKG NFE IPFGSGRR CPG+ L +  L L +  +++ F WKL D      +DM + FG
Sbjct:  348 ELAEVVGLDRRVEESDIEKLTYLKCTLKETLRMHPPIPLLLHETA-EDTSIDGFFIPKKSRVMINAFAIGRDPTSWTDPDTFRPSRFLEPGVPDFKGSNFEFIPFGSGRRSCPGMQLGLYALDLAVAHILHCFTWKLPDGMKPSELDMNDVFG 499          
The following BLAST results are available for this feature:
BLAST of CX298308 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 494
Match NameE-valueIdentityDescription
C93A1_SOYBN2.242e-3649.36Cytochrome P450 93A1 OS=Glycine max GN=CYP93A1 PE=... [more]
C71BQ_ARATH2.242e-3648.68Cytochrome P450 71B26 OS=Arabidopsis thaliana GN=C... [more]
C71BH_ARATH2.242e-3646.67Cytochrome P450 71B17 OS=Arabidopsis thaliana GN=C... [more]
C75A7_EUSGR2.928e-3647.44Flavonoid 3',5'-hydroxylase OS=Eustoma grandifloru... [more]
C71BU_ARATH2.928e-3647.33Cytochrome P450 71B31 OS=Arabidopsis thaliana GN=C... [more]
C71BW_ARATH8.520e-3646.05Cytochrome P450 71B35 OS=Arabidopsis thaliana GN=C... [more]
C71B9_ARATH1.113e-3548.99Cytochrome P450 71B9 OS=Arabidopsis thaliana GN=CY... [more]
C71BZ_ARATH1.453e-3547.06Cytochrome P450 71B38 OS=Arabidopsis thaliana GN=C... [more]
C71BT_ARATH1.453e-3550.00Cytochrome P450 71B29 OS=Arabidopsis thaliana GN=C... [more]
C84A1_ARATH1.898e-3548.37Cytochrome P450 84A1 OS=Arabidopsis thaliana GN=CY... [more]

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Properties
Property NameValue
Genbank descriptionC06010G10SK RindPdig24 Citrus clementina cDNA clone C06010G10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX298308 ID=CX298308; Name=CX298308; organism=Citrus clementina; type=EST; length=455bp
GCAAGATTAGAGTTAGAACAAACGATTGGTAAAGGCAAAACAATTGAGGA
ATCAGACATCACTCGGTTACCTTATCTACAAGCAGTAGTCAAAGAAACCT
TGAGGCTGCACCCAGCAGTTCCCTTGTTACTTCCTCGTAAAGCTTTAGCC
GACGTAGAAATTGCGGGCTTCATAGTTCCAAAAGGAGCACAGGTTTTTGT
TAATGCGTGGGCAATTGGCAGAGATGAACTCACATGGGAGAACCCTCTTT
CTTTTATGCCTGAGAGATTCTTGGGGTCAAATCTCGATTTCAAAGGCAGA
AACTTTGAGCTGATCCCCTTTGGATCTGGCCGGCGAATATGTCCTGGTTT
GCCGTTGGCAATTAGAATGTTACATCTAATGTTGGGTTCACTCATTAACT
CCTTTGATTGGAAGCTGGAAGATGAGAACATGGATATGGAAGAAAAATTT
GGCAT
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