CX298308

Overview
NameCX298308
Unique NameCX298308
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length455
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX298308 vs. ExPASy Swiss-Prot
Match: C7D95_MENSP (Cytochrome P450 71D95 OS=Mentha spicata GN=CYP71D95 PE=1 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 7.464e-32
Identity = 65/146 (44.52%), Postives = 95/146 (65.07%), Query Frame = 1
Query:   31 KGKT-IEESDITRLPYLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLED----ENMDMEEKFG 453
            KGKT ++  D+  L Y+++VVKET+R+HP +PL+ PR    + E+ G+ +P  A++ +N W++GR+ L WE P +F PERF   + DF G +FE IPFG+GRRICPGL   +  + + L  L+  FDWKL +     +MDM E  G
Sbjct:  333 KGKTSVDVDDVQELKYMKSVVKETMRMHPPIPLI-PRSCREECEVNGYKIPNKARIMINVWSMGRNPLYWEKPETFWPERFDQVSRDFMGSDFEFIPFGAGRRICPGLNFGLANVEVPLAQLLYHFDWKLAEGMKPSDMDMSEAEG 477          
BLAST of CX298308 vs. ExPASy Swiss-Prot
Match: C7D95_MENGR (Cytochrome P450 71D95 OS=Mentha gracilis GN=CYP71D95 PE=1 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 7.464e-32
Identity = 65/146 (44.52%), Postives = 95/146 (65.07%), Query Frame = 1
Query:   31 KGKT-IEESDITRLPYLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLED----ENMDMEEKFG 453
            KGKT ++  D+  L Y+++VVKET+R+HP +PL+ PR    + E+ G+ +P  A++ +N W++GR+ L WE P +F PERF   + DF G +FE IPFG+GRRICPGL   +  + + L  L+  FDWKL +     +MDM E  G
Sbjct:  333 KGKTSVDVDDVQELKYMKSVVKETMRMHPPIPLI-PRSCREECEVNGYKIPNKARIMINVWSMGRNPLYWEKPETFWPERFDQVSRDFMGSDFEFIPFGAGRRICPGLNFGLANVEVPLAQLLYHFDWKLAEGMKPSDMDMSEAEG 477          
BLAST of CX298308 vs. ExPASy Swiss-Prot
Match: C82A2_SOYBN (Cytochrome P450 82A2 OS=Glycine max GN=CYP82A2 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 9.748e-32
Identity = 71/152 (46.71%), Postives = 97/152 (63.82%), Query Frame = 1
Query:    4 RLELEQTIGKGKTIEESDITRLPYLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFL--GSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFD-WKLEDENMDMEEKF 450
            + EL+  +GK + I ESD+++L YLQAVVKETLRL+P  PL  PR+   D  I G+ V KG ++  N   I  D   W NPL F PERFL    ++D KG++F+L+PFG GRRICPG+ L ++ + L L S ++SF+      E +DM E F
Sbjct:  345 KAELDIQVGKERYICESDLSKLTYLQAVVKETLRLYPPAPLSRPREFEEDCTIGGYTVKKGTRLITNLSKIHTDHNVWSNPLEFKPERFLTTDKDIDMKGQHFQLLPFGGGRRICPGINLGLQTVRLTLASFLHSFEILNPSTEPLDMTEVF 496          
BLAST of CX298308 vs. ExPASy Swiss-Prot
Match: C71AD_ARATH (Cytochrome P450 71A13 OS=Arabidopsis thaliana GN=CYP71A13 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 9.748e-32
Identity = 66/154 (42.86%), Postives = 97/154 (62.99%), Query Frame = 1
Query:   10 ELEQTIGK-GKTIEESDITRLPYLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTW-ENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLE----DENMDMEEKFG 453
            E+  TI   G  I+E ++  + YL+AV+KE LRLHP++P++LPR    DV++ G+ +  G +V +NAWAI RD   W  +   F PER L S LD+ G+N   IPFGSGRRICPG+ LA+ +  + + +L+  FDW++E     +  D+ E  G
Sbjct:  327 EIRSTIRPHGSYIKEKEVENMKYLKAVIKEVLRLHPSLPMILPRLLSEDVKVKGYNIAAGTEVIINAWAIQRDTAIWGPDAEEFKPERHLDSGLDYHGKNLNYIPFGSGRRICPGINLALGLAEVTVANLVGRFDWRVEAGPNGDQPDLTEAIG 480          
