CX298308

Overview
NameCX298308
Unique NameCX298308
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length455
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX298308 vs. ExPASy Swiss-Prot
Match: C71AE_ARATH (Cytochrome P450 71A14 OS=Arabidopsis thaliana GN=CYP71A14 PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 4.675e-34
Identity = 68/142 (47.89%), Postives = 96/142 (67.61%), Query Frame = 1
Query:   43 IEESDITRLPYLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWE-NPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLE----DENMDMEEKFG 453
            I E D+  + YL+AVVKE LRLHP +PLL+PR+   D+++ G+ +  G QV +NAWAI RD +TW  +   F PER L S +DF+G NFE IPFGSGRRICPG+  A+ ++ + L +L+N F+W++E     +  D+ E  G
Sbjct:  340 ISEEDVEDMKYLKAVVKEVLRLHPPLPLLVPRELSEDIKLKGYDIAAGTQVIINAWAIQRDTMTWGIDAEEFRPERHLDSLVDFRGTNFEFIPFGSGRRICPGIGFAMALVEVTLANLVNRFNWRMEVQHSGDEYDLAESTG 481          
BLAST of CX298308 vs. ExPASy Swiss-Prot
Match: C71A2_SOLME (Cytochrome P450 71A2 OS=Solanum melongena GN=CYP71A2 PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 4.675e-34
Identity = 72/150 (48.00%), Postives = 102/150 (68.00%), Query Frame = 1
Query:   25 IGKGKT-IEESDITRLPYLQAVVKETLRLHPAVP-LLLPRKALADVEIAGFI-VPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLED----ENMDMEEKFG 453
            + +GK+ I E D+  + YL+AV+KE+LRLHP    LL+PR+++ DV + G+  +P   Q  +NAWAIGRD L+WENP  + PERFL S+ D KG NF+L+PFG+GRR CPG   AI ++ L L  L++ FD+ L +    E++DM E  G
Sbjct:  340 LAQGKSEITEDDLKNMQYLRAVIKESLRLHPTQESLLVPRESMEDVNLLGYYHIPARTQAIINAWAIGRDPLSWENPEEYQPERFLNSDADVKGLNFKLLPFGAGRRGCPGSSFAIAVIELALARLVHKFDFALPEGIKPEDLDMTETIG 489          
BLAST of CX298308 vs. ExPASy Swiss-Prot
Match: C93B1_GLYEC (Licodione synthase OS=Glycyrrhiza echinata GN=CYP93B1 PE=1 SV=2)

HSP 1 Score: 142.51 bits (358), Expect = 7.974e-34
Identity = 64/142 (45.07%), Postives = 100/142 (70.42%), Query Frame = 1
Query:    4 RLELEQTIGKGKTIEESDITRLPYLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFL------GSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDW 411
            R E++  +GK + +EESD   LPYLQA++KET RLHP VP ++ R+ +A+  +  +++P+ + +FVN W+IGR+   W+NPL F PERFL         +D +G +F+L+PFGSGRR+CPG+ LA++ +  +LG++I  FD+
Sbjct:  331 REEIDNVVGKDRLVEESDCPNLPYLQAILKETFRLHPPVP-MVTRRCVAECTVENYVIPEDSLLFVNVWSIGRNPKFWDNPLEFRPERFLKLEGDSSGVVDVRGSHFQLLPFGSGRRMCPGVSLAMQEVPALLGAIIQCFDF 471          
BLAST of CX298308 vs. ExPASy Swiss-Prot
Match: C71D7_SOLCH (Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71D7 PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 7.974e-34
Identity = 67/155 (43.23%), Postives = 98/155 (63.23%), Query Frame = 1
Query:    1 ARLELEQTIGKGKTIEESDITRLPYLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKL----EDENMDMEEKFG 453
            A+ ++ +      T +E+D+  L YL+ V+KET+RLH  VPLL+PR+   + EI G+ +P   +V VN WA+GRD   W++  SF PERF   ++DF G NFE +PFG GRRICPG+   +  ++L L  L+  FDWKL    E +++D+ E  G
Sbjct:  328 AQAKVREAFRDKVTFDENDVEELKYLKLVIKETMRLHAPVPLLVPRECREETEINGYTIPVKTKVMVNVWALGRDPKYWDDAESFKPERFEQCSIDFIGNNFEYLPFGGGRRICPGISFGLANVYLPLAQLLYHFDWKLPTGMEPKDLDLTESAG 482          
