CX298434

Overview
NameCX298434
Unique NameCX298434
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length716
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX298434 vs. ExPASy Swiss-Prot
Match: AK1C1_HUMAN (Aldo-keto reductase family 1 member C1 OS=Homo sapiens GN=AKR1C1 PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.783e-25
Identity = 71/192 (36.98%), Postives = 107/192 (55.73%), Query Frame = 1
Query:   67 DADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGISNY-----DIFLTRDCLAYSKVKPVVNQFETHPYFQRDSLVKFCQKHGICVTAHTPLGGAVANTEWFGTVS--CLDDPVLKGLAEKYKRTVAQIVLRWGIQRNTAVIPKTSKLERLEENFKVFDFELSKEDMDVIKSIDRKYRTNQPARFWGIDLFA 621
            D +G +  DT + L  TW A+E     GL +SIG+SN+     ++ L +  L Y   KPV NQ E HPYF +  L+ FC+   I + A++ LG       W    S   L+DPVL  LA+K+KRT A I LR+ +QR   V+ K+   +R+ +N +VF+F+L+ E+M  I  ++R        R+  +D+FA
Sbjct:  132 DENGKILFDT-VDLCATWEAVEKCKDAGLAKSIGVSNFNRRQLEMILNKPGLKY---KPVCNQVECHPYFNQRKLLDFCKSKDIVLVAYSALGSH-REEPWVDPNSPVLLEDPVLCALAKKHKRTPALIALRYQLQRGVVVLAKSYNEQRIRQNVQVFEFQLTSEEMKAIDGLNRN------VRYLTLDIFA 312          
BLAST of CX298434 vs. ExPASy Swiss-Prot
Match: XYL1_KLULA (NAD(P)H-dependent D-xylose reductase OS=Kluyveromyces lactis GN=XYL1 PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.747e-25
Identity = 62/180 (34.44%), Postives = 103/180 (57.22%), Query Frame = 1
Query:   67 DADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGISNYDIFLTRDCLAYSKVKPVVNQFETHPYFQRDSLVKFCQKHGICVTAHTPLGGA----VANTEWFGTVSCLDDPVLKGLAEKYKRTVAQIVLRWGIQRNTAVIPKTSKLERLEENFKVFD-FELSKEDMDVIKSIDRKYRTNQP 591
            +A G +E +  + L  TW A+E LV  G ++S+GISN+   L +D L  +++KPV  Q E HPY  ++ L+K+ +  GI V A++  G      + N +   T +  +   +K +A K+K T  Q++LRW  Q   A+IPK+SK ERL +N ++ D   L+ +++  I  +++  R N P
Sbjct:  139 EAKGHIE-EEQVPLLDTWRALEKLVDQGKIKSLGISNFSGALIQDLLRGARIKPVALQIEHHPYLTQERLIKYVKNAGIQVVAYSSFGPVSFLELENKKALNTPTLFEHDTIKSIASKHKVTPQQVLLRWATQNGIAIIPKSSKKERLLDNLRINDALTLTDDELKQISGLNQNIRFNDP 317          
BLAST of CX298434 vs. ExPASy Swiss-Prot
Match: XYL1_PICST (NAD(P)H-dependent D-xylose reductase OS=Pichia stipitis GN=XYL1 PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.200e-25
Identity = 64/172 (37.21%), Postives = 95/172 (55.23%), Query Frame = 1
Query:  115 TWHAMEDLVSMGLVRSIGISNYDIFLTRDCLAYSKVKPVVNQFETHPYFQRDSLVKFCQKHGICVTAHTPLGG----AVANTEWFGTVSCLDDPVLKGLAEKYKRTVAQIVLRWGIQRNTAVIPKTSKLERLEENFKVFDFELSKEDMDVIKSIDRKYRTNQPARFWGIDLF 618
            TW A+E LV  G +RSIG+SN+   L  D L  + +KP V Q E HPY Q+  L++F Q  GI VTA++  G      +       T    ++  +K +A K+ ++ AQ++LRW  QR  A+IPK++ + RL EN  V  F+L ++D   I  +D   R N P  +  I +F
Sbjct:  146 TWKALEKLVKAGKIRSIGVSNFPGALLLDLLRGATIKPSVLQVEHHPYLQQPRLIEFAQSRGIAVTAYSSFGPQSFVELNQGRALNTSPLFENETIKAIAAKHGKSPAQVLLRWSSQRGIAIIPKSNTVPRLLENKDVNSFDLDEQDFADIAKLDINLRFNDPWDWDKIPIF 317          
BLAST of CX298434 vs. ExPASy Swiss-Prot
Match: YOF5_CAEEL (Uncharacterized oxidoreductase ZK1290.5 OS=Caenorhabditis elegans GN=ZK1290.5 PE=2 SV=3)

HSP 1 Score: 114.005 bits (284), Expect = 8.097e-25
Identity = 62/157 (39.49%), Postives = 85/157 (54.14%), Query Frame = 1
Query:  109 ETTWHAMEDLVSMGLVRSIGISNYDIFLTRDCLAYSKVKPVVNQFETHPYFQRDSLVKFCQKHGICVTAHTPLGGAVANTEWFGTVSCLDDPVLKGLAEKYKRTVAQIVLRWGIQRNTAVIPKTSKLERLEENFKVFDFELSKEDMDVIKSIDRKYR 579
            E TW  ME L     VRSIG+SNY I    + L ++ + P  NQ E HP+F +  L  +C + GI    + PL               L+D  L  +A KY+++ AQI LRW IQ+N   +PK++   RL+EN  VFDFELS EDM+ + S   + R
Sbjct:  122 EKTWRQMELLYEDEHVRSIGVSNYSIEDLDELLEFASILPHANQVELHPWFHQADLKNYCDELGILTMGYCPLAKG----------KYLEDETLCKIASKYQKSPAQICLRWSIQQNVPTVPKSTDCRRLKENTNVFDFELSAEDMNTLNSFSSQNR 268          
BLAST of CX298434 vs. ExPASy Swiss-Prot
Match: AK1D1_RAT (3-oxo-5-beta-steroid 4-dehydrogenase OS=Rattus norvegicus GN=Akr1d1 PE=1 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 8.097e-25
Identity = 67/167 (40.12%), Postives = 99/167 (59.28%), Query Frame = 1
Query:  103 SLETTWHAMEDLVSMGLVRSIGISNY-----DIFLTRDCLAYSKVKPVVNQFETHPYFQRDSLVKFCQKHGIC-VTAHTPLGGAVANTEWFGTVS--CLDDPVLKGLAEKYKRTVAQIVLRWGIQRNTAVIPKTSKLERLEENFKVFDFELSKEDMDVIKSIDRKYR 579
            +L  TW A+E     GLV+S+G+SN+     ++ L +  L Y   KPV NQ E HPYF +  L++         + A++PLG    N  W    S   L D +L  L +KY +T AQIVLR+ IQR   VIPK++  ER++ENF++FDF L+KE+M  I+++++  R
Sbjct:  145 NLCATWEALEACKDAGLVKSLGVSNFNRRQLEVILNKPGLKY---KPVTNQVECHPYFTQTKLLEVSASSMTSFIVAYSPLG-TCRNPLWVNVSSPPLLKDELLTSLGKKYNKTQAQIVLRFDIQRGLVVIPKSTTPERIKENFQIFDFSLTKEEMKDIEALNKNVR 307          
BLAST of CX298434 vs. ExPASy Swiss-Prot
Match: P100_LEIMA (Probable reductase OS=Leishmania major GN=P100/11E PE=2 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 1.058e-24
Identity = 62/155 (40.00%), Postives = 83/155 (53.55%), Query Frame = 1
Query:  115 TWHAMEDLVSMGLVRSIGISNYDIFLTRDCLAYSKVKPVVNQFETHPYFQRDSLVKFCQKHGICVTAHTPLGGAVANTEWFGTVSCLDDPVLKGLAEKYKRTVAQIVLRWGIQRNTAVIPKTSKLERLEENFKVFDFELSKEDMDVIKSIDRKYR 579
            +W A E L     VR+IG+SN+ I    D LA   V P+VNQ E HP   +  L  FC    I V A +PLG              L +P+L  +  KY +T AQ++LRW IQ+N   IPK+   ER+EEN  +FDFEL  ED+  I +++   R
Sbjct:  130 SWRAFEQLYKEKKVRAIGVSNFHIHHLEDVLAMCTVTPMVNQVELHPLNNQADLRAFCDAKQIKVEAWSPLGQG----------KLLSNPILSAIGAKYNKTAAQVILRWNIQKNLITIPKSVHRERIEENADIFDFELGAEDVMSIDALNTNSR 274          
BLAST of CX298434 vs. ExPASy Swiss-Prot
Match: XYL1_PACTA (NAD(P)H-dependent D-xylose reductase OS=Pachysolen tannophilus GN=XYL1 PE=1 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.381e-24
Identity = 65/177 (36.72%), Postives = 97/177 (54.80%), Query Frame = 1
Query:   73 DGVLEIDTTISLETTWHAMEDLVSMGLVRSIGISNYDIFLTRDCLAYSKVKPVVNQFETHPYFQRDSLVKFCQKHGICVTAHTPLGG----AVANTEWFGTVSCLDDPVLKGLAEKYKRTVAQIVLRWGIQRNTAVIPKTSKLERLEENFKVFDFELSKEDMDVIKSIDRKYRTNQP 591
            DG   I   + +  TW AME+LV  GLV+SIG+SN    L  D +  +++KP   Q E HPY Q++ LV++ Q  GI VT ++  G      + N     T    ++  +  +A K+ +T  Q++LRW  QR  A+IPK++    L  N  V +F+L+KED + I  +DR  R N P
Sbjct:  132 DGDKFIYEDVPIIETWRAMENLVDEGLVKSIGVSNVSGGLLEDLIKAARIKPASLQIEHHPYLQQNKLVEYAQLKGIVVTGYSNFGPLSFLELGNETAKKTQPLYENKTITTIAAKHGKTPFQVLLRWVNQRGIAIIPKSTFPNTLAVNLHVDEFDLTKEDFEEIAKLDRHLRFNDP 308          
BLAST of CX298434 vs. ExPASy Swiss-Prot
Match: DHB5_MOUSE (Estradiol 17 beta-dehydrogenase 5 OS=Mus musculus GN=Akr1c6 PE=1 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.381e-24
Identity = 66/175 (37.71%), Postives = 98/175 (56.00%), Query Frame = 1
Query:   67 DADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGISNYDIFLTRDCLAYS--KVKPVVNQFETHPYFQRDSLVKFCQKHGICVTAHTPLGGAVANTEWFGTVS--CLDDPVLKGLAEKYKRTVAQIVLRWGIQRNTAVIPKTSKLERLEENFKVFDFELSKEDMDVIKSIDRKYR 579
            D +G L  D  + +  TW AME     GL +SIG+SN++       L     K KPV NQ E HPY  +  L+ FC+   I + A++ LG      +W    S   LD+PVL  +A+KY RT A I LR+ +QR   V+ K+   +R++EN +VF+F+L+ EDM V+  +++  R
Sbjct:  132 DENGKLIYDA-VDICDTWEAMEKCKDAGLAKSIGVSNFNRRQLEKILKKPGLKYKPVCNQVECHPYLNQGKLLDFCRSKDIVLVAYSALGSH-REKQWVDQSSPVLLDNPVLGSMAKKYNRTPALIALRYQLQRGVVVLAKSFSEKRIKENMQVFEFQLTSEDMKVLDDLNKNIR 304          
BLAST of CX298434 vs. ExPASy Swiss-Prot
Match: DTDH_MUCMU (4-dihydromethyl-trisporate dehydrogenase OS=Mucor mucedo GN=tdh PE=1 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 4.019e-24
Identity = 60/171 (35.09%), Postives = 98/171 (57.31%), Query Frame = 1
Query:  118 WHAMEDLVSMGLVRSIGISNYDIFLTRDCLAYSKVKPVVNQFETHPYFQRDSLVKFCQKHGICVTAHTPLG--GAVANTEWFGT-VSCLDDPVLKGLAEKYKRTVAQIVLRWGIQRNTAVIPKTSKLERLEENFKVFDFELSKEDMDVIKSIDRKYRTNQPARF-WGIDLF 618
            W  +E +V  GL R+IG++N++     D L Y+++KP V Q E HPY  ++ LVK+ ++ GI +TA++  G    V  TE   T  S L+   +K +A+K+  +  Q++LRW + R  AVIPK+    R++ N ++ D +L  ED   + S+    R N P  + +G+ LF
Sbjct:  150 WAELEKIVDAGLARNIGVANFNCQAILDLLTYARIKPAVLQIELHPYLPQERLVKWVKEQGIQITAYSSFGPTSYVDLTESGKTYTSLLEHASVKSVADKHNVSTGQVLLRWALDREFAVIPKSVNAGRMKANLEILDIKLDAEDNKTLDSLKTNQRFNDPMTYGFGLPLF 320          
BLAST of CX298434 vs. ExPASy Swiss-Prot
Match: AKC1H_MOUSE (Aldo-keto reductase family 1 member C18 OS=Mus musculus GN=Akr1c18 PE=2 SV=2)

HSP 1 Score: 111.694 bits (278), Expect = 4.019e-24
Identity = 69/180 (38.33%), Postives = 98/180 (54.44%), Query Frame = 1
Query:   67 DADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGISNY-----DIFLTRDCLAYSKVKPVVNQFETHPYFQRDSLVKFCQKHGICVTAHTPLGGA----VANTEWFGTVSCLDDPVLKGLAEKYKRTVAQIVLRWGIQRNTAVIPKTSKLERLEENFKVFDFELSKEDMDVIKSIDRKYR 579
            D  G L  DT + L  TW AME     GL +SIG+SN+     ++ L +  L Y   KPV NQ E H Y  +  L+ +C+ + I + A+  LG        N +   T   LDDPVL  +A+KYKRT A I LR+ + R    + K+   ER+ EN +VFDF+L+ +DM ++  +DR  R
Sbjct:  132 DEHGNLIFDT-VDLCDTWEAMEKCKDAGLAKSIGVSNFNRRQLEMILNKPGLKY---KPVCNQVECHLYLNQSKLLAYCKMNDIVLVAYGALGTQRYKYCINED---TPVLLDDPVLCAMAKKYKRTPALIALRYQLDRGIVALAKSFNEERIRENMQVFDFQLASDDMKILDGLDRNLR 304          
The following BLAST results are available for this feature:
BLAST of CX298434 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 129
Match NameE-valueIdentityDescription
AK1C1_HUMAN2.783e-2536.98Aldo-keto reductase family 1 member C1 OS=Homo sap... [more]
XYL1_KLULA4.747e-2534.44NAD(P)H-dependent D-xylose reductase OS=Kluyveromy... [more]
XYL1_PICST6.200e-2537.21NAD(P)H-dependent D-xylose reductase OS=Pichia sti... [more]
YOF5_CAEEL8.097e-2539.49Uncharacterized oxidoreductase ZK1290.5 OS=Caenorh... [more]
AK1D1_RAT8.097e-2540.123-oxo-5-beta-steroid 4-dehydrogenase OS=Rattus nor... [more]
P100_LEIMA1.058e-2440.00Probable reductase OS=Leishmania major GN=P100/11E... [more]
XYL1_PACTA1.381e-2436.72NAD(P)H-dependent D-xylose reductase OS=Pachysolen... [more]
DHB5_MOUSE1.381e-2437.71Estradiol 17 beta-dehydrogenase 5 OS=Mus musculus ... [more]
DTDH_MUCMU4.019e-2435.094-dihydromethyl-trisporate dehydrogenase OS=Mucor ... [more]
AKC1H_MOUSE4.019e-2438.33Aldo-keto reductase family 1 member C18 OS=Mus mus... [more]

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Properties
Property NameValue
Genbank descriptionC06012B08SK RindPdig24 Citrus clementina cDNA clone C06012B08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX298434 ID=CX298434; Name=CX298434; organism=Citrus clementina; type=EST; length=716bp
TCTACCTCGTCCATTTTCCTGTAGCCACAACAACACACTGGCGTTGGTAC
AACTGATAGTGCATTAGATGCGGATGGTGTGCTGGAGATAGACACAACTA
TATCATTGGAAACAACCTGGCATGCAATGGAGGATTTGGTTTCAATGGGT
TTAGTTCGAAGCATTGGGATCAGCAACTATGACATCTTTTTAACAAGAGA
CTGCTTAGCTTACTCCAAAGTGAAGCCGGTGGTGAATCAGTTTGAAACTC
ACCCATACTTCCAACGTGATTCTCTTGTCAAGTTCTGTCAGAAGCATGGG
ATATGTGTCACAGCTCATACTCCTCTAGGAGGTGCCGTAGCCAACACTGA
ATGGTTCGGTACTGTCTCATGTTTGGATGACCCCGTTTTGAAAGGTCTAG
CTGAGAAATACAAGAGGACTGTGGCCCAGATTGTTCTCAGGTGGGGCATC
CAACGGAACACAGCTGTCATCCCGAAGACGTCAAAGCTTGAGAGACTGGA
AGAGAATTTCAAAGTTTTTGACTTTGAGCTGAGCAAAGAAGACATGGATG
TGATTAAGAGCATTGACAGAAAATATCGAACCAACCAGCCTGCTAGGTTT
TGGGGCATAGATCTGTTTGCTTAAGTATGCTCATTGTTCTGGATAAGAAT
GTTTCTATGAGTTCAAAAATAAGTGATCAAACGTCCTTGATGTGTTTTAG
TATTAAAACATTTTAT
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