BLAST of CX298308 vs. ExPASy Swiss-Prot
Match: C71AO_ARATH (Cytochrome P450 71A24 OS=Arabidopsis thaliana GN=CYP71A24 PE=2 SV=3)

HSP 1 Score: 135.191 bits (339), Expect = 1.273e-31
Identity = 58/134 (43.28%), Postives = 94/134 (70.15%), Query Frame = 1
Query:   43 IEESDITRLPYLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTW-ENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLEDENMDME 441
            + E D+  + YL+AV+KETLRLHP +PL++P ++  DV++  + +P G  V +NAWAIGR+  TW  +   F PER L S +D++G++ EL+PFG+GRRICP +  A+ +  ++L +L++ FDW L +E+ + +
Sbjct:  333 VSEDDLQDMKYLKAVIKETLRLHPPLPLMVPHESTHDVKLRDYHIPAGTHVMINAWAIGREAATWGPDAEEFRPERHLNSYVDYRGQDTELVPFGAGRRICPAISFAVVLDEVVLANLVHQFDWTLPEESTEYQ 466          
BLAST of CX298308 vs. ExPASy Swiss-Prot
Match: C71AC_ARATH (Cytochrome P450 71A12 OS=Arabidopsis thaliana GN=CYP71A12 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 1.273e-31
Identity = 66/154 (42.86%), Postives = 96/154 (62.34%), Query Frame = 1
Query:   10 ELEQTIGK-GKTIEESDITRLPYLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTW-ENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLE----DENMDMEEKFG 453
            E+  TI   G  I+E D+  + YL+AV+KE  R+HP +PL+LPR    DV++ G+ +  G +V +NAWAI RD   W  +   F PER L S LD+ G++   IPFGSGRRICPG+ LA+ ++ + + +L+  FDW+ E     +  D+ E FG
Sbjct:  327 EIRSTIRPHGSYIKEKDVENMKYLKAVIKEVFRVHPPLPLILPRLLSEDVKVKGYNIAAGTEVIINAWAIQRDPAIWGPDAEEFKPERHLDSTLDYHGKDLNFIPFGSGRRICPGINLALGLVEVTVANLVGRFDWRAEAGPNGDQPDLTEAFG 480          
BLAST of CX298308 vs. ExPASy Swiss-Prot
Match: C71DD_MENPI (Cytochrome P450 71D13 OS=Mentha piperita GN=CYP71D13 PE=1 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 1.663e-31
Identity = 65/146 (44.52%), Postives = 94/146 (64.38%), Query Frame = 1
Query:   31 KGKTI-EESDITRLPYLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLED----ENMDMEEKFG 453
            KGKT  +  D+  L Y+++VVKET+R+HP +PL+ PR    + E+ G+ +P  A++ +N W++GR+ L WE P +F PERF   + DF G +FE IPFG+GRRICPGL   +  + + L  L+  FDWKL +     +MDM E  G
Sbjct:  336 KGKTDWDVDDVQELKYMKSVVKETMRMHPPIPLI-PRSCREECEVNGYTIPNKARIMINVWSMGRNPLYWEKPETFWPERFDQVSRDFMGNDFEFIPFGAGRRICPGLNFGLANVEVPLAQLLYHFDWKLAEGMNPSDMDMSEAEG 480          
BLAST of CX298308 vs. ExPASy Swiss-Prot
Match: C71AK_ARATH (Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=CYP71A20 PE=2 SV=2)

HSP 1 Score: 132.494 bits (332), Expect = 8.252e-31
Identity = 60/129 (46.51%), Postives = 88/129 (68.22%), Query Frame = 1
Query:   43 IEESDITRLPYLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTW-ENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLEDE 426
            + E +  ++ YLQAV+KE LRL P  PLL+PR    DV++ G+ +P G QV VNAWAI RD  TW  +   F PER L +NLDF+G++F+ IPFGSG+RICPG+     ++ + L +++  F+W+++ E
Sbjct:  340 VTEKEAEKMNYLQAVIKEALRLRPPAPLLVPRVLSEDVKLKGYNIPAGTQVIVNAWAIQRDTTTWGTDAEEFKPERHLDTNLDFQGQDFKFIPFGSGKRICPGIGFTSALIGVTLANIVKRFNWRMDVE 468          
BLAST of CX298308 vs. ExPASy Swiss-Prot
Match: C71AG_ARATH (Cytochrome P450 71A16 OS=Arabidopsis thaliana GN=CYP71A16 PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 8.252e-31
Identity = 61/128 (47.66%), Postives = 84/128 (65.62%), Query Frame = 1
Query:   43 IEESDITRLPYLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTW-ENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLED 423
            +   ++  + YL+AV+KE LRLHP +PLL+PR    DV++ G+ +  G QV +NAWAI RD  TW  +   F PER   S  DF GRNF+ IPFG+GRR+CPG+ L   M  + L +L+  FDW++ED
Sbjct:  339 VSGKEVENMNYLKAVIKEVLRLHPPLPLLVPRLLSEDVKLKGYDITAGTQVIINAWAIQRDTATWGSDAQEFRPERHFDSTWDFVGRNFKYIPFGAGRRLCPGIGLGSVMASVTLANLVKRFDWRVED 466          
BLAST of CX298308 vs. ExPASy Swiss-Prot
Match: C71D9_SOYBN (Cytochrome P450 71D9 OS=Glycine max GN=CYP71D9 PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 1.078e-30
Identity = 67/152 (44.08%), Postives = 92/152 (60.53%), Query Frame = 1
Query:   10 ELEQTIGKGKTIEESDITRLPYLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKL----EDENMDMEEKFG 453
            E+ +   K      S    L YL++VV ETLRLHP  PLLLPR+     EI G+ +P  ++V VNAWAIGRD   W     F PERF+  ++++K  +FE IPFG+GRR+CPGL   +  +  +L  L+  FDWKL    ++E++ M E FG
Sbjct:  327 EVRRVFDKEGRPNGSGTENLKYLKSVVSETLRLHPPAPLLLPRECGQACEINGYHIPAKSRVIVNAWAIGRDPRLWTEAERFYPERFIERSIEYKSNSFEFIPFGAGRRMCPGLTFGLSNVEYVLAMLMYHFDWKLPKGTKNEDLGMTEIFG 478          
The following BLAST results are available for this feature:
BLAST of CX298308 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 494
Match NameE-valueIdentityDescription
C7D95_MENSP7.464e-3244.52Cytochrome P450 71D95 OS=Mentha spicata GN=CYP71D9... [more]
C7D95_MENGR7.464e-3244.52Cytochrome P450 71D95 OS=Mentha gracilis GN=CYP71D... [more]
C82A2_SOYBN9.748e-3246.71Cytochrome P450 82A2 OS=Glycine max GN=CYP82A2 PE=... [more]
C71AD_ARATH9.748e-3242.86Cytochrome P450 71A13 OS=Arabidopsis thaliana GN=C... [more]
C71AO_ARATH1.273e-3143.28Cytochrome P450 71A24 OS=Arabidopsis thaliana GN=C... [more]
C71AC_ARATH1.273e-3142.86Cytochrome P450 71A12 OS=Arabidopsis thaliana GN=C... [more]
C71DD_MENPI1.663e-3144.52Cytochrome P450 71D13 OS=Mentha piperita GN=CYP71D... [more]
C71AK_ARATH8.252e-3146.51Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=C... [more]
C71AG_ARATH8.252e-3147.66Cytochrome P450 71A16 OS=Arabidopsis thaliana GN=C... [more]
C71D9_SOYBN1.078e-3044.08Cytochrome P450 71D9 OS=Glycine max GN=CYP71D9 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC06010G10SK RindPdig24 Citrus clementina cDNA clone C06010G10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX298308 ID=CX298308; Name=CX298308; organism=Citrus clementina; type=EST; length=455bp
GCAAGATTAGAGTTAGAACAAACGATTGGTAAAGGCAAAACAATTGAGGA
ATCAGACATCACTCGGTTACCTTATCTACAAGCAGTAGTCAAAGAAACCT
TGAGGCTGCACCCAGCAGTTCCCTTGTTACTTCCTCGTAAAGCTTTAGCC
GACGTAGAAATTGCGGGCTTCATAGTTCCAAAAGGAGCACAGGTTTTTGT
TAATGCGTGGGCAATTGGCAGAGATGAACTCACATGGGAGAACCCTCTTT
CTTTTATGCCTGAGAGATTCTTGGGGTCAAATCTCGATTTCAAAGGCAGA
AACTTTGAGCTGATCCCCTTTGGATCTGGCCGGCGAATATGTCCTGGTTT
GCCGTTGGCAATTAGAATGTTACATCTAATGTTGGGTTCACTCATTAACT
CCTTTGATTGGAAGCTGGAAGATGAGAACATGGATATGGAAGAAAAATTT
GGCAT
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