BLAST of CX298308 vs. ExPASy Swiss-Prot
Match: C71B1_THLAR (Cytochrome P450 71B1 OS=Thlaspi arvense GN=CYP71B1 PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 1.042e-33
Identity = 66/152 (43.42%), Postives = 100/152 (65.79%), Query Frame = 1
Query:   10 ELEQTIGKGKTIEESDITRLPYLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLED----ENMDMEEKFG 453
            E+ + I     I + D+ +L Y + V+KET R+ P VP+L+PR A  D++IAG+ VP+   + VN WA+      W++P +F PERF+ +  DFKG NFEL+PFGSGRR+CPG+ + + ++HL L +L+  FDWKL +    E + +EE +G
Sbjct:  326 EIREKIKNIDEITDDDVEQLDYFKLVLKETFRISPIVPVLVPRVAAKDLKIAGYDVPEKTWIHVNMWAVHMSPSIWKDPETFNPERFIDNQTDFKGLNFELLPFGSGRRMCPGMGMGLAVVHLTLINLLYRFDWKLPNGMKAEELSIEENYG 477          
BLAST of CX298308 vs. ExPASy Swiss-Prot
Match: C71A9_SOYBN (Cytochrome P450 71A9 OS=Glycine max GN=CYP71A9 PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 1.042e-33
Identity = 70/155 (45.16%), Postives = 103/155 (66.45%), Query Frame = 1
Query:    1 ARLELEQTIGKGKTIEESDITRLPYLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLE----DENMDMEEKFG 453
            A+ E+   +   + +EE D+++L Y+++VVKE LRLHP  PLL+PR+   +  I GF +P   +V VNA +I  D   WENP  F+PERFL S +DFKG++FE++PFG GRR CPG+  A+ ++ L L +L+  FDW+L      +++DMEE  G
Sbjct:  327 AQEEVRDLVTGKEMVEEIDLSKLLYIKSVVKEVLRLHPPAPLLVPREITENCTIKGFEIPAKTRVLVNAKSIAMDPCCWENPNEFLPERFLVSPIDFKGQHFEMLPFGVGRRGCPGVNFAMPVVELALANLLFRFDWELPLGLGIQDLDMEEAIG 481          
BLAST of CX298308 vs. ExPASy Swiss-Prot
Match: C81F1_ARATH (Cytochrome P450 81F1 OS=Arabidopsis thaliana GN=CYP81F1 PE=2 SV=2)

HSP 1 Score: 140.584 bits (353), Expect = 3.030e-33
Identity = 75/153 (49.02%), Postives = 98/153 (64.05%), Query Frame = 1
Query:    1 ARLELEQTIGKGKTIEESDITRLPYLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFL-GSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWK-LEDENMDMEEKFG 453
            AR E+++ IGK + I+ESDI  LPYLQ VV ET RL P  P L+PR    D++I G+ VP+   V VNAWAI RD   WE P  F P+R+  G   D+    ++L+PFG+GRR CPG  L  R++ L LGSLI  F+W+ ++ E MDM E  G
Sbjct:  326 ARSEIDEKIGKDRLIDESDIAVLPYLQNVVSETFRLFPVAPFLIPRSPTDDMKIGGYDVPRDTIVMVNAWAIHRDPEIWEEPEKFNPDRYNDGCGSDY--YVYKLMPFGNGRRTCPGAGLGQRIVTLALGSLIQCFEWENVKGEEMDMSESTG 476          
BLAST of CX298308 vs. ExPASy Swiss-Prot
Match: C71B7_ARATH (Cytochrome P450 71B7 OS=Arabidopsis thaliana GN=CYP71B7 PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 3.958e-33
Identity = 66/135 (48.89%), Postives = 94/135 (69.63%), Query Frame = 1
Query:   10 ELEQTIG-KGKTIEESDITRLPYLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDW 411
            E+  T+G K + I E D++++ Y + VVKE  RLHPA PLLLPR+ ++ V+I G+ +P   Q+ +N ++I RD   W NP  F P+RFL S++D++G NFEL+PFGSGRRICPG+ L I  + L L +L+  FDW
Sbjct:  335 EIRTTLGDKKQRITEQDLSQVHYFKLVVKEIFRLHPAAPLLLPRETMSHVKIQGYDIPVKTQMMINIYSIARDPKLWTNPDEFNPDRFLDSSIDYRGLNFELLPFGSGRRICPGMTLGITTVELGLLNLLYFFDW 469          
BLAST of CX298308 vs. ExPASy Swiss-Prot
Match: C71B5_ARATH (Cytochrome P450 71B5 OS=Arabidopsis thaliana GN=CYP71B5 PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 3.958e-33
Identity = 64/150 (42.67%), Postives = 99/150 (66.00%), Query Frame = 1
Query:   10 ELEQTIGKGKT-IEESDITRLPYLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLED----ENMDMEE 444
            E+   +G  K  I E D+ ++ YL+ V++E  RLHP  PLLLPR  ++D+ I G+ +PK   + +N + IGRD   W  P  F+PERF+ + +++KG++FEL+PFG+GRR+CPG+   I ++ L L SL+  FDW L +    +++DMEE
Sbjct:  328 EIRAALGPNKEKITEEDLEKVEYLKMVIEEAFRLHPPAPLLLPRLTMSDINIQGYSIPKNTMIQINTYTIGRDPKNWTKPDEFIPERFVDNPIEYKGQHFELLPFGAGRRVCPGMATGITIVELGLLSLLYFFDWSLPNGMTTKDIDMEE 477          
BLAST of CX298308 vs. ExPASy Swiss-Prot
Match: C71AQ_ARATH (Cytochrome P450 71A26 OS=Arabidopsis thaliana GN=CYP71A26 PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 5.169e-33
Identity = 68/147 (46.26%), Postives = 102/147 (69.39%), Query Frame = 1
Query:    4 RLELE-QTIGKGKT-IEESDITRLPYLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPL-SFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLEDENMD 435
            RL+ E +TI K K+ + E +I  + YL+AV+KE LRLHP +PL++P ++  DV +    +P G QV +NAWAIGR+  TW   +  F PER L S++D++G+ FELIPFGSGRRICP +  A+ +  ++L +L++ FDW+L  E+ +
Sbjct:  316 RLQEEVRTICKDKSSVSEEEIQNMSYLKAVIKEALRLHPPLPLMVPHESTQDVRLGDHHIPAGTQVLINAWAIGREAATWGPDVEEFRPERHLDSSVDYRGQAFELIPFGSGRRICPAISFAVVLNEVVLANLVHRFDWRLSVESTE 462          
The following BLAST results are available for this feature:
BLAST of CX298308 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 494
Match NameE-valueIdentityDescription
C71AE_ARATH4.675e-3447.89Cytochrome P450 71A14 OS=Arabidopsis thaliana GN=C... [more]
C71A2_SOLME4.675e-3448.00Cytochrome P450 71A2 OS=Solanum melongena GN=CYP71... [more]
C93B1_GLYEC7.974e-3445.07Licodione synthase OS=Glycyrrhiza echinata GN=CYP9... [more]
C71D7_SOLCH7.974e-3443.23Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71... [more]
C71B1_THLAR1.042e-3343.42Cytochrome P450 71B1 OS=Thlaspi arvense GN=CYP71B1... [more]
C71A9_SOYBN1.042e-3345.16Cytochrome P450 71A9 OS=Glycine max GN=CYP71A9 PE=... [more]
C81F1_ARATH3.030e-3349.02Cytochrome P450 81F1 OS=Arabidopsis thaliana GN=CY... [more]
C71B7_ARATH3.958e-3348.89Cytochrome P450 71B7 OS=Arabidopsis thaliana GN=CY... [more]
C71B5_ARATH3.958e-3342.67Cytochrome P450 71B5 OS=Arabidopsis thaliana GN=CY... [more]
C71AQ_ARATH5.169e-3346.26Cytochrome P450 71A26 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionC06010G10SK RindPdig24 Citrus clementina cDNA clone C06010G10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX298308 ID=CX298308; Name=CX298308; organism=Citrus clementina; type=EST; length=455bp
GCAAGATTAGAGTTAGAACAAACGATTGGTAAAGGCAAAACAATTGAGGA
ATCAGACATCACTCGGTTACCTTATCTACAAGCAGTAGTCAAAGAAACCT
TGAGGCTGCACCCAGCAGTTCCCTTGTTACTTCCTCGTAAAGCTTTAGCC
GACGTAGAAATTGCGGGCTTCATAGTTCCAAAAGGAGCACAGGTTTTTGT
TAATGCGTGGGCAATTGGCAGAGATGAACTCACATGGGAGAACCCTCTTT
CTTTTATGCCTGAGAGATTCTTGGGGTCAAATCTCGATTTCAAAGGCAGA
AACTTTGAGCTGATCCCCTTTGGATCTGGCCGGCGAATATGTCCTGGTTT
GCCGTTGGCAATTAGAATGTTACATCTAATGTTGGGTTCACTCATTAACT
CCTTTGATTGGAAGCTGGAAGATGAGAACATGGATATGGAAGAAAAATTT
GGCAT
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