CX298315
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX298315 vs. ExPASy Swiss-Prot
Match: DCAM_DAUCA (S-adenosylmethionine decarboxylase proenzyme OS=Daucus carota GN=SAMDC PE=2 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 2.436e-39 Identity = 77/130 (59.23%), Postives = 97/130 (74.62%), Query Frame = 2 Query: 5 AEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALHSDIVGDEHGDTFMLDLKGYSCGEKIYEELGNNGSLIYYSFSR-ADCSTSPRSILKCCW 391 + ICDFEFDPCGYSMN++EG AVSTIH+TPEDGFSY+SFEAVGYD + V L+ L+ RVL CF+P EFS+AL +DI + T + +KGY EK EELG +GS++Y F + + SPRS+LKCCW Sbjct: 221 SRICDFEFDPCGYSMNAVEGPAVSTIHITPEDGFSYSSFEAVGYDPKSVNLSDLVARVLNCFQPGEFSIALQADIASELLEKTSSVHVKGYRVEEKTCEELGMDGSIVYQKFVKTTERCESPRSVLKCCW 350
BLAST of CX298315 vs. ExPASy Swiss-Prot
Match: DCAM_VICFA (S-adenosylmethionine decarboxylase proenzyme OS=Vicia faba GN=SAMDC PE=2 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 4.155e-39 Identity = 74/127 (58.27%), Postives = 93/127 (73.23%), Query Frame = 2 Query: 5 AEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALHSDIVGDEHGDTFMLDLKGYSCGEKIYEELGNNGSLIYYSFSRADCSTSPRSILKC 385 +EICDF+F+PCGYSMNS+EG AVSTIH+TPEDGFSYASFE GYD + + L ++ RVLACF+P EFSVA+H D +LD+KGY C EK ++ LG +GS++Y F +A SPRS LKC Sbjct: 219 SEICDFDFEPCGYSMNSVEGPAVSTIHITPEDGFSYASFETAGYDLKAMNLNEMVMRVLACFQPTEFSVAVHVDNASKSFEQGCLLDVKGYCCDEKSHQGLGMSGSVVYQKFVKASDCGSPRSTLKC 345
BLAST of CX298315 vs. ExPASy Swiss-Prot
Match: DCAM_PEA (S-adenosylmethionine decarboxylase proenzyme OS=Pisum sativum GN=SAMDC PE=2 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 5.426e-39 Identity = 73/127 (57.48%), Postives = 92/127 (72.44%), Query Frame = 2 Query: 5 AEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALHSDIVGDEHGDTFMLDLKGYSCGEKIYEELGNNGSLIYYSFSRADCSTSPRSILKC 385 +EICDF+F+PCGYSMNS+EG AVSTIH+TPEDGFSYASFE GYD + + L ++ RVLACF+P EFSVA+H D +LD+KGY C EK ++ LG +GS++Y F + SPRS LKC Sbjct: 219 SEICDFDFEPCGYSMNSVEGSAVSTIHITPEDGFSYASFETAGYDLKAINLNEMVMRVLACFQPTEFSVAVHVDNASKSFEQGCLLDVKGYCCEEKSHQGLGMSGSVVYQKFLKTSYCGSPRSTLKC 345
BLAST of CX298315 vs. ExPASy Swiss-Prot
Match: DCAM3_BRAJU (S-adenosylmethionine decarboxylase proenzyme 3 OS=Brassica juncea GN=SAMDC3 PE=2 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 5.426e-39 Identity = 75/133 (56.39%), Postives = 101/133 (75.94%), Query Frame = 2 Query: 2 EAEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALHSDIVGDEHGDTFMLDLKGYSCGEKIYEELG-NNGSLIYYSFSR-ADCSTSPRSILKCCWS 394 +++ICDFEF+PCGYSMNS+EGDA+STIHVTPEDGFSYASFEAVGYDF + L+ L+ RVL+CF+P +FSVA+HS + + + +DL+ Y C E+ +E LG +G+++Y +F + SPRS LKC WS Sbjct: 220 KSQICDFEFEPCGYSMNSVEGDAISTIHVTPEDGFSYASFEAVGYDFNTLDLSQLVTRVLSCFEPKQFSVAVHSSVGSNAYKPEISVDLEDYGCRERTFESLGEESGTVMYQTFEKLGKYCGSPRSTLKCEWS 352
BLAST of CX298315 vs. ExPASy Swiss-Prot
Match: DCAM2_ARATH (S-adenosylmethionine decarboxylase proenzyme 2 OS=Arabidopsis thaliana GN=SAMDC2 PE=2 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 7.835e-38 Identity = 77/134 (57.46%), Postives = 95/134 (70.90%), Query Frame = 2 Query: 2 EAEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALHSDIVGDEHGDTFMLDLKGYSCGEKIYEELG-NNGSLIYYSFSRAD--CSTSPRSILKCCWS 394 +++ICDFEF+PCGYSMNSIEGDA+STIHVTPEDGFSYASFEAVGYDF + L+ L+ +VL CFKP +FSVA+HS + + +DL Y C E E LG G+++Y F + C SPRS LKC WS Sbjct: 218 QSQICDFEFEPCGYSMNSIEGDAISTIHVTPEDGFSYASFEAVGYDFTTMDLSHLVSKVLTCFKPKQFSVAVHSTVAQKSYDSGLSVDLDDYGCKESTMESLGEERGTVMYQRFEKLGRYCG-SPRSTLKCEWS 350
BLAST of CX298315 vs. ExPASy Swiss-Prot
Match: DCAM2_BRAJU (S-adenosylmethionine decarboxylase proenzyme 2 OS=Brassica juncea GN=SAMDC2 PE=2 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.023e-37 Identity = 76/134 (56.72%), Postives = 97/134 (72.39%), Query Frame = 2 Query: 2 EAEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALHSDIVGDEHGDTFMLDLKGYSCGEKIYEELG-NNGSLIYYSFSRAD--CSTSPRSILKCCWS 394 +++ICDFEF+PCGYSMNS+EGDA+STIHVTPEDGFSYASFEAVGYDF + L+ L+ +VL CF+P +FSVA+HS + + +DL+ Y C E E LG G+++Y SF + C SPRS LKC WS Sbjct: 222 QSQICDFEFEPCGYSMNSVEGDAISTIHVTPEDGFSYASFEAVGYDFTTMDLSHLVSKVLTCFEPKQFSVAVHSSVAQKSYDSGLSVDLEDYGCRETTIELLGEERGTVMYQSFEKLGRYCG-SPRSTLKCEWS 354
BLAST of CX298315 vs. ExPASy Swiss-Prot
Match: DCAM2_DIACA (S-adenosylmethionine decarboxylase proenzyme 2 OS=Dianthus caryophyllus GN=SAMDC2 PE=2 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 4.299e-36 Identity = 75/135 (55.56%), Postives = 95/135 (70.37%), Query Frame = 2 Query: 2 EAEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALHSDIVGDEH--GDTFMLDLKGYSCGEKIYEELGNNGSLIYYSFSRAD---CSTSPRSILKCCW 391 ++ ICDF+F+PCGYSMN+IEG AVSTIH+TPEDGFSYASFEAVGYD +VV L L+ERVLACF+P EFS+A+H+D + +++ GYS E EELG GS+ Y F + C +P+ LKCCW Sbjct: 232 DSVICDFDFEPCGYSMNAIEGPAVSTIHITPEDGFSYASFEAVGYDLQVVDLNLLVERVLACFEPKEFSIAVHADTDTADKVLARNCSVNVIGYSREEGGIEELGLGGSVFYQKFCKGTAPVCPPAPKKTLKCCW 366
BLAST of CX298315 vs. ExPASy Swiss-Prot
Match: DCAM_SPIOL (S-adenosylmethionine decarboxylase proenzyme OS=Spinacia oleracea GN=SAMDC PE=2 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.251e-35 Identity = 71/135 (52.59%), Postives = 95/135 (70.37%), Query Frame = 2 Query: 2 EAEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALHSDIVGDEHGDTFMLDLKGYSCGEKIYEELG-NNGSLIYYSFSRAD----CSTSPRSILKCCW 391 +++ICDF+F+PCGYSMN+IEG A+STIH+TPEDGFSYASFEAVGYD + L L+ERVLACF+P+EFS+A+H++I + +++ GYS E EELG S+ Y F +A + P+ LKCCW Sbjct: 218 DSKICDFDFEPCGYSMNAIEGPAISTIHITPEDGFSYASFEAVGYDLKKTDLNQLVERVLACFEPSEFSIAIHAEIAANSMEHNCYVNVNGYSREEGGIEELGFGAASVFYQKFCKASTGFGATNKPKPALKCCW 352
BLAST of CX298315 vs. ExPASy Swiss-Prot
Match: DCAM1_DIACA (S-adenosylmethionine decarboxylase proenzyme 1 OS=Dianthus caryophyllus GN=SAMDC1 PE=2 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 7.103e-31 Identity = 65/129 (50.39%), Postives = 85/129 (65.89%), Query Frame = 2 Query: 2 EAEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALHSDIVGDEHGDTFMLDLKGYSCGEKIYEELGNNGSLIYYSFSRADCSTSPRSILKCC 388 ++ ICDF+F+PCGYSMN+IEG AVSTIH+TPEDGFSYASFEAVGYD ++V + L+ERVL CF+P EFS+A+ D +++ GY E E LG GS++Y F + + KCC Sbjct: 241 DSAICDFDFEPCGYSMNAIEGPAVSTIHITPEDGFSYASFEAVGYDLKIVDVNQLVERVLNCFQPREFSIAVSVDTADKVLEQYCAVNVAGYCREEGGVEGLGVGGSVLYQKFGKVATVSGLNKSPKCC 369
BLAST of CX298315 vs. ExPASy Swiss-Prot
Match: DCAM1_BRAJU (S-adenosylmethionine decarboxylase proenzyme 1 OS=Brassica juncea GN=SAMDC1 PE=2 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.525e-30 Identity = 60/97 (61.86%), Postives = 76/97 (78.35%), Query Frame = 2 Query: 2 EAEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALHSDIVGDEHGDT-FMLDLKGYSCGE 289 +++ICDFEF+PCGYSMNS+EGDA STIHVTPEDGFSYASFEAVGYDF + L+ L+ RVL CF+P +FSVA+HS + + + +DL+ Y C E Sbjct: 220 QSQICDFEFEPCGYSMNSVEGDASSTIHVTPEDGFSYASFEAVGYDFTTMDLSQLVSRVLTCFEPKQFSVAVHSSVAQKSYDHSGLSVDLEDYGCRE 316 The following BLAST results are available for this feature:
BLAST of CX298315 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
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Sequences
The
following sequences are available for this feature:
EST sequence >CX298315 ID=CX298315; Name=CX298315; organism=Citrus clementina; type=EST; length=690bpback to top |