CX298308

Overview
NameCX298308
Unique NameCX298308
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length455
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX298308 vs. ExPASy Swiss-Prot
Match: C71DI_MENSP (Cytochrome P450 71D18 OS=Mentha spicata GN=CYP71D18 PE=1 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 6.751e-33
Identity = 69/146 (47.26%), Postives = 97/146 (66.44%), Query Frame = 1
Query:   31 KGKTIEE-SDITRLPYLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKL----EDENMDMEEKFG 453
            KGKT+ + S++  L YL++V+KETLRLHP  PL+ PR++  + E+ G+ +P   ++F+N WAIGRD   WE+P +F PERF   + DF G +FE IPFG+GRRICPGL   +  + + L  L+  FDWKL     D ++DM E  G
Sbjct:  333 KGKTVVDLSEVQELKYLRSVLKETLRLHPPFPLI-PRQSREECEVNGYTIPAKTRIFINVWAIGRDPQYWEDPDTFRPERFDEVSRDFMGNDFEFIPFGAGRRICPGLHFGLANVEIPLAQLLYHFDWKLPQGMTDADLDMTETPG 477          
BLAST of CX298308 vs. ExPASy Swiss-Prot
Match: C71DI_MENGR (Cytochrome P450 71D18 OS=Mentha gracilis GN=CYP71D18 PE=1 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 6.751e-33
Identity = 69/146 (47.26%), Postives = 97/146 (66.44%), Query Frame = 1
Query:   31 KGKTIEE-SDITRLPYLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKL----EDENMDMEEKFG 453
            KGKT+ + S++  L YL++V+KETLRLHP  PL+ PR++  + E+ G+ +P   ++F+N WAIGRD   WE+P +F PERF   + DF G +FE IPFG+GRRICPGL   +  + + L  L+  FDWKL     D ++DM E  G
Sbjct:  333 KGKTVVDLSEVQELKYLRSVLKETLRLHPPFPLI-PRQSREECEVNGYTIPAKTRIFINVWAIGRDPQYWEDPDTFRPERFDEVSRDFMGNDFEFIPFGAGRRICPGLHFGLANVEIPLAQLLYHFDWKLPQGMTDADLDMTETPG 477          
BLAST of CX298308 vs. ExPASy Swiss-Prot
Match: C71D8_SOYBN (Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 1.504e-32
Identity = 68/155 (43.87%), Postives = 99/155 (63.87%), Query Frame = 1
Query:    1 ARLELEQTIGKGKTIEESDITRLPYLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDW----KLEDENMDMEEKFG 453
            A+ EL Q     + I E+D+  L YL++V+KETLRLHP   L+ PR+ +    I G+ +P   +V +N WAIGRD   W +   F+PERF  S++DFKG +FE IPFG+GRR+CPG+   +  + L L  L+  F+W    K++ E++DM+E FG
Sbjct:  332 AQAELRQIFKGKEIIRETDLEELSYLKSVIKETLRLHPPSQLI-PRECIISTNIDGYEIPIKTKVMINTWAIGRDPQYWSDADRFIPERFNDSSIDFKGNSFEYIPFGAGRRMCPGMTFGLASITLPLALLLYHFNWELPNKMKPEDLDMDEHFG 485          
BLAST of CX298308 vs. ExPASy Swiss-Prot
Match: C71C1_MAIZE (Cytochrome P450 71C1 OS=Zea mays GN=CYP71C1 PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 3.350e-32
Identity = 64/158 (40.51%), Postives = 95/158 (60.13%), Query Frame = 1
Query:   10 ELEQTIGKGKTIEESDITRLPYLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFL----GSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLEDE------NMDMEEKFG 453
            E+      G+ + E D++R+PYL+A +KE++R+HP  P LLP  +  D EI G+ +P G +V VNAWA+ RD   W+    F PERFL     + +D  G++   +PFG+GRRIC G   AI  + +ML +LI  FDW++  E       +DM ++FG
Sbjct:  356 EVRTATPDGRMVMEEDLSRMPYLKATIKESMRIHPPAPFLLPHFSTHDCEINGYTIPAGTRVIVNAWALARDPTCWDKAEEFFPERFLEQGRDAEVDMYGKDIRFVPFGAGRRICAGATFAIATVEIMLANLIYHFDWEMPAEMERTGAKVDMSDQFG 513          
BLAST of CX298308 vs. ExPASy Swiss-Prot
Match: C71BA_ARATH (Cytochrome P450 71B10 OS=Arabidopsis thaliana GN=CYP71B10 PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 3.350e-32
Identity = 66/155 (42.58%), Postives = 99/155 (63.87%), Query Frame = 1
Query:   10 ELEQTIGKG---KTIEESDITRLPYLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLED----ENMDMEEKFG 453
            E+   IGK    + I   +I  L YL  V+KET RLHP  PLL+PR+ +++ +I G+ +    ++ VN WAIGRD   W++P  F+PERF+  ++D KG+++EL+PFGSGRRICP + + I  +   L +L+  FDWKL +    E++ M+E  G
Sbjct:  330 EIRAQIGKNNKTRIISLDEINHLSYLNMVIKETCRLHPVAPLLVPREVISEFKINGYTIQPKTRLHVNVWAIGRDPEIWKDPEEFLPERFMDCDIDVKGQDYELLPFGSGRRICPAVYMGITTVEFGLANLLYHFDWKLPEGVAVEDIYMDEASG 484          
BLAST of CX298308 vs. ExPASy Swiss-Prot
Match: C82A1_PEA (Cytochrome P450 82A1 (Fragment) OS=Pisum sativum GN=CYP82A1 PE=2 SV=2)

HSP 1 Score: 136.732 bits (343), Expect = 4.376e-32
Identity = 63/135 (46.67%), Postives = 90/135 (66.67%), Query Frame = 1
Query:   10 ELEQTIGKGKTIEESDITRLPYLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGS--NLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFD 408
            EL   IGK + + ESDI +L YL A++KETLRL+P  P   PR+   D  I G+ + KG ++  N W I RD   W +PL F PERFL +  ++D +G+NFEL+PFGSGRR+C G+ L + M+H +L + ++SF+
Sbjct:  369 ELNTYIGKERCVNESDINKLVYLHAIIKETLRLYPPAPFSSPREFTEDCTIGGYHIKKGTRLMPNLWKIHRDPSVWPDPLEFKPERFLSTHKDVDVRGQNFELLPFGSGRRMCAGMSLGLHMVHYILANFLHSFE 503          
BLAST of CX298308 vs. ExPASy Swiss-Prot
Match: C71D6_SOLCH (Cytochrome P450 71D6 OS=Solanum chacoense GN=CYP71D6 PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 4.376e-32
Identity = 66/155 (42.58%), Postives = 95/155 (61.29%), Query Frame = 1
Query:    1 ARLELEQTIGKGKTIEESDITRLPYLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKL----EDENMDMEEKFG 453
            A+ E+ +      T +E+D+  L YL+ V+KET+RLH  +PLL+PR+   + EI G+ +P   +V VN WA+GRD   W++   F PERF   ++DF G NFE +PFG GRRICPG    +   +L L  L+  FDWKL    E +++D+ E  G
Sbjct:  329 AQAEVREAFRNKVTFDENDVEDLKYLKLVIKETMRLHAPIPLLVPRECRKETEINGYTIPVKTKVMVNVWALGRDPKYWDDVECFKPERFEQCSIDFIGNNFEYLPFGGGRRICPGTSFGLANDYLPLAQLLCHFDWKLPTGMEPKDLDLTELAG 483          
BLAST of CX298308 vs. ExPASy Swiss-Prot
Match: C82A4_SOYBN (Cytochrome P450 82A4 OS=Glycine max GN=CYP82A4 PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 5.715e-32
Identity = 69/153 (45.10%), Postives = 97/153 (63.40%), Query Frame = 1
Query:    4 RLELEQTIGKGKTIEESDITRLPYLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGS--NLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFD-WKLEDENMDMEEKFG 453
            + EL+  +GK + I ESDI+ L YLQAVVKETLRL+   PL  PR+   D  + G+ V KG ++  N W I  D   W +P  F P+RFL +  ++D KG +F+L+PFGSGRR+CPG+   ++ +HL L S ++SF+      E +DM E FG
Sbjct:  348 KAELDIQVGKDRCICESDISNLVYLQAVVKETLRLYAPGPLSSPREFAEDCTLGGYHVKKGTRLITNIWKIHTDPNVWSDPFEFKPDRFLTTHKDIDVKGHHFQLLPFGSGRRVCPGISFGLQTVHLALASFLHSFEILNPSTEPLDMTEAFG 500          
BLAST of CX298308 vs. ExPASy Swiss-Prot
Match: C7D94_MENGR (Cytochrome P450 71D94 OS=Mentha gracilis GN=CYP71D94 PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 5.715e-32
Identity = 66/138 (47.83%), Postives = 93/138 (67.39%), Query Frame = 1
Query:   31 KGKT-IEESDITRLPYLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLEDENMDME 441
            KGKT ++ S++  L Y+++VVKETLRLHP  PL+ PR++  + EI GF +P   ++ +NAW+IGRD L WE+P +F PERF   + DF G +FE IPFG+G+RICPGL   +  + + L  L+  FDWKL     D +
Sbjct:  331 KGKTSVDLSEMQELKYMRSVVKETLRLHPPFPLI-PRQSREECEINGFYIPARTRILINAWSIGRDPLYWEDPDTFRPERFDEVSRDFMGNDFEFIPFGAGQRICPGLHFGLANVEIPLAQLLYHFDWKLPQGMTDAD 467          
BLAST of CX298308 vs. ExPASy Swiss-Prot
Match: C81D1_ARATH (Cytochrome P450 81D1 OS=Arabidopsis thaliana GN=CYP81D1 PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 7.464e-32
Identity = 71/152 (46.71%), Postives = 100/152 (65.79%), Query Frame = 1
Query:    1 ARLELEQTIGKGKTIEESDITRLPYLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDW-KLEDENMDMEEKFG 453
            AR E++  +G  + IEE+D++ LPYL+ +V ETLRLHPA PLL+P  A  D +I  + +P+G  + VNAWAI RD  TW++P SF PERF     + +    +L+ FG GRR CPG  LA R++ L LGSLI  F+W ++ +  +DM+E  G
Sbjct:  332 ARDEIDNRVGLDRLIEEADLSELPYLKNIVLETLRLHPATPLLVPHMASEDCKIGSYDMPRGTTLLVNAWAIHRDPNTWDDPDSFKPERF-----EKEEEAQKLLAFGLGRRACPGSGLAQRIVGLALGSLIQCFEWERVGNVEVDMKEGVG 478          
The following BLAST results are available for this feature:
BLAST of CX298308 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 494
Match NameE-valueIdentityDescription
C71DI_MENSP6.751e-3347.26Cytochrome P450 71D18 OS=Mentha spicata GN=CYP71D1... [more]
C71DI_MENGR6.751e-3347.26Cytochrome P450 71D18 OS=Mentha gracilis GN=CYP71D... [more]
C71D8_SOYBN1.504e-3243.87Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=... [more]
C71C1_MAIZE3.350e-3240.51Cytochrome P450 71C1 OS=Zea mays GN=CYP71C1 PE=2 S... [more]
C71BA_ARATH3.350e-3242.58Cytochrome P450 71B10 OS=Arabidopsis thaliana GN=C... [more]
C82A1_PEA4.376e-3246.67Cytochrome P450 82A1 (Fragment) OS=Pisum sativum G... [more]
C71D6_SOLCH4.376e-3242.58Cytochrome P450 71D6 OS=Solanum chacoense GN=CYP71... [more]
C82A4_SOYBN5.715e-3245.10Cytochrome P450 82A4 OS=Glycine max GN=CYP82A4 PE=... [more]
C7D94_MENGR5.715e-3247.83Cytochrome P450 71D94 OS=Mentha gracilis GN=CYP71D... [more]
C81D1_ARATH7.464e-3246.71Cytochrome P450 81D1 OS=Arabidopsis thaliana GN=CY... [more]

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Properties
Property NameValue
Genbank descriptionC06010G10SK RindPdig24 Citrus clementina cDNA clone C06010G10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX298308 ID=CX298308; Name=CX298308; organism=Citrus clementina; type=EST; length=455bp
GCAAGATTAGAGTTAGAACAAACGATTGGTAAAGGCAAAACAATTGAGGA
ATCAGACATCACTCGGTTACCTTATCTACAAGCAGTAGTCAAAGAAACCT
TGAGGCTGCACCCAGCAGTTCCCTTGTTACTTCCTCGTAAAGCTTTAGCC
GACGTAGAAATTGCGGGCTTCATAGTTCCAAAAGGAGCACAGGTTTTTGT
TAATGCGTGGGCAATTGGCAGAGATGAACTCACATGGGAGAACCCTCTTT
CTTTTATGCCTGAGAGATTCTTGGGGTCAAATCTCGATTTCAAAGGCAGA
AACTTTGAGCTGATCCCCTTTGGATCTGGCCGGCGAATATGTCCTGGTTT
GCCGTTGGCAATTAGAATGTTACATCTAATGTTGGGTTCACTCATTAACT
CCTTTGATTGGAAGCTGGAAGATGAGAACATGGATATGGAAGAAAAATTT
GGCAT